| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,420,353 | A→T | 67.3% | intergenic (‑86/+135) | hisJ ← / ← argT | histidine/lysine/arginine/ornithine transporter subunit/lysine/arginine/ornithine transporter subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,420,353 | 0 | A | T | 67.3% | 81.7 / 55.0 | 75 | intergenic (‑86/+135) | hisJ/argT | histidine/lysine/arginine/ornithine transporter subunit/lysine/arginine/ornithine transporter subunit |
| Reads supporting (aligned to +/- strand): ref base A (13/11); new base T (26/23); total (39/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.54e-01 | |||||||||||
AACGCCGCAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGTAGA > CP009273/2420206‑2420501 | aaCGCCGCAGTTGCGCTGGCGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCaaaa < 2:796226/149‑1 (MQ=255) gccgcAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTTTTTTTGTTTTCAACTGACAGTCTTTTTATAGGGATTATTTGGTGGTTTGTTACACTTATCGTGCCATTAAATTGTCCATCAAGGCAGAatat > 1:666439/1‑149 (MQ=255) gccgcAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAatat > 2:621479/1‑149 (MQ=255) cAGTTGCGCTGGAGCAGGCGAGAACCAGAGAGAGCGATAGAACCAGTTTTTTTCTAAGGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCg < 2:197567/149‑1 (MQ=255) cgcTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGGCAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGt > 2:581321/1‑149 (MQ=255) cgcTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTTCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGt > 2:67815/1‑149 (MQ=255) gcTGGAGAAGACCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGtt > 2:283210/1‑149 (MQ=255) tGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAg < 2:776136/149‑1 (MQ=255) gagaAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACATATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGAc < 1:361946/149‑1 (MQ=255) gCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGtatta > 2:575983/1‑149 (MQ=255) gCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGtatta > 2:353909/1‑149 (MQ=255) ccAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATATTGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTATTACACTTATCTTGCCAGAACATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGttttat > 1:526472/1‑149 (MQ=255) cAGAACCAGAGAGAGCGATAGCACCAGTTTTTTTTTTTTTTTTTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATTGTGCCTTTAAATTGACCATCAAGGAAATAAATCCAGCACCGTTAGActttttttt > 1:134789/1‑141 (MQ=255) cAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTCTCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGTCGTattatt > 1:691219/1‑149 (MQ=255) gAACCAGTGAGAGCGATACCACCAGTTTTTTCATTATGTCCTCCACTGACAGTCTTTTTATAGGGAAGATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTAtttt < 2:54387/149‑1 (MQ=255) gAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTAtttt < 1:323125/149‑1 (MQ=255) cAGAGAGAGCGATAGCACCAGTTTTTTTTTTTTTTTTTCAACAGAAAGCCGCCTTAGAGAGAATATTAACAGGCTTGATACACTAATCGTGCCATAACATTGACCACCAAGGCAATATAACCCGCCCCGTTAGACGTATTATTTTCCAt > 1:861970/1‑149 (MQ=255) agagagCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑aa > 2:326087/1‑149 (MQ=255) agCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAAt < 2:777783/149‑1 (MQ=255) agCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTGATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTCGACGTATTATTTTTCATT‑AAAAAt < 2:777728/149‑1 (MQ=255) agCGATAGCACCAGTTTTTTCAATATGTCCTCAACTGACAGTTTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAAt < 2:500840/149‑1 (MQ=255) cGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGc < 1:98522/149‑1 (MQ=255) aTAGCACCAGTTTTTTCATAATGTCCTCAACTGACATTCTTTTTATAGGGAATTTTTACAGGTTTGTTACACTTATCGTGACATAAAATTGGCCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCtt < 2:376843/149‑1 (MQ=255) cACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCTTGCACTAAAATTGACCATCAAGCCAAAATATCCCGCCCCGTTAGACGTCTAATTTTACATT‑AAAAATGCTTAAGt > 2:445538/1‑149 (MQ=255) cACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTGTTATTTTTCATT‑AAAAATGCTTAAgg > 2:445430/1‑148 (MQ=255) ttttttCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGACATAAAATTGACCATCAAGGCAATATATCCCGCCCCCTTAGACGTATTATTTTTCATT‑AAAAAGACTTAAGTaggaat > 1:344200/1‑144 (MQ=255) tttttCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGGCGGATTATTTTTCATT‑AAATATGCTTAAGTAGGCAtt > 2:272828/1‑149 (MQ=255) aTAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATg > 1:289700/1‑149 (MQ=255) aTAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGGTTGGTACACGTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATg > 2:817739/1‑149 (MQ=255) gTCCTCAACTTACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTCCATT‑TACATTTTTTAAGTATGCATTGAAATGcatac < 1:405608/149‑4 (MQ=255) tCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCACGAt > 1:674957/1‑149 (MQ=255) tCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCACGAt > 1:474288/1‑149 (MQ=255) tCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCACGAt > 1:19800/1‑149 (MQ=255) cAAATGACAGTCTTTTTATAGGGAATATTTCAAAGTTTTGTACAATTATCCTTCCATAAAAATGGCCATCAAGGCAATAAATTCCGCCCCGGTAGACCTAATAATTTTCATTAAAAAATGCTTAAGTATGCATTTCAATGCACCACGAt < 2:152065/149‑1 (MQ=255) aCTGACAGTCTTTTTATAGGGAATATTTACATGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATGcaccaggggagt < 1:149766/149‑8 (MQ=255) aCAGTCTTTTTATAGGGTATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCTCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGcaa < 2:260795/149‑1 (MQ=255) aCAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGcaa < 2:688744/149‑1 (MQ=255) aCAGTCTTTTTAGAGGGAATTTTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGcaa < 2:617392/149‑1 (MQ=255) aCAGTCTTTTTAGAGGGAATATTTACAGGTCTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATACACCCCGCCACCCTAGACGTATTATTTTAAAAA‑AAAAATGCTTAAGCATATATTTCAATTCACCACGATAGTGcaa < 1:726290/149‑1 (MQ=255) aCAGGCTTTTTTTAGGTAGTTTTTACAGGTTTGTTACACTTAGCGTGCAATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTGCATT‑ATAAATGCTTCAGTATGCATTTCAATGCACCACGATAGTGcaa < 1:271916/149‑1 (MQ=255) gTCTTGTCAGAGGCAATATTTACAGGTTTGTTACACTTATCGTTCCAAAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGcaacaa < 2:134789/149‑1 (MQ=255) tCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACaaa > 2:427978/1‑149 (MQ=255) cTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCCCGATAGTGCAATAAAc > 2:283665/1‑149 (MQ=255) tttttATAGGGAATATTTACAGGTTTGTAACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAAcc > 2:524877/1‑149 (MQ=255) gctaggtaactattACCGGTTTCTCACCGTTATCGTCCCTCAAAGTTGTCCCGCAATGCAACATATCCCGCCCCGTTCGACGTATTATTTTTCATT‑AAAAACGCTTAAGTATGCATTTCTATGCTCGACGCTAGTGCAACTAGCCTGGc < 1:491625/137‑1 (MQ=255) ggAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCa > 2:843852/1‑149 (MQ=255) ggAATATTTACAGGTTTGTTACACTTATCGTGACCTGCAGAGAACCGTCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCACGATCGTGCAACAAACCTGGCGTGCa > 2:424495/1‑149 (MQ=255) gtatatTTACATGTTTGTTAAACTTATCGTGCCATAAAATTGCCCATCAAGGCAATATATCCCGCCCCTTTAGAAGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCAc < 1:384721/147‑1 (MQ=255) tatTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCat < 1:283210/149‑1 (MQ=255) tatTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACATATTATTTAGTTTT‑ATAAAGTCTGTAGTTTGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCat > 1:526622/1‑149 (MQ=255) atTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCACCAAACCTGGCGTGCACCatg > 2:178689/1‑149 (MQ=255) cccggTTTGTTCCACTTACCGGGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCAtgatga < 1:155316/146‑1 (MQ=255) caagttctGTTACACTTACCGGGCCATAAAAGTGACCACCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCAtgatga < 2:419858/142‑1 (MQ=255) tttttACGCTTATCGTGCCATAAAATTGACCATCAAGGCAATTTATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACATACCTGGCGTGCACCATGATGATCATTc < 2:240750/146‑1 (MQ=255) ttACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCAt < 2:801951/149‑1 (MQ=255) acacTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCCCGATAGTGCAACAAACCTGGCGTGCACCCTGCTGGTCATTCCATCa > 1:63953/1‑149 (MQ=255) acTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAgg < 2:111546/149‑1 (MQ=255) gTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCt > 2:737932/1‑149 (MQ=255) ccATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTGATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTcc < 1:508008/149‑1 (MQ=255) ccATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTcc < 1:251978/149‑1 (MQ=255) ccATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTcc > 1:153610/1‑149 (MQ=255) ccAAAACATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGCATGCATTTCAATGCACCACGATAGTGCAACAAACCCGGTGTGCACCATGATGTTCACTCCATCAGGTACAGCTTcc < 1:795325/149‑1 (MQ=255) tAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCATGCACCATGCTGATCATTCCATCAGGTACCGCTTccccg > 2:194233/1‑147 (MQ=255) tAAAATTGACCATCAAGGCAATATATCCCGCCCCGATAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAg > 1:541410/1‑149 (MQ=255) aaTTGACCATCAAGGCAATATATCCCGCCCCGTTCGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAGTGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGTTCATTCCATCAGGTAAAGCTTCCCAGCGa > 2:558159/1‑149 (MQ=255) aaTTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGa > 2:241989/1‑149 (MQ=255) aTTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGAc < 1:453260/149‑1 (MQ=255) ttGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACg > 2:576988/1‑149 (MQ=255) aCCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTAt < 1:850978/149‑1 (MQ=255) caacAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCa < 2:278154/146‑1 (MQ=255) cATCCAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTCCCTC‑AAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCCACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCa < 2:69321/149‑1 (MQ=255) cATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAACATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATAATGATCAGTAAACCAGGCACAGCTTCCCAGCGACgcacca > 1:397453/1‑144 (MQ=255) cATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCa < 1:671945/149‑1 (MQ=255) aTCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCGCAGCGACGTATCAg > 2:444635/1‑149 (MQ=255) tCAAGTCAATATCTCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCTGCGACGTATCAGt < 1:242739/149‑1 (MQ=255) cAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCTATCAGGTACAGCTTCCCCGCGACGTATAAGTCCCCGt > 2:10140/1‑149 (MQ=255) aaTACCCCCCCCCGTTACACATATTATTTTGCATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGTAGa < 1:353909/149‑1 (MQ=255) | AACGCCGCAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATT‑AAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGTAGA > CP009273/2420206‑2420501 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |