New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	2991102 =	72 (1.450)	3 (0.060)	3/262	NT	4.2%	pseudogene (1086/1137 nt)	ygeQ	pseudogene
	?	CP009273	2991140 =	69 (1.460)					pseudogene (1048/1137 nt)	ygeQ	pseudogene

AATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTC  >  CP009273/2990954‑2991248                                                                                                                                                     |                                                                                                                                                    aatcaTCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTTAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCATTGAAAGATTTGTAGGataaata                                                                                                                                                     >  1:545127/1‑149 (MQ=255) aatcaTCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACAATTAATCCTTTAATCTGGTGTTTATCTTTGAAAGATTTGTAGGataaata                                                                                                                                                     >  1:397826/1‑149 (MQ=17)  atcatcTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGataaataa                                                                                                                                                    <  1:81689/149‑1 (MQ=255)   tcatcTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAAc                                                                                                                                                   <  1:862356/149‑1 (MQ=255)          ctacgcgaagctaaagtcaatgaactggatgaaactctttcaacaacgaggttgaaccacctcatagataaaggttatgaaagaataacgttacggcttgatttagggggagattccccaggttgtctggaaaaagataaacataccag                                                                                                                                            <  1:336628‑M1/10‑6 (MQ=255)            ctcCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTaa                                                                                                                                         >  2:713180/1‑149 (MQ=255)                aaTGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCTGTATAATTTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGTTTTGTTGGATAAATAACATTA‑AGTAAAGcc                                                                                                                                     >  1:507236/1‑149 (MQ=21)                          cTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCtt                                                                                                                           >  2:405524/1‑149 (MQ=255)                          cTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGAGAAATAACATTA‑AGTAAAGCCGCATCGGCtt                                                                                                                           >  2:652271/1‑149 (MQ=255)                           tAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTC‑ATTAAAGCCGCGTCGGATtc                                                                                                                          >  1:221309/1‑149 (MQ=255)                           tAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTtc                                                                                                                          >  1:630092/1‑149 (MQ=255)                           tAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCGTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTtc                                                                                                                          >  1:571197/1‑149 (MQ=255)                             aaaaCTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTtctc                                                                                                                        >  1:259234/1‑149 (MQ=255)                             aaaaCTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTtctc                                                                                                                        >  1:777845/1‑149 (MQ=255)                                     tATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGt                                                                                                                <  1:221847/149‑1 (MQ=255)                                     gatgaaactctttcaacaacgaggttgaaccacctcatagataaaggttatgaaagaataacgttacagcttgatttagggggagaatccccaggttatctggaaaaagataAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGt                                                                                                                >  1:514810‑M1/113‑149 (MQ=255)                                       ttAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCCTCGGCCTCTCTGTAATGttt                                                                                                              >  2:233358/1‑149 (MQ=255)                                       ttAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGttt                                                                                                              >  1:147926/1‑149 (MQ=255)                                       ttAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGttt                                                                                                              >  1:767260/1‑149 (MQ=255)                                          acctcgttcaaaaacgaggttgaaccacctcatagataaaggttatgaaagaataacgttacagcttgatttagggggagaatccccaggttatctggaaaaagataAACATTACAGAGAAGCCGCATCGGCTTCTCTGTAATGTTTAt                                                                                                            >  1:84427‑M1/108‑149 (MQ=255)                                             cTATCACTTATTTTAGTGATATTGGTGGTCTGGAGATTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTTTTTGATTTGTATCATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCttt                                                                                                        <  2:514777/149‑1 (MQ=37)                                             cTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCttt                                                                                                        <  1:661012/149‑1 (MQ=255)                                              tctCACTTATTTAAGTGATATTGGTTGGCTGGAGATTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTTTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCtttt                                                                                                       <  2:233733/147‑1 (MQ=255)                                              tATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATCTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCtttt                                                                                                       <  1:49925/149‑1 (MQ=255)                                              tATCACTTATTTAAGTGATATTGGTGGTCTGGAGATTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGTTAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCtttt                                                                                                       <  2:28853/149‑1 (MQ=255)                                                tCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTc                                                                                                     >  1:55549/1‑149 (MQ=255)                                                tCACTTATTTAAGAGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTc                                                                                                     >  1:604267/1‑149 (MQ=255)                                                 ttgttATTTGAGTGTTATGGGTTGTCTGGAGATTCAGGTGGCCAGTCTAATCTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTcc                                                                                                    <  1:677595/146‑1 (MQ=255)                                                 cACTTATGTAAGGGATATTGGTTTGCTGGAGATTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTcc                                                                                                    <  1:677705/149‑1 (MQ=255)                                                  aCTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCa                                                                                                   >  1:389065/1‑149 (MQ=255)                                                  aCTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGACTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCa                                                                                                   <  2:722820/149‑1 (MQ=255)                                                           aGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTg                                                                                          >  2:19572/1‑149 (MQ=255)                                                           aGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTg                                                                                          >  2:19579/1‑149 (MQ=255)                                                               atatTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGa                                                                                      <  2:540137/149‑1 (MQ=255)                                                                   tGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATtct                                                                                  <  2:837251/149‑1 (MQ=255)                                                                    ggTTGTCGGGAGGTTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTACTGTTTATCTTTTTCCAGATAACCTGGGGATtctc                                                                                 <  2:681757/149‑1 (MQ=255)                                                                    ggTTGGCTGGAGATTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATtctc                                                                                 <  1:430733/149‑1 (MQ=255)                                                                     gTTGACTGGAGATTCAGCGGGTCAGTCTAAACTTGCTCTTTTCTTCTGGTGTCTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTcc                                                                                <  1:686058/149‑1 (MQ=255)                                                                      ttGTCTGGAGATTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTccc                                                                               <  2:78218/149‑1 (MQ=255)                                                                      ttGTCTGGAGATTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTCTATCTTTTTCCAGATAACCTGGGGATTCTccc                                                                               <  1:405474/149‑1 (MQ=255)                                                                       tGTCTGGAGATTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTcccc                                                                              >  2:797036/1‑149 (MQ=255)                                                                       tGTCTGGAGATTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTcccc                                                                              <  1:17127/149‑1 (MQ=255)                                                                        gtatGGAGCTTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTccccc                                                                             >  1:322551/4‑149 (MQ=255)                                                                         tCTGGAGATTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCt                                                                            >  1:422742/1‑149 (MQ=255)                                                                         tCTGGAGATTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCt                                                                            <  2:619933/149‑1 (MQ=255)                                                                           tGGAGATTCAGGGGGCCAGTCTACACTTGCTCTTTTCTTATGGTGTTTATCTTTGAAAGATTTGTAGGATCAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCAGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCTaa                                                                          >  1:252142/1‑149 (MQ=255)                                                                            ggAGATTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCTaaa                                                                         >  2:515163/1‑149 (MQ=255)                                                                            ggAGATTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCTaaa                                                                         <  2:799471/149‑1 (MQ=255)                                                                                aTTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTTTCCCCTTAAATCaa                                                                     >  1:796664/1‑149 (MQ=255)                                                                                  tCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGc                                                                   <  2:513946/149‑1 (MQ=255)                                                                                       gggCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTTGGGCTTCTCCCCCTAAATCAAGCTGTaa                                                              >  1:756027/1‑149 (MQ=255)                                                                                            aGTCTAAACTTGCTCTTGTCTGCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTa                                                         <  2:194860/149‑1 (MQ=255)                                                                                             gTCTACACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGACTCTCCCCCTAAATCAAGCTGTAACGTTAt                                                        <  1:590173/149‑1 (MQ=255)                                                                                                 aagcTTGCTGTTTTAATATGGTAATTATCCTTGCAAGCTTTATAGAAAAAATAATATTA‑GATAAAGCCTCATCGGTTTCTCTGTAATATTTATGTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCtt                                                    <  1:723257/146‑1 (MQ=255)                                                                                                  aaCTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCttt                                                   <  2:44191/149‑1 (MQ=255)                                                                                                   aCTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTc                                                  <  1:111287/149‑1 (MQ=255)                                                                                                    cTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCa                                                 >  2:159882/1‑149 (MQ=255)                                                                                                        ctctTTTCTTCTTGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAAc                                             <  1:797787/149‑1 (MQ=255)                                                                                                        ctctTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAAc                                             <  1:713180/149‑1 (MQ=255)                                                                                                           ttttCTTCTGGTGTTTATCTTTGAAAGATTTGCAGGATAAATCACATTA‑CGTAAAGCAGCATCGGCTTCTCTGTGATGTTAAGCTTTTTCCAGATAACTTGCGGATCCTCCCGCGAAATCAATCGGTTACGTTATTCTTTCATAACCtt                                          >  1:206931/1‑149 (MQ=255)                                                                                                           ttttCTTCTGGTGTTTATATTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCAAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATaccgtt                                          >  1:625216/1‑144 (MQ=255)                                                                                                              tcttctGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTAt                                       <  2:349515/149‑1 (MQ=255)                                                                                                                   tGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATg                                  >  1:495861/1‑149 (MQ=255)                                                                                                                     gtgtTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAg                                <  2:312848/149‑1 (MQ=255)                                                                                                                        tttATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAggtg                             >  2:20477/1‑149 (MQ=255)                                                                                                                        tttACCTTTGAAACATTTGGAGGCTAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTCATGTTTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAggtg                             <  2:369112/149‑1 (MQ=255)                                                                                                                          tATCTTTGAAAGATTTGTAGGATATATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAggtggt                           >  2:645609/1‑149 (MQ=255)                                                                                                                          tATCTTTGAAAGATTTGTAGGATAGATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAggtggt                           >  2:645486/1‑149 (MQ=255)                                                                                                                           aTCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAGGTGGtt                          >  2:384209/1‑149 (MQ=255)                                                                                                                              tttGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCaa                       >  2:554827/1‑149 (MQ=255)                                                                                                                                  aaaGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTc                   >  1:814084/1‑149 (MQ=255)                                                                                                                                   aaGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCg                  >  2:472133/1‑149 (MQ=255)                                                                                                                                     gATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCgtt                <  2:492265/149‑1 (MQ=255)                                                                                                                                           gaaaaagataAACATTACAGAGAAGGCGATGCGGCTTTACT‑TAATGTGTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGaa          <  2:487445‑M1/139‑1 (MQ=255)                                                                                                                                            aGGATAAATAACATTA‑AGTAAAGCCGCATCGGTTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGaaa         <  2:397826/149‑1 (MQ=255)                                                                                                                                            aGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGTGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGaaa         <  1:159916/149‑1 (MQ=255)                                                                                                                                            aGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGaaa         <  1:20484/149‑1 (MQ=255)                                                                                                                                            aGGATAAATAACATGA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAGGTGGTTTAACCTCGTTGTTGaaa         <  2:545127/149‑1 (MQ=255)                                                                                                                                              gATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGAAaga       <  1:19579/149‑1 (MQ=255)                                                                                                                                              gATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGAAaga       <  1:19572/149‑1 (MQ=255)                                                                                                                                                  aataaCATTA‑AGTAAAGCCGCATCGGCTTCTCTGAAATGTTTATCTATTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGttt   >  1:648918/1‑149 (MQ=255)                                                                                                                                                   ataaCATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGCTAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTc  >  1:116400/1‑149 (MQ=255)                                                                                                                                                   ataaCATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATCACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTc  <  2:604267/149‑1 (MQ=255)                                                                                                                                                   ataaCATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTc  <  2:55549/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                    AATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACTTGCTCTTTTCTTCTGGTGTTTATCTTTGAAAGATTTGTAGGATAAATAACATTA‑AGTAAAGCCGCATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTC  >  CP009273/2990954‑2991248

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.