| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4532507 | 154 (0.950) | 16 (0.100) | 12/278 | 17.0 | 10.1% | intergenic (+57/‑425) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) |
| ? | CP009273 | = 4532803 | 141 (0.920) | intergenic (+353/‑129) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 157 total aligned reads displayed.
TCTGTGGCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGG > CP009273/4532656‑4532950 | tCTGTGGCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAAt > 1:1211188/1‑149 (MQ=255) cTGTGGCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATg > 1:1518537/1‑149 (MQ=255) tgtgGCTCGACTCATCTTCCTCCTTTTTCTCTCCAAAAACCACCTCATGCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATTTTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATgg < 1:1230008/149‑1 (MQ=255) tgtgGCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTGTGA‑GTCCAAATgg > 2:1009073/1‑149 (MQ=255) gtgGCTCCACGCATCTTCCTTATTCTTCTCTCCAAAAACCACCTTATGCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGCCATAGTTTCTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGc < 1:456886/149‑1 (MQ=255) gtcgCTCCACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCC‑ATATATACATCTATAAATAAACACACCAATAGAATATTAAGTCTATAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGc < 1:827537/146‑1 (MQ=255) tgGCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGcc < 2:176251/149‑1 (MQ=255) tgGCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCCATGA‑GTCAAAATGccc > 1:1846811/1‑149 (MQ=255) gCTCGACGCATCTTCCTCATTCTTCACTCCAAAAACCACCTCATGCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGcccc < 1:1670960/149‑1 (MQ=255) cGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGt < 1:286252/149‑1 (MQ=255) tcATCTTCCTCAATCTACACACAAAAAACCACCTCATGCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGtt < 1:903687/148‑1 (MQ=255) gCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCATACAAATAAACGGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGtt < 1:2560991/149‑1 (MQ=255) aTCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTc < 2:1493074/149‑1 (MQ=255) ttccctcctTCTTCACCCCCAAACACACCTCATGCA‑ATAAAAACAACTAAACATAAAGATAACAATAGAACATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAACTGTTTCAt < 1:471953/146‑1 (MQ=255) ttCCTCATTCTTCTCTCCAAAAACCACCTCATGCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCACCAAATGTTTCATc > 1:2003599/1‑149 (MQ=255) ttCCTCATTCTTCTCTCCAAAAACCACCTCATGCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATACTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATc > 1:2155219/1‑149 (MQ=255) ttCCTCATTCTTCTCTCCAAAAACCACCTCATGCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGAGATGCTTTCCTCTATGA‑GTCAAAATGGCCGAAAATGTTTctta > 1:41436/1‑146 (MQ=255) cTCATTCTTCTCTCCAAAAACCACCTCATGCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAACTGTTTCATCttt > 2:299000/1‑149 (MQ=255) cTCATTCTTCTCTCCAAAAACCACCTCATGCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCttt > 2:2611338/1‑149 (MQ=255) cTCATTCTTCTCTCCAAAAACCACCTCATGCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCttt > 2:2089801/1‑149 (MQ=255) cTCATTCTTCTCTCCAAAAACCACC‑AACACAGGAATGAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCttt > 2:1303624/1‑149 (MQ=255) tCATTCTTCTCTCCAAAAACCACCTCATGCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCtttt < 2:1308496/149‑1 (MQ=255) ttcttcTCTCCAAAAACCACCTCATGCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTGGTA‑GGCAAAATGGCCCCAATTGtcttgtatttattt < 1:1234287/149‑14 (MQ=255) ttcatcTCGGCAAATACCACCTCATTCG‑ATATTAACATCGATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTggg > 1:246505/1‑149 (MQ=255) tcttctCTCCAAAAACCACCTCATGCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTgggg < 2:2051660/149‑1 (MQ=255) tcttctCGCCAAAAACCACCTCATGCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTgggg < 1:2606841/149‑1 (MQ=255) tctcCAAAAACCACCTCATGCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGaaaa < 2:292757/149‑1 (MQ=255) ctcCAAAAACCACCTCATGCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCAGCTTTTGGGGGaaaca > 2:1211094/1‑147 (MQ=255) tcCAAAAACCACCTCATGCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCGTCTTTTGGGGGAAAACt > 2:753874/1‑149 (MQ=255) tcCAAAAACCACCTCATGCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTGTGGGGGCAAACt > 2:2354407/1‑149 (MQ=255) tcCAAAAACCACCTCATGCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAAAGGCCCCAAATGTTTCATCCTTTGGGGGAAAACt > 1:147799/1‑149 (MQ=255) cAAAAACCACCTCATGCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACtgt < 2:2249517/149‑1 (MQ=255) cAAAAACCACCTCATGCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACtgt > 1:384298/1‑149 (MQ=255) aaaaaCCACCTCATGCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACggtg > 1:1430041/1‑149 (MQ=255) aaaaaCCACCTCATGCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATAGTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACggtg > 1:1432773/1‑149 (MQ=255) acccaccTCATGCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAATTTGTCCGCTATGCTTTCCTCGATGA‑GTCAAAAGGGCCCCAAATGGTTAATTTCTTGGGGGAAAACttggcat > 1:621937/3‑143 (MQ=255) aaCCACCTCATGCA‑ATATAAACATCTATAAATAAAGATCACAATAGAATATTAAGCCAACAAATACACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATAA‑GCCAAAATGGCCCCAAATGGTTCATCTCTTCGGGGCAAGCTGGGCAg > 2:161014/1‑149 (MQ=255) ccTCATGCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACAGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGACAACTTTGCAGGGTTg > 2:1782543/1‑149 (MQ=255) tCATGCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGc > 2:1113437/1‑149 (MQ=255) tCATGCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATG‑ATTAAAGTAGCAGGGCGAAATGGCCCCAAATGTTTCATCCTTTGGGGGAACACTGTGCAGTGTTGGc > 2:621665/1‑149 (MQ=255) aTGCA‑ATATAAACATCTAACAATAAAGATAACAGTAGAATATTACGCCATCATATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTTGGGGAAAACTGTGCAGTGTTGGCaa > 2:1958266/1‑148 (MQ=255) tGCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGATTGTCCGCGATGCTTTCCTGTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTATGGGGGAAAAATGTGCAGTGTTGGGAGt > 2:1802083/1‑149 (MQ=255) gCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTc > 1:1002072/1‑149 (MQ=255) gctatatAAACATCTATAAATAAAGATAACAATGGAATATTAAGCAAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCCATGA‑GTCAAAATGGTCCCAAATGTTTCCTCTTTTGGGGGAATACTGTGCAGTGTTGGCAGTc < 1:1394958/146‑1 (MQ=255) cA‑ATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCa < 2:668531/149‑1 (MQ=255) aCATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGtt < 1:1186388/149‑1 (MQ=255) aTCTATAAAGAAAGATAACAACAGAATATTAAGCCAACAAATAAACTGAAAACGTTTGTCCGCGATGCTTTCCGCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTa < 2:2023944/149‑1 (MQ=255) tataAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTCAAAAAGTTAGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTGTCATCATTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCATTTacaa > 1:794228/1‑149 (MQ=255) taataatgaaTATAACAACAGAATAGTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTAGGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaa < 1:1646431/145‑1 (MQ=255) ataaataaAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaaa > 2:1113195/1‑149 (MQ=255) aaataaaGATAACAATAGAATATTACGCCACCAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCGGGGTTGGCAGACAAACCCGTTTacaaaac > 2:1380664/1‑149 (MQ=255) aaataaaGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaaaac > 2:917468/1‑149 (MQ=255) taaaGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCCGTGATGGCAGTCAAACTCGTTTacaaaacaaa < 1:1901144/149‑1 (MQ=255) taaaGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaaaacaaa < 2:444483/149‑1 (MQ=255) aaaGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCATATGTTTCATCTTTTGGGGGAAAACTATGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAg < 2:1727633/149‑1 (MQ=255) aaaGAGAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACCCGTGTACAAAACAAAg < 1:1640835/149‑1 (MQ=255) aaGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAgt < 2:384298/149‑1 (MQ=255) gATAACAATAGAATATTAAGCAAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAgtgt > 1:347203/1‑149 (MQ=255) aaCAATCGAATATTAAGCCACCAAGTAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTGTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACa < 1:2663667/149‑1 (MQ=255) aaTAGAATATTAAGCCAACAAATAAACTGACAAAGTCGAACAGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGaa > 2:1300291/1‑149 (MQ=255) aaTAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGaa < 1:2342931/149‑1 (MQ=255) aaTAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATACTTTCCTCGATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGaa < 2:2155219/149‑1 (MQ=255) agaGAATATTAAGCCAACAAATAAACTGAATAAGTTTGTCCACGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAAc < 1:498864/147‑1 (MQ=255) tAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACg > 1:665595/1‑149 (MQ=255) aaTATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACt > 2:431032/1‑149 (MQ=255) tatTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGc < 1:1363008/149‑1 (MQ=255) ttAAGGCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGccc < 1:1044401/149‑1 (MQ=255) aGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATg > 1:2001752/1‑149 (MQ=255) gCCAACAAATAAACTTAAAAAGTTTGTCCGCGATTCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGTGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGt < 1:871922/149‑1 (MQ=255) ccAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGACCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTAGAAAACAAATTGTACAGAACGACTGACCATGTc > 1:995718/1‑149 (MQ=255) acaaATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGAt < 1:1918394/149‑1 (MQ=255) caaCTGAAAAAGTTTGGCCGCGATGCTTTCCTAAGGCA‑GGCGCACTTGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAACCTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGaa < 1:2549987/148‑1 (MQ=255) aaCTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGaaa > 1:2610321/1‑149 (MQ=255) aaCTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGaaa > 2:101948/1‑149 (MQ=255) cTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCAGCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATa < 2:705176/149‑1 (MQ=255) aaaGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGtttt > 1:927365/1‑149 (MQ=255) aaaGTTTGTCCGCGATGCTTCCCGCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTATGGGGGAAAACTATGCAGTGTGGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGtttt < 2:2096709/149‑1 (MQ=255) tGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaa < 1:2162219/149‑1 (MQ=255) cgcgATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaaggaa > 1:1335693/1‑149 (MQ=255) cgcgATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAAGGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaaggaa < 2:1339857/149‑1 (MQ=255) gcgATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaagggaa > 1:1581786/1‑149 (MQ=255) gcgATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaaggaaa > 2:1350779/1‑149 (MQ=255) cgATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaaggaaag > 2:821463/1‑149 (MQ=255) cgATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaaggaaag > 2:2386389/1‑149 (MQ=255) gCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAACACAAAGTGTACAGAACGTCTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAagcagc < 2:1292965/149‑1 (MQ=255) gCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAagcagc < 1:655232/149‑1 (MQ=255) tctATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGaaaa > 1:534732/1‑149 (MQ=255) tATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACCGTGCAGTATTGGCAGTCAAACTCCTTTCCACAACACCGTGCACAGAGGGACTGCCTTTGTCCAGTTATGAATAGGGTGATGAAAGGAAAGCAGCATGAGAAtt > 1:234033/1‑149 (MQ=255) aTGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTa > 2:2043257/1‑149 (MQ=255) tGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCAGGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTaa > 2:2000227/1‑149 (MQ=255) tCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTGCAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGCAAATTaaaaag > 1:865897/1‑147 (MQ=255) tCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAAct > 1:1779527/1‑149 (MQ=255) tCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAAct > 2:2106869/1‑149 (MQ=255) tCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGGCGATTTAGAAATCGTTTTTTGAAAGGAAAGCAGCATGAAAATGAAACct > 2:732913/1‑149 (MQ=255) tCAAAATGGCCCCAAATGTTGCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAAct < 1:1007680/149‑1 (MQ=255) aaaaTTGCCCCAAATTTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAActct < 2:480937/149‑1 (MQ=255) aaaaTGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAActct < 1:1113195/149‑1 (MQ=255) aaaaTGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAActct < 2:869727/149‑1 (MQ=255) aaaTGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTg > 2:2237190/1‑149 (MQ=255) aaaTGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTg < 2:2230930/149‑1 (MQ=255) | TCTGTGGCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCA‑ATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGA‑GTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGG > CP009273/4532656‑4532950 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |