| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 1092750 | 65 (0.400) | 22 (0.140) | 10/280 | 18.4 | 29.2% | intergenic (+465/+271) | ycdU/serX | putative inner membrane protein/tRNA‑Ser |
| ? | CP009273 | = 1092911 | 45 (0.290) | intergenic (+626/+110) | ycdU/serX | putative inner membrane protein/tRNA‑Ser | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
TGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCG > CP009273/1092603‑1092898 | tgtgtgCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGt < 2:1900719/149‑1 (MQ=32)tgtgtgCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGt < 2:2444461/149‑1 (MQ=32) gtgtgCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTc < 2:2327106/149‑1 (MQ=32) cAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAAcc > 1:892122/1‑149 (MQ=32) aaTACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAAccc < 2:137725/149‑1 (MQ=32) tACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCg < 2:1979251/149‑1 (MQ=32) tACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCg < 2:39949/149‑1 (MQ=32) cacGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAATGATGGCGGTGAGGGGGGGATTGACTCGCTTCGCGCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGt < 1:1252427/149‑1 (MQ=2) cACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGCGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑g > 2:174890/1‑149 (MQ=11) tccgCGTTCCCGCTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCACCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTATTTAAATCTGTCGGTGAGGGGGGGATT‑Ga < 1:1354039/146‑1 (MQ=11) aCTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑Ga < 1:1540942/149‑1 (MQ=31) cTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTCCTTTCGTACGCGCTCTTCTTTAAATATGGCGGGGAGGGGGGGGttaga > 1:282199/1‑146 (MQ=1) cTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑gcc > 1:660692/1‑147 (MQ=11) tGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑gcga > 1:462219/1‑146 (MQ=11) tGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACt < 2:660692/149‑1 (MQ=32) tGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGGGAGGGGGGGATT‑GACt > 2:525241/1‑149 (MQ=17) gCGTTCACGGTCGGTCCAACTGGCGGTCGCCAGTTGTCGGGCCGCGGTGGGGGCTTCTCATGCCCCGGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTTAGAGCCCAACAATAAATATGGCGGTGAGGGGGGGATT‑GACtc < 2:2642265/149‑1 (MQ=11) ttCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCCGTCCTTTGGTCCGGGCCCTCTTTTAAATGGGGCGGTGGGGGGGGGATT‑ggactcc > 1:2074671/1‑143 (MQ=11) ttCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACtcgct < 2:1045745/149‑1 (MQ=34) ttCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACtcgct > 2:1123676/1‑149 (MQ=35) ttCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTGTCGTATTAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GAcccccc > 1:2556204/1‑144 (MQ=255) ccACGGCCCGTCCAACCGGCCGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGGGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAggggggttcgaatcccccc < 2:752964/148‑14 (MQ=1) gTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTGAATATGGCGGGGAGGGGGGGAtttgctcccccgccac > 1:544417/1‑135 (MQ=11) gTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTtcgctc > 2:948808/1‑149 (MQ=35) gTCTGCCCAACTGGCTGTCTCCAGTTGTCGAACCCCGGTCGGGGCTGCTCAGCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTtcgctc < 1:1306507/149‑1 (MQ=255) tCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTtcgctcg < 1:1759824/149‑1 (MQ=35) cTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGACAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGTT‑GACTCGCTtcgctcgc > 2:1306507/1‑149 (MQ=25) cTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTtcgctcgc < 2:1738936/149‑1 (MQ=34) cTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTtcgctc > 2:934799/1‑147 (MQ=35) cTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTtcgctc < 1:934799/147‑1 (MQ=35) cTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCGTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTtcgctcgc < 2:256150/149‑1 (MQ=25) tGTCCAACTGGTTGTCGCCAGTTGTCGATCCCGGGTCGGGGCTGCGCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGcc < 1:525241/149‑1 (MQ=11) tGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGcc < 1:386765/149‑1 (MQ=34) tCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATACCCCCGGTGTGTTCAATATACGAAGAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGAGGTGAGGGGGGGATTCGACtccgccatccgtggt > 1:619314/1‑136 (MQ=11) ccAACTGGCTGTCGCCAGTTGTCGATCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATAGGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTg > 2:1336701/1‑149 (MQ=17) caactggcgacagCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTTAATATGGCGGTGGAGGGGGGATT‑GACTCGCGTCGCTCGCCCTGc > 2:179571/13‑149 (MQ=11) cAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGc > 1:2066649/1‑149 (MQ=35) cAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGCGTGTACAATATACGTAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGc > 1:1422078/1‑149 (MQ=255) aactggcgacagCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCg > 2:2383761/12‑149 (MQ=255) aaCTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCg > 2:2041725/1‑149 (MQ=35) aaCTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCGGCg > 1:1681055/1‑149 (MQ=25) aaCTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGGGAGGGGGGGGTT‑GAACCGCTTAGCTCGCCCTGCg > 2:2539213/1‑149 (MQ=11) aCTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATGTACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCGCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GGCACGCTTGGCGCGCGCttggg > 2:716560/1‑145 (MQ=11) aCTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCgg < 1:349432/149‑1 (MQ=34) cTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTTTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCggg < 2:1181478/149‑1 (MQ=21) gCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACtcgcttcgc < 1:378440/134‑1 (MQ=34) gCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACtcgcttcgc > 2:378440/1‑134 (MQ=34) gCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCGGGCAg < 1:1702898/149‑1 (MQ=34) cTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACtcgcttcg < 2:2327250/132‑1 (MQ=35) cTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACtcgcttcg > 1:2327250/1‑132 (MQ=37) cTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCGGGCAGc < 2:73035/149‑1 (MQ=34) gTCGCCAGTTGTCGAACCGAGGTCGGGGCTTCTGATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTTGCTTCGCTCGCCCTGCGGGCAGcct > 2:1959200/1‑148 (MQ=255) gTCGCCAGTTGTCGAACCCCGGTCGGGGCTGCTCGTCCCCGCGGCGTGTGGAATATACGAAAACAAAG‑GCGGTACGTTCGTAGGAGCTCCTCTTTAAATATGGAGGAGAGGGGGGGGTT‑GACTCGCTTCGCTGGCCCTGCGGGCAGtcc > 1:1792112/1‑149 (MQ=17) tCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCGGCGGGCAGCCCg < 2:1681055/149‑1 (MQ=25) tCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GAATCGCTTCGCTCGCCCTGCGAGCAGCCCg > 2:2556373/1‑149 (MQ=25) gCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGGGGGGGGGATT‑CGAGCGCTTCGCTCGCCCTCCGGGCAGCCCGCt > 2:357552/1‑149 (MQ=11) gCCAGTTGTCGAACCCCGGTCGGGGCGTCTCATCCCCCCGGTGTGTGCAATATACGAGCAAAAAG‑CCCGTACTTTCGTACCAGCTCTTCTTTAAATATGGCGGTGAGGGGGAGATT‑GACCCGCTTCGCTCGCCGTGCAGGCAGGCCGCt > 1:2097277/1‑149 (MQ=11) ccAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGCGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTc > 1:673383/1‑149 (MQ=21) ccAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GCCTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTc > 1:1399185/1‑149 (MQ=25) ccAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTc > 1:2391575/1‑149 (MQ=34) ccAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTc > 2:375937/1‑149 (MQ=35) ccAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTc > 1:1998417/1‑149 (MQ=35) aGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCAc > 2:1023343/1‑149 (MQ=35) gTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACt < 1:1123676/149‑1 (MQ=34) gTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGGGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCg > 2:1770489/1‑149 (MQ=25) | TGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAG‑CCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCG > CP009273/1092603‑1092898 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |