| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009273 | 3,370,460 | (T)5→6 | coding (320/639 nt) | sspA ← | stringent starvation protein A, phage P1 late gene activator, RNAP‑associated acid‑resistance protein, inactive glutathione S‑transferase homolog |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,370,455 | 1 | . | T | 96.3% | 167.6 / NA | 55 | D109N (GAC→AAC) | sspA | stringent starvation protein A, phage P1 late gene activator, RNAP‑associated acid‑resistance protein, inactive glutathione S‑transferase homolog |
| Reads supporting (aligned to +/- strand): ref base . (1/0); major base T (22/30); minor base G (1/1); total (24/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CAGGCTGAACTCATCGCTCAGGAAGTACGGCTTCTGACCGAAGACCGGCGCAATCGCCAGCAGTTCTTCGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTC‑TT‑TTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGG > CP009273/3370312‑3370597 | cAGGCTGAACTCATCGCCCAGGAAGTACGGCTTCTGACCGAAGACCGGCGCAATCGCCAGCAGTTCTTCGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTTAAGAGTTTGTTCATCAGCGTGTACCAGTC‑tt‑ttt < 1:332694/149‑1 (MQ=255) ggCTGAACTCCTCGCTCAGGAAGTACGGCTTCTGACCGAAGACCGGCGCAATCGCCAGCAGTTCTTCGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTC‑tt‑tttt < 2:945567/148‑2 (MQ=255) ggCTGAACTCATCGCTCAGGAAGTACGGCTTCTGACCGAAGACCGGCGCAATCGCCAGCAGTTCTTCGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTC‑tt‑tttt < 2:872176/148‑2 (MQ=255) ggCTGAACTCATCGCTCAGGAAGTACGGCTTCTGACCGAAGACCGGCGCAATCGCCAGCAGTTCTTCGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTC‑tt‑tttt < 2:111584/148‑2 (MQ=255) gCTGAACTCATCGCTCAGGAAGTACGGCTTCTGACCGAAGACCGGCGCAATCGCCAGCAGTTCTTCGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTC‑tt‑ttttcg < 1:186631/149‑4 (MQ=255) cTGAACTCATCGCTCAGGAAGTACGGCTTCTGACCGAAGACCGGCGCAATCGCCAGCAGTTCTTCGCGCAGTTGCTTACGTGCGGCATATGCTTCAGAAGCTGCACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTC‑tt‑ttttcg < 2:919464/148‑4 (MQ=255) tGAACTCATCGCTCAGGAAGTACGGCTTCTGACCGAAGACCGGCGCAATCGCCAGCAGTTCTTCGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTC‑tt‑ttttcgat > 1:1087866/1‑144 (MQ=255) tGAACTCATCGCTCAGGAAGTACGGCTTCTGACCGAAGACCGGCGCAATCGCCAGCAGTTCTTCGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTC‑tt‑ttttcgag > 1:49021/1‑144 (MQ=255) aaCTCATCGCTCAGGAAGTACGGCTTCTGACCGAAGACCGGCGCAATCGCCAGCAGTTCTTCGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTT‑TTTcgatgc < 1:804673/149‑1 (MQ=255) cTCATCGCTCAGGAAGTACGGCTTCTGACCGAAGACCGGCGCAATCGCCAGCAGTTCTTCGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTT‑TTTcgatgcga < 1:459675/149‑1 (MQ=255) aTCGCTCAGGAAGTACGGCTTCTGACCGAAGACCGGCGCAATCGCCAGCAGTTCTTCGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTT‑TTTcgatgcgatg > 2:1222782/1‑148 (MQ=255) gcccggagaaaGTCCGGCTTCGGATCGAAGACCGGCGCAATCGCCAGCAGTTCTTCGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTT‑TTTCgatgggatgc < 2:580721/139‑1 (MQ=255) cGCTCAGGAAGTACGGCTTCTGACGGAAGACCGGCGCAATCGCCAGCAGTTCTTCGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTT‑TTTCGATGCGATGCAt < 1:1226761/149‑1 (MQ=255) cGCTCAGGAAGTACGGCTTCTGACCGAAGACCGGCGCAATCGCCAGCAGTTCTTCGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTT‑TTTCGATGCGATGCAt < 1:41939/149‑1 (MQ=255) gCTCAGGAAGTACGGCTTCTGACCGAAGACCGGCGCAATCGCCAGCAGTTCTTCGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTT‑TTTCGATGCGATGCATg > 1:1274222/1‑149 (MQ=255) tCAGGAAGTACGGCTTCTGACCGAAGACCGGCGCAATCGCCAGCAGTTCTTCGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTT‑TTTCGATGCGATGCATGt > 2:169050/1‑148 (MQ=255) gAAGTACGGCTTCTGACCGAAGACCGGCGCAATCGCCAGCAGTTCTTCGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTT‑TTTCGATGCGATGCATGTACAGa > 1:1176366/1‑149 (MQ=255) gAAGTACGGCTTCTGACCGAAGACCGGCGCAATCGCCAGCAGTTCTTCGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTT‑TTTCGATGCGATGCATGTACAGa < 1:553267/149‑1 (MQ=255) tACGGCTTCTGACCGAAGACCGGCGCAATCTCCAGCAGTTCTTCGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTT‑TTTCGATGCGATGCATGTACAGACGGc > 1:711440/1‑149 (MQ=255) cTTCTGACCGAAGACCGGCGCAATCGCCAGCAGTTCTTCGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTT‑TTTCGATGCGATGCATGTACAGACGGCTTTc < 2:1038071/148‑1 (MQ=255) ttCTGACCGAAGACCGGCGCAATCGCCAGCAGTTCTTCGCGCAGTTGCTTACGGGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTT‑TTTCGATGCGATGCATGTACAGACGGCTTTCa < 2:644393/148‑1 (MQ=255) gACCGAAGACCGGCGCAATCGCCAGCCGTTCTTCGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTGATCAGCTTGTACCAGTCTTT‑TTTCGATGCGATGCATGTACAGACGGCTTTCACcgc < 2:808792/148‑1 (MQ=255) aCCGAAGACCGGCGCAATCGCCAGCAGTTCTTCGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTT‑TTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGa < 1:676303/149‑1 (MQ=255) aCCGAAGACCGGCGCAATCGCCAGCAGTTCTTCGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTT‑TTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGa < 1:744485/149‑1 (MQ=255) cGAAGACCGGCGCAATCGCCAGCAGTTCTTCGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTCCCAGTC‑TTGTTTCGATGCGATGCCTGTACAGCCGGCTTTCACCGCGAGc > 1:523000/1‑149 (MQ=255) cGAAGACCGGCGCAATCGCCAGCAGTTCTTCGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTT‑TTTCGATGCGGTGCATGTACAGACGGCTTTCACCGCGAg > 2:821242/1‑148 (MQ=255) cGAAGACCGGCGCAATCGCCAGCAGTTCTTCGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTT‑TTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGc > 1:898162/1‑149 (MQ=255) cGAAGACCGGCGCAATCGCCAGCAGTTCTTCGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGCTCCTCCGCGTGTACCCGTCTTT‑TTTCGGTGCGAGGCATGTACAGACGGCTTGCAGcggcgg > 2:615308/1‑144 (MQ=255) gAAGACCGGCGCAATCGCCAGCAGTTCTTCGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTT‑TTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCt > 1:272901/1‑149 (MQ=255) cgcccGGCGCGATCGCCAGCAGGTGTTCGCGGAGTTGCTTGCGTGCGGCATCTGCTTCCGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTT‑TTTCGCTGCGATGCATGTACAGACGGCTTTCACCGCGAGCTa < 2:1064033/145‑1 (MQ=255) aCCGGCGCAATCGCCAGCAGTTCTTCGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTT‑TTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCg < 1:556428/149‑1 (MQ=255) ccGGCGCAATCGCCAGCAGTTTTTCGCGCAGTTGCTTACGTGCGGCATCGGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTT‑TTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCgg < 1:626639/149‑1 (MQ=255) gcgcAATCGCCAGCAGTTCTTCGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGCGTACCAGTCTTT‑TTTCGATGCGATGCCTGTACAGACAGCTTTCACCGCGAGcaccagggg > 2:1226481/1‑140 (MQ=255) aTCGCCAGCAGTTCTTCGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTT‑TTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAg < 1:945005/149‑1 (MQ=255) tCGCCAGCAGTTCTTCGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTT‑TTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGGGCTACCGGGTAAACAgg > 1:311943/1‑149 (MQ=255) tCGCCAGCAGTTCTTCGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTT‑TTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAgg > 1:311903/1‑149 (MQ=255) tCGCCAGCAGTTCTTCGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTT‑TTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGGAAACAgg > 1:558819/1‑149 (MQ=255) gTTCTTCGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTT‑TTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTgg < 1:1326648/149‑1 (MQ=255) ttcttcGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTT‑TTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTgg < 2:1035769/148‑1 (MQ=255) cttcGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTT‑TTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGACATCAGTGGCgg > 1:159417/1‑149 (MQ=255) cgcAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTT‑TTTCGATGCGATGCATGTACAGACGGCTTTTACCGCGTGCTACCGGGTAAACAGGCATCAGTGGCGGATGCg < 1:1212868/149‑1 (MQ=255) aGTTGCTTACGTGCGGGATCTGCTTCAGAAGCTGAACCGTTGATGGTGGTGTTCATCAGCGTGTACCAGACGTT‑TTTCGATGCGATGCATGTACAAACGGCTTTCACCGCGGGCTACGCGGGAAAGAGGCCTCGATGGCgggtctggg > 2:520838/1‑141 (MQ=255) ttACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTT‑TTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCAACAGTGGCGGAGGCGGGAAACga > 2:206391/1‑147 (MQ=255) aCGTTCGGCATCTGCTTCGGAAGCGGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTT‑TTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTc < 2:446433/148‑1 (MQ=255) aCGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTT‑TTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCa > 1:746338/1‑149 (MQ=255) cGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTT‑TTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCAGGAGTGGCGGATGCGGGGAACGCACATCCa > 2:437726/1‑148 (MQ=255) ggCATCTGCGTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTT‑TTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAg < 2:868655/148‑1 (MQ=255) cTGCGTCAGAAGCTGAACCGTTGATGATGGTGTTCAGCAGCGTGTACCAGTCTTT‑TTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATAtt < 2:644778/148‑1 (MQ=255) tGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTT‑TTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAACCGCTCATCCAGATATTcc > 1:682168/1‑149 (MQ=255) gCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTT‑TTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCa > 1:1345847/1‑149 (MQ=255) cTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTT‑TTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCg > 1:1254642/1‑149 (MQ=255) tGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTT‑TTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCg < 2:759374/148‑1 (MQ=255) gTTGAGGATGGTGTGCATCGGCGTGTACCAGTCTTT‑TTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTc < 2:697896/148‑1 (MQ=255) tgatgGTGTTCATCAGCGTGTACCAGTCTTT‑TTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCcaca < 2:179427/148‑1 (MQ=255) tgatgGTGTTCATCAGCGTGTACCAGGCTTT‑TTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCcaca < 2:565564/148‑1 (MQ=255) ggTGTTCCTCGGTGTGTACCAGTCGTT‑TTTCGATGCGATGCATGTACAGCCGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGt < 2:71927/148‑1 (MQ=255) gtgtTCATCAGCGTGTACCGGTCTTT‑TTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTc < 2:803168/148‑1 (MQ=255) catcaGCGTGTACCAGTCTTT‑TTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCa < 1:394072/149‑1 (MQ=255) atcaGCGTGTACCAGTCTTT‑TTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCAc > 1:172571/1‑149 (MQ=255) tcaGCGTGTACCAGTCTTT‑TTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGGAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACg > 1:169342/1‑149 (MQ=255) aCCAGTCTTT‑TTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATccacca < 2:1014695/148‑1 (MQ=255) ccAGTCTTT‑TTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCAACGGGGGCAGCTCACGTTCCACCAg < 2:277142/148‑1 (MQ=255) cAGTCTTT‑TTTCGATGCGAGGCATGTACAGACGGCTTTCACCGCGAGCGACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAgg < 2:814348/148‑1 (MQ=255) | CAGGCTGAACTCATCGCTCAGGAAGTACGGCTTCTGACCGAAGACCGGCGCAATCGCCAGCAGTTCTTCGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTC‑TT‑TTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGG > CP009273/3370312‑3370597 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |