New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 = 3641487127 (0.780)13 (0.090) 12/274 16.8 10.1% intergenic (‑339/‑401) dinQ/arsR UV‑inducible membrane toxin, DinQ‑AgrB type I toxin‑antitoxin system/arsenical resistance operon transcriptional repressor; autorepressor
?CP009273 = 3641492 114 (0.760)intergenic (‑344/‑396) dinQ/arsR UV‑inducible membrane toxin, DinQ‑AgrB type I toxin‑antitoxin system/arsenical resistance operon transcriptional repressor; autorepressor
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 126 total aligned reads displayed.

GATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCAGCTGAAGAAATCGCTAATTCTTGCAATGTTAGCCACTGGCT  >  CP009273/3641345‑3641638
                                                                                                                                                    |                                                                                                                                                  
   aaTCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCg                                                                                                                                                >  2:20837/1‑149 (MQ=255)
      cATACAGGACATGTAGGTTATAAAACCAGCACGTCCTTTCAATCGTTTCGGTACGGCTGTAGCATTGTTGCGTTAGACTATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtt                                                                                                                                             <  1:297762/149‑1 (MQ=21)
       aTACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGAAGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAACACCGACGCAAAGTCGGttt                                                                                                                                            >  2:1612764/1‑149 (MQ=255)
        tACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtttt                                                                                                                                           >  2:664715/1‑149 (MQ=255)
         acagtaacgtcAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGttttt                                                                                                                                          <  2:912375/139‑1 (MQ=255)
         aCAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGttttt                                                                                                                                          <  1:1487724/149‑1 (MQ=255)
           aGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTCGCTGATGGCTATCTCACGCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAGAACGGACGCGCAGTCgccttattt                                                                                                                                        >  2:104540/1‑141 (MQ=37)
             tACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTAc                                                                                                                                      >  2:805156/1‑149 (MQ=255)
             tACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTAc                                                                                                                                      >  1:16294/1‑149 (MQ=255)
             tACATGCAGGTTATAAAACCAGCACGTCATTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTAc                                                                                                                                      >  2:1603124/1‑149 (MQ=255)
              acgtGCTGGTTTTATAACCTGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACa                                                                                                                                     >  2:2207888/4‑149 (MQ=25)
                  gCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCg                                                                                                                                 >  1:2387002/1‑149 (MQ=255)
                      ggtataAAACCAGCACGTCCTTGCAATAGTGTGAGTATGGTATTAGCATTGATGCGTTAGGTGATGGCTATCTCGCTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGAtt                                                                                                                             <  1:287701/147‑1 (MQ=255)
                       ttATAAAACCAGCACGCCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTAGCTCACTCCAGTCAGAGCCCCCACCTCA‑TGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTc                                                                                                                            <  2:520850/149‑1 (MQ=37)
                          taAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGa                                                                                                                         <  2:1793235/149‑1 (MQ=255)
                           aaaaCCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGAc                                                                                                                        >  1:2336719/1‑149 (MQ=255)
                            aaaCCAGCACGTCCTTGCAATAGTGTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACa                                                                                                                       >  2:1980391/1‑149 (MQ=255)
                               tcAGCACGTCCTTGAAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAgg                                                                                                                    <  2:1055964/148‑1 (MQ=255)
                               ccAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAgg                                                                                                                    <  2:2624948/149‑1 (MQ=255)
                               ccAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAgg                                                                                                                    >  2:1548546/1‑149 (MQ=255)
                               ccAGCACGTCCTTGCAATAGCTTCAGTCTGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGGCACCAACCCA‑GGGCCGGCAAGTAAAAAACCGACGCCAAGTCGCCTCTTTTACCTCCAGaaacaccacagg                                                                                                                    >  1:507927/1‑138 (MQ=255)
                               ccAGCACCGCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGTTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTATATCCGGATTCGGACAAgg                                                                                                                    <  1:1717026/149‑1 (MQ=255)
                                    aCGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTaa                                                                                                               <  1:657017/149‑1 (MQ=255)
                                    aCGTCCTTGCAATAGTTTCAGTATGGGATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACCCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTaa                                                                                                               <  2:56586/149‑1 (MQ=255)
                                     cGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGAGGCGTTAGATGATGGCTAGCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAat                                                                                                              <  1:1084020/149‑1 (MQ=255)
                                         cTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGa                                                                                                          >  2:308734/1‑149 (MQ=255)
                                          ttGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGAc                                                                                                         >  2:2285427/1‑149 (MQ=255)
                                          ttGCAATAGTTTCAGTATGGTATTAGCATTGATGCCTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGAc                                                                                                         <  2:1017397/149‑1 (MQ=255)
                                           tGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACg                                                                                                        <  1:1932907/149‑1 (MQ=255)
                                           tGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCCGATTCGGACAAGGCTTAATATGACg                                                                                                        <  2:1335474/149‑1 (MQ=255)
                                             cAATAGTTTCAGCATCGTATTAGCACTGATTCGTCAGCTGATGGCTATCTCACTACAGACATAGTCACCAACTCT‑GGGCTGGAAAGTAAAGAACCGACGCAAAGTCGGTTTGTTTCAATCCGGATTCGGACAAGGGTTAATCTGACGag                                                                                                      >  1:1279844/1‑148 (MQ=21)
                                              aaTAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACCAGCCTTCAAATGACGAtc                                                                                                     >  1:205840/1‑148 (MQ=255)
                                              aaTAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAGGGCTTAATATGACGATg                                                                                                     >  2:2179873/1‑149 (MQ=255)
                                              aaTAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATg                                                                                                     >  1:776736/1‑149 (MQ=255)
                                               cgagggtCAGTTTGTTATTAGCATTTTTGCGTTCGATGATGGCTATCTCACTCCAGGCAGAGCCACCAGCTCA‑GGGCAGGAAGGTGAAAACGCGACGGAACGTCGGTTTTTTTACATTCGGATTCGGAGCTGGGTTAAGGTGACGATgt                                                                                                    <  1:569334/143‑2 (MQ=255)
                                               aTAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGa                                                                                                    <  2:656112/149‑1 (MQ=255)
                                                 attttCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGAcc                                                                                                  <  2:209917/147‑1 (MQ=255)
                                                 aGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGAcc                                                                                                  <  2:327592/149‑1 (MQ=255)
                                                   ttccAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACGTCCTGATTca                                                                                                                           <  2:577534/119‑2 (MQ=255)
                                                    ttcaagaTGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAg                                                                                               >  1:992968/7‑149 (MQ=255)
                                                     tCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCCCCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGt                                                                                              <  2:339174/149‑1 (MQ=255)
                                                     tCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGt                                                                                              >  1:891440/1‑149 (MQ=255)
                                                      cAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCTGTGATGGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTg                                                                                             <  2:508555/149‑1 (MQ=255)
                                                         tATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGATAAGGCTTAATATGACGATGACCCAGTGaaa                                                                                          <  2:810077/149‑1 (MQ=255)
                                                              tATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGttttttt                                                                                                                                        >  2:648268/1‑98 (MQ=255)
                                                              tATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGttttttt                                                                                                                                        <  1:648268/98‑1 (MQ=255)
                                                               atgaGCAGTGATGCGTTTGAGTGTCGCGACCTCACTCCATTCAGAGCCACAATCTCC‑GGGCTGGAAACTAAAAACCCGCCGCACAGGCTGTTTTTTTACATCCGGAGTCGGACAAGGCTTAATATGACGATGACCGAGTGAAAGtatat                                                                                    <  1:2662106/146‑1 (MQ=255)
                                                               aTTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGtatat                                                                                    <  1:1980391/149‑1 (MQ=255)
                                                                 tAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATaa                                                                                  >  1:1047491/1‑149 (MQ=255)
                                                                   gCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATaaa                                                                                 >  1:2429335/1‑149 (MQ=255)
                                                                    cATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGCTTCGGGCAAGGCGAAATATGACGATGACCCAGTGAAAGTATATAAATc                                                                               >  2:2488055/1‑149 (MQ=255)
                                                                     aTTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACGTCCGGATTCGGACAGGGCTTAATATGACGAGGAACCTGTGAATGTATATACAttg                                                                              >  1:1460340/1‑147 (MQ=21)
                                                                        gATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCCAAGTCGGTTTTTTTACATCCGGGTTCGGACAAGGCTTAATATGACGATGACCCACGGAGAGTATATAAAGCTTCa                                                                           >  2:1322347/1‑149 (MQ=25)
                                                                        gATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCa                                                                           <  2:704219/149‑1 (MQ=255)
                                                                              ttAGATGATGGCTATCTCACTCCAGTCAGAGTCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACACCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGa                                                                     <  2:1784460/149‑1 (MQ=255)
                                                                              ttAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACGTCCGGATTCGGACAAGCCTTAAAATGACTATCACCCTGTAAAAGTATACAAAttgccattccgt                                                                     >  1:2341937/1‑138 (MQ=18)
                                                                              tcagagGATCGCTGTCTCGCTCCAGTCAGAGCCACCCACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACAGCGa                                                                     <  2:1982753/147‑1 (MQ=25)
                                                                                  atgatgGCTATCTCACTCCAGCCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtttttt                                                                                                                                         <  1:1975323/77‑1 (MQ=255)
                                                                                  atgatgGCTATCTCACTCCAGCCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtttttt                                                                                                                                         >  2:1975323/1‑77 (MQ=255)
                                                                                    gatgGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGAtatata                                                               <  2:352433/149‑1 (MQ=255)
                                                                                    gagtgccaTCTCACGCCAGGCAGAGACACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGAtatata                                                               <  1:664715/142‑1 (MQ=25)
                                                                                     atgGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATAc                                                              <  1:2025802/149‑1 (MQ=255)
                                                                                          caTCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAg                                                         <  2:1110615/148‑1 (MQ=255)
                                                                                           aTCTCACTCCAGTCAGAGCCACCAAGTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCTGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGt                                                        <  1:1903582/149‑1 (MQ=255)
                                                                                           aTCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGt                                                        <  1:361060/149‑1 (MQ=255)
                                                                                            tctcACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTg                                                       <  2:469238/149‑1 (MQ=255)
                                                                                             ctcACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGc                                                      <  2:2622275/149‑1 (MQ=255)
                                                                                              tcACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATTAATCGTCACTGCGATATATACCGAAGTGct                                                     <  1:1902451/149‑1 (MQ=255)
                                                                                              tcACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGct                                                     <  2:2291000/149‑1 (MQ=255)
                                                                                                aCTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctcc                                                   >  1:1088929/1‑149 (MQ=255)
                                                                                                   ccAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGAAATTTACCGAAGTGctccctc                                                >  1:870178/1‑149 (MQ=255)
                                                                                                    cAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctccctcc                                               >  2:1204652/1‑149 (MQ=255)
                                                                                                     aagcAGGGCCACCAACTAA‑GGGATGCAAATGAAAAAACCGACGCAAAGTCGTTTTTTTTACATCCGTAGTCTGACAAGGTTTAATATAACGATGACCCAGTGAAAGAATATAACTCGTCACTTCGATATATACCGAAGTGCTCCCTCCg                                              <  1:96980/146‑1 (MQ=255)
                                                                                                      gTCAGAGCCCCCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGc                                             <  2:761947/149‑1 (MQ=255)
                                                                                                      gTCAGAGCCACCAACGCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGc                                             <  1:2168236/149‑1 (MQ=255)
                                                                                                       tCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtttttt                                                                                                                                         >  1:622796/1‑56 (MQ=31)
                                                                                                           agCCACCCACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCCACGTCGTGCCGCCGCCAGCt                                        <  1:1642957/149‑1 (MQ=37)
                                                                                                           agCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCAGCt                                        >  1:2406589/1‑149 (MQ=255)
                                                                                                             ccaccaACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGTATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCAGCTga                                      <  2:1319884/149‑1 (MQ=255)
                                                                                                             ccaccaACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCAGCTga                                      >  2:2415785/1‑149 (MQ=255)
                                                                                                             ccaccaACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACCGCGATATATACCGAAGTGCTCACGCCGCCAGCTgg                                      >  2:213001/1‑148 (MQ=255)
                                                                                                              caccaACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCAGCTgaa                                     <  1:805156/149‑1 (MQ=255)
                                                                                                              caccaACTCA‑GGGCTGGAAAGCAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATATATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCAGCTgaa                                     <  2:1850698/149‑1 (MQ=255)
                                                                                                                   aCTCA‑GGGCTGGAAAGTAAAAAACCGACGCAACGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCAGCTGAAGAAAt                                <  1:1463496/149‑1 (MQ=255)
                                                                                                                       a‑GGGCTGGAAAGTAAAAACCCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCAGCTGAAGAAATCGCt                            <  2:727521/149‑1 (MQ=255)
                                                                                                                          ggCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAACGCGCAGAGAGCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCAGCTGAAGAAAACGCTaa                          >  2:623232/1‑149 (MQ=38)
                                                                                                                            cTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTATTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCGACTGAAGAAATCGCGAAtt                        >  2:1708169/1‑149 (MQ=255)
                                                                                                                                  aGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCAGCTGAAGAAATCGCTAATTCTTGCa                  >  1:430105/1‑149 (MQ=255)
                                                                                                                                  aGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCAGCTGAAGAAATCGCTAATTCTTGCa                  >  2:1648184/1‑149 (MQ=255)
                                                                                                                                      aaaaaCCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCAGCTGAAGAAATCGCTAATTCTTGCAATGt              <  2:175459/149‑1 (MQ=255)
                                                                                                                                      aaaaaCCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCAGCTGAAGAAATCGCTAATTCTTGCAATGt              <  2:776736/149‑1 (MQ=255)
                                                                                                                                        gacccGATGCTACGTCGTTTGTTTTATACCCGGATTCGGACAAGGCTTAATATGCCGCTGCCCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCAGCTGAAGAAATCGCTAATTCTTGCAATGTTa            <  1:1392145/146‑1 (MQ=255)
                                                                                                                                        aaaCCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATGAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCAGCTGAAGGAATCGCTAATTCTGGCAATGTTa            >  2:2027554/1‑149 (MQ=255)
                                                                                                                                        aaaCCGACGCAAAGTCGGTTTTTTTACATCCGGATTCCGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCAGCTGAAGAAATCGCTAATTCTTGCAATGTTa            <  2:529676/149‑1 (MQ=255)
                                                                                                                                          aCCGACGCAAAGTCGGTTTTTTCACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCAGCTGAAGAAATCGCTAATTCTTGCAATGTTAGc          <  2:1050238/149‑1 (MQ=255)
                                                                                                                                           ccGACGCAAAGTCGGTTTTTTTACATTCTGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCAAAGTGCTCCCTCCGCCAGCTGAAGAAATCGCTAATTCTTGCAATGTTAGcc         >  1:2589252/1‑149 (MQ=255)
                                                                                                                                            cGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCAGCTGAAGAAATCGCTAATTCTTGCAATGTTAGCCa        >  2:2354368/1‑149 (MQ=255)
                                                                                                                                            cGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAATATATAAATCGTCACTGCGATATCTACCGAAGTGCTCCCTCCGCCAGCTGAAGAAATCGCTAATTCTTGCAATGTTAGCCa        >  1:2144865/1‑149 (MQ=255)
                                                                                                                                            cGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGAGAAATTATATAAATCGTCACTGCGATATCTACCGAAGTGCTCCATCCCCCAACTGATTAAATCGCTAATCCTTGCAATGGTAGcga        >  1:19352/1‑147 (MQ=255)
                                                                                                                                                  aaaGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCAGCTGAAGAAATCGCTAATTCTTGCAATGTTAGCCACTGGCt  >  1:1582065/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
GATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCA‑GGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCCGCCAGCTGAAGAAATCGCTAATTCTTGCAATGTTAGCCACTGGCT  >  CP009273/3641345‑3641638

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.