| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009273 | 330,734 | C→A | intergenic (‑1/‑257) | yahC ← / → yahD | putative inner membrane protein/ankyrin repeat protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 330,734 | 0 | C | A | 98.6% | 478.4 / NA | 147 | intergenic (‑1/‑257) | yahC/yahD | putative inner membrane protein/ankyrin repeat protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base A (71/74); minor base G (1/1); total (72/75) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 147 total aligned reads displayed.
CCTGCGGCATAAAAACTGCAAAAGGCGACGAAGCCAATGGTTCCTAATAATTCCCATCCTTGAGAGAGCCCGACATGTGAAGACACTAACTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATCTTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGTCAAAGAAACAAATATTGCACTACCGCACACTGCGAAAAGATTGTTGAATATTA > CP009273/330588‑330879 | cgtcATAAAAACTGCAAAAGGCGACGAAGCCAATGGTTCCTAATAATTCCCATCCTTGAGAGAGCCCGACATGTGAAGACACTAACTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTc < 1:2256379/146‑1 (MQ=255) aaaaCTGCAAAAGGCGACGAAGCCAATGGTTCCTAATAATTCCCATCCTTGAGAGAGCCCGACATGTGAAGACACTAACTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTg > 2:672017/1‑149 (MQ=255) aaaaCTGCAAAAGGCGACGAAGCCAATGGTTCCTAATAATTCCCATCCTTGAGAGAGCCCGACATGTGAAGACACTAACTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTCCCCCTCTg < 1:842410/149‑1 (MQ=255) aCTGCAAAAGGCGACGAAGCCAATGGTTCCTAATAATTCCCATCCTTGAGAGAGCCCGACATGTGAAGACACTAACTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGtt < 1:756078/149‑1 (MQ=255) tGCAAAAGGAGACGAAGCCAATGGTTCCTAATAATTCCCATCCTTGAGAGTGCTCGACATGTGAAGACACTAACTGCCAAAGCCCTGCACAAATCCCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAg < 1:137175/149‑1 (MQ=255) ggCAAAAGGCAACGAAGCCCATGGTTCCTAATAATTCCCATCCTTGAGAGAGCCCGACATGTGAAGACACTAACTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAg < 2:1117293/148‑1 (MQ=255) gCAAAGGGCGCCGAAGCCAATGGTTCCTAATAATCCCCATCCTTGAGAGAGCCCGACATGTGAAGACACTAGCTGCCAAAGCCCTGCACCAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCGGGTTGGa < 1:993249/149‑1 (MQ=255) aaaaGGCGACGAAGCCAATGGTTCCTAATAATTCCCATCCTTGAGAGAGCCCGACATGTGAAGACACTAACTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACa > 2:1759159/1‑149 (MQ=255) ggtgacgaTGCCGATGTCTCCTTATGCTTCCCATCCTTGACACCGCACGACGTGCGCAGACACTAACTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGa < 1:1043812/146‑1 (MQ=255) ggCGACGAAGCCAATGGTTCCTAATAATTCCCATCCTTGAGAGAGCCCGACATGTGAAGACACTAACTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGa < 2:966656/149‑1 (MQ=255) ggCGACGAAGCCAATGGTTCCTAATAATTCCCATCCTTGAGAGAGCCCGACATGTGAAGACACTAACTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGa < 1:1005315/149‑1 (MQ=255) cgaAGCCAAGGGTTCCTAATAATTCCCAGCCTTGAGAGAGCCCGACATGTGACGACACTAACTGCCAAAGCCCTGCACAAATACCGACGGTCACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGaaa < 1:1504466/149‑1 (MQ=255) gaAGCCAATGGTTCCTAATAATTCCCATCCTTGAGAGAGCCCGACATGTGAAGACACTAACTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTGGACATGGACGAAAg > 1:2149417/1‑149 (MQ=255) aTGGTTCCTAATAATTCCCATCCTTGAGAGAGCCCGACATGTGAAGACACTAACTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTActct > 2:1413501/1‑149 (MQ=255) ggTTCCTAATAATTCCCATCCTTGAGAGAGCCCGACATGTGAAGACACTAACTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTa < 2:2513114/149‑1 (MQ=255) gtcccTAAAAATGCCCATCCTTGGGAGAGCCCGACATGTGAAGCCACTACCTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTAc < 1:796140/146‑1 (MQ=255) gTTCCTAATAATTCCCATCCTTGAGAGAGCCCGACATGTGAAGACACTAACTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTAc < 2:1576073/149‑1 (MQ=255) taataaTTCCCATCCTTGAGAGAGCCCGACATGTGAAGACACTAACTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACAtgtg > 2:39092/1‑149 (MQ=255) taataaTTCCCATCCTTGAGAGAGCCCGACATGTGAAGACACTAACTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACAtctg > 1:2458773/1‑149 (MQ=255) aataatTCCCACCCTTGAGAGAGCCCGACATGGGAAGACACTAACTGCCAAAGCCCTGCCCAAATACCGACGGTCACACCCGTTGCCGTCAGTCCGTTCATATCGTTCCCCTCCGGCTAGACATGGACGCAAGCCACCCCTACATgcgc > 1:2374816/1‑149 (MQ=255) aataatTACCAACCTCGAGTGATCCCGACATGTGAAGACACTAACTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACGCTTACCGGTGc > 1:2306805/1‑149 (MQ=255) aatTTCCATCCTCGAGAGTGCCCGACATGTGAAGACACTAATTGCCAAAGCCCTCCACAAATTCCGACGGTTACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGCCATGGACGAAAGCTACTCTTACATGTGCAGa < 1:827675/149‑1 (MQ=255) aatTCCCATCCTTGAGAGAGCCCGACAGGTGAAGACACTAACTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGa < 2:1799441/149‑1 (MQ=255) tCCCATCCTTGAGAGAGCCCGACATGTGAAGACACTAACTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACta < 2:239906/149‑1 (MQ=255) cccATCCTTGAGAGGCCCCGACATGTGAATACACTACCTGCCAACGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACtat < 2:12017/149‑1 (MQ=255) ccATCCTTGAGAGAGCCCGACATGTGAAGACACTAACTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACtata > 2:767668/1‑149 (MQ=255) ccATCCTTGAGAGAGCCCGACATGGGAAGACACTAACTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACtata < 1:352854/149‑1 (MQ=255) cATCCGTGAGAGAGCCCGAAATGTGAAGACACTAACTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATa‑g < 1:1293347/149‑1 (MQ=255) tCCTTGAGAGAGCCCGACATGTGAAGACACTAACTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATa‑gag < 2:678382/149‑1 (MQ=255) tCCTTGAGAGAGCCCGACATGTGAAGACACTAACTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATa‑gag > 2:1293839/1‑149 (MQ=255) catGAGAGAGCCCGACATGTGAAGACACTAACTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGaa > 1:460552/3‑149 (MQ=255) cTTGAGAGAGCCCGACATGTGAAGACACTAACTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCACTCGGGTTGCACATAGACGAACGCTACTCTTACATGTGCAGACTATA‑GAGaa > 1:1321926/1‑149 (MQ=255) ttGAGAGAGCCCGACATGTGAAGACACTAACTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGACAGCTACTCTTACATGTGCAGACTATA‑GAGaaa < 1:2639067/149‑1 (MQ=255) ttGAGAGAGCCCGACATGTGAAGACACTAACTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGaaa > 1:2375778/1‑149 (MQ=255) agagCCCGACATGTGAAGACACTAACTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATaaaa > 1:1877565/1‑149 (MQ=255) cccGACATGTGAAGACACTAACTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATCAAACCTg > 2:1922655/1‑149 (MQ=255) ccGACATGTGAAGACACTAACTGCCAAAGCCCTGCACAAATACCGACGGTAACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGa > 1:1889210/1‑149 (MQ=255) gACATGTGAAGACGCTAACTGCCAACGCCCTGCTCAAATACCGGCGGTGGCCCCCCATTCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGAtt < 2:2070835/149‑1 (MQ=255) cATGTGAAGACACTAACTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGa < 1:1691786/149‑1 (MQ=255) gtgAAGACACTAACTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTg > 1:2151584/1‑149 (MQ=255) aaGACACTAACTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGGGaaa > 2:114454/1‑149 (MQ=255) aaGACACTAACTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATCGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGaaa > 1:1887878/1‑149 (MQ=255) aaGACACTAACTGCCAAAGCCCTGCACAAATACCGACGATGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTAAtaaagaaaaa > 1:575175/1‑140 (MQ=255) acacacTCACTCCCAAATGCCGCCACAAATACCGACGGGGACACCCGTTGCCGGTAGTCCGGTCATATTGTTCCCGTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAg < 2:157432/147‑1 (MQ=255) acTAACTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTa > 1:2185047/1‑149 (MQ=255) acTAACTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAAGAAAACCTGATTGAGTGAAAGGGTa > 1:197110/1‑149 (MQ=255) tAACTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATc > 1:2440345/1‑149 (MQ=255) aCTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCgg < 1:2080484/149‑1 (MQ=255) aCTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATGGTGCCACTCTGGTTAGACATGGACGCAAGCTACTCTTTGATGTGCTAATGACC‑GCGAACTCAAACCGGATTGCGTGAAAgggattcga > 1:1179418/1‑143 (MQ=255) cTGCCAAAGCCCTGCACAATTACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCggg < 2:2167537/149‑1 (MQ=255) cTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGGCCGTTCATATTGTTCCGCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAAAAAAACCTGATTGAGTGAAAGGGTATCggg > 2:1226942/1‑149 (MQ=255) tGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGt < 1:2286866/149‑1 (MQ=255) tGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCAGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGt < 1:2280019/149‑1 (MQ=255) ccAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAGGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGGGTGAAAggagagcggggcg > 1:783214/1‑138 (MQ=255) ccAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGAAGACTATA‑GAGCAATAAAACATGACTGAGTGAAAGGGTATGGAGTCa > 2:2601608/1‑149 (MQ=255) aaaGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGTCaaa > 1:397808/1‑149 (MQ=255) aaaGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGTCaaa > 2:477329/1‑149 (MQ=255) aaGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGTCAAAg < 2:864939/149‑1 (MQ=255) aaGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGTCAAAg < 2:864773/149‑1 (MQ=255) ccccGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGTCAAAGaaa < 2:2396649/149‑1 (MQ=255) cccTGCACAACTCCCGACGAAGACACACGTTGCCGAAAGTCCCTTCATAACTAACCCCACTAGTAAGACATGGACTAAAGCGACTCGTACATTTTCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGTCAAAGaaa < 1:1957009/149‑1 (MQ=255) cccTGCACAAATCCCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGTCAAAGaaa < 2:564253/149‑1 (MQ=255) cccTGCACAAATACCCACGCTCACACCCGTTGCCGTGAGCCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGTCAAAGaaa < 1:787063/149‑1 (MQ=255) ccTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGTCAAAGAAAc < 1:1413501/149‑1 (MQ=255) ccTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGTCAAAGAAAc > 2:567295/1‑149 (MQ=255) cTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTGACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGTCAAAGAAACa < 1:672017/149‑1 (MQ=255) tGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATG‑GAGAAATAGAACCTGATTGAGTGAAAGGGTATCGGGTCAAAGAAACaa > 2:360140/1‑149 (MQ=255) tGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGTCAAAGAAACaa > 2:2281093/1‑149 (MQ=255) aaaTACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGTCAAAGAAACAAATAtt > 2:963109/1‑149 (MQ=255) aaaTACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGTCAAAGAAACAAATAtt > 2:46118/1‑149 (MQ=255) aaaTACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACATGATTGAGAGAAAGGGTATCGGGGCAAAGAAACAAATAtt > 2:2483427/1‑149 (MQ=255) aaTACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGTCAAAGAAACAAATATTg < 1:2120117/149‑1 (MQ=255) tACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGTCAAAGAAACAAATATTGCa < 1:1155018/149‑1 (MQ=255) aCGGTGAGACCCGTTGCCGTGAGACCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGTCAAAGAAACAAATATTGCACTAcc > 1:1819613/1‑149 (MQ=255) aCGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGTCAAAGAAACAAATATTGCACTAcc > 2:1368224/1‑149 (MQ=255) cGGTGACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGGCATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGTCAAAGAAACAAATATTGCACTACCg < 2:2440818/149‑1 (MQ=255) gggACACTCGTTGCCGTTAGTCCGTGCCTATTGTTCCCCGCTGGTTAGACACGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGTCAAAGAAACAAATATTGCACTACCGca < 1:2312410/147‑1 (MQ=255) gcaaccctgtGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAACGGGTATCGGGTCAAAGAAACAAATATTGCACTACCGcaca < 1:166960/140‑1 (MQ=255) gACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGACAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGTCAAAGAAACAAATATTACACTACCGccca > 1:249673/1‑149 (MQ=255) gACACCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAgg > 1:356278/1‑111 (MQ=255) acacCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGGAGGGGTATCGGGTCAAAGAAACAAATATGGCGCTGCCGcgcat > 1:872795/1‑148 (MQ=255) ccccGTTCCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGTCAAAGAAACAAATATTGCACTACCGCACACTg < 2:1796559/148‑1 (MQ=255) acCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATACAACCTGATTGAGTGAAAGGGTATCGGGTCAAAGAAACAAATATTGCACTACCGCACACTg < 2:1833663/149‑1 (MQ=255) acCCGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGTCAAAGAAACAAATATTGCACTACCGCACACTg > 2:145203/1‑149 (MQ=255) cccGTGGCCGGGAGTCCGTTCATATTGTTCCCCTCGGGTTAGACATGGACGAAAGCTACGCTTACATGTGCAGACTATA‑GCGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGTCAAAGAAACAAATATTGCACTACCGCACACTGc < 1:151417/149‑1 (MQ=255) ccGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATC‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGTCAAAGAAACAAATATTGCACTACGGCCCACTGCg > 2:2138574/1‑149 (MQ=255) ccGTTGCCGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGTCAAAGAAACAAATATTGCACTACCGCACACTGCg > 2:283234/1‑149 (MQ=255) tggCCGTGAGTCCGTTCAGATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGTCAAAGAAACAAATATTGCACTACCGCACACTGCGaaa < 2:1306120/147‑1 (MQ=255) ccGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGCTATCGGGTCAAAGAAACAAATATTGCACTACCGCACACTGCGAAAAGa < 2:79190/149‑1 (MQ=255) cGTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGTCAAAGAAACAAATATTGCACTACCGCACACTGCGAAAACAt > 1:2012022/1‑149 (MQ=255) cGTGAGTCCGTTCATATTGTTCCACTCAGGTTAGACATGGACGAAGGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGATGTCGGGTCAAAGAAACAAATATTGCACTACCGCACACTGCGAAAAGAt > 1:2011885/1‑149 (MQ=255) gTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGTCAAAGAAACAAATATTGCACTACCGCACACTGCGAAAAGAtt > 2:2439040/1‑149 (MQ=255) gTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGTCAAAGAAACAAATATTGCACTACCGCACACTGCGAAAAGAtt > 2:2212663/1‑149 (MQ=255) gTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGTCAAAGAAACAAATATTGCACTACCGCACACTGCGAAAAGAtt > 2:1883388/1‑149 (MQ=255) gTGAGTCCGTTCATATTGTTCCCCTCTGGTTAGACATGAACGAAAGCTACTCTTACATGTGCAGA‑TACATGAGTAATAACACCTGATTGAGTGAAAGGGTATCGGGTCAAAGAAACAAATATTGCACTACGGCACACTGCGAAAAGAtt > 2:1169470/1‑149 (MQ=255) tCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGTCAAAGAAACAAATATTGCACTACCGCACACTGCGAAAAGATTGTTGa > 1:169701/1‑149 (MQ=255) tCCGTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGTCAAAGAAACAAATATTGCACTACCGCACACTGCGAAAAGATTGTTGa > 2:1449977/1‑149 (MQ=255) gTTCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGTCAAAGAAACAAATATTGCACTACCGCACACTGCGAAAAGATTGTTGAata > 2:2666845/1‑149 (MQ=255) gTTCATATTGTTCCCATCGGGTCAGACAGGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGTCAAAGAAACAAATATTGCACTACCGCACACTGCGAAAAGATTGTTGAata < 1:1434699/149‑1 (MQ=255) ttCATATTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAAGAAAACCTGATTGAGTGAAAGGGTATCGGGGCAAAGAAACAAATATTGCACTACCGCACACTGCGAAAAGATTGTTGAatat > 1:2614026/1‑149 (MQ=255) | CCTGCGGCATAAAAACTGCAAAAGGCGACGAAGCCAATGGTTCCTAATAATTCCCATCCTTGAGAGAGCCCGACATGTGAAGACACTAACTGCCAAAGCCCTGCACAAATACCGACGGTGACACCCGTTGCCGTGAGTCCGTTCATCTTGTTCCCCTCTGGTTAGACATGGACGAAAGCTACTCTTACATGTGCAGACTATA‑GAGAAATAAAACCTGATTGAGTGAAAGGGTATCGGGTCAAAGAAACAAATATTGCACTACCGCACACTGCGAAAAGATTGTTGAATATTA > CP009273/330588‑330879 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |