| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009273 | 2,420,353 | A→G | intergenic (‑86/+135) | hisJ ← / ← argT | histidine/lysine/arginine/ornithine transporter subunit/lysine/arginine/ornithine transporter subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,420,353 | 0 | A | G | 98.7% | 249.2 / NA | 76 | intergenic (‑86/+135) | hisJ/argT | histidine/lysine/arginine/ornithine transporter subunit/lysine/arginine/ornithine transporter subunit |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (37/38); minor base T (0/1); total (37/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACC > CP009273/2420212‑2420496 | gcAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATccc > 1:387399/1‑149 (MQ=255)gcAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATcc < 2:144239/148‑1 (MQ=255)gcAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTGTATAGGGAATATTTACAGGTTTGTTCCACTTANCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATcc > 2:1223037/1‑148 (MQ=255) aGTTGCGCTGGAGAAGGTCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGc < 1:527138/149‑1 (MQ=255) gcgcTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTAAAGGTTTGTTACACTTATCGT‑GCCATAAAATTGTCCATCA‑AGGCAAGATATCCCGcccc < 2:1243320/148‑1 (MQ=255) gcTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGtt > 1:805718/1‑149 (MQ=255) tGGAGAAGGCCAGAACCAGACAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCATCTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACTCTTTTCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTa < 2:439258/148‑1 (MQ=255) aGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGta < 2:641955/148‑1 (MQ=255) ggCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGtatt > 1:1314902/1‑149 (MQ=255) ggCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCGTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGtat > 2:919793/1‑148 (MQ=255) ccAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGtattat > 1:483234/1‑149 (MQ=255) ccAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGtatta > 2:225235/1‑148 (MQ=255) acAGAACCAGAGAGTGCGATAGCACCAGTTTTTTCATAATTTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGA‑ATTCACAACCAAGATATCCCGCCCCGTTAGACGtattat < 1:331971/148‑1 (MQ=255) aGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTAttt < 1:908534/149‑1 (MQ=255) gAACCAGAGATAGCGTTAGCACCATTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTAtttt < 1:624146/149‑1 (MQ=255) cAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCAt > 1:367742/1‑149 (MQ=255) agagagCGATAGCACCAGCATTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGATGCCGAACGGGCCTGCT‑CCGTGATTTTGGCCATAGAATTGGCCATCA‑TGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTaa > 1:1002590/1‑149 (MQ=255) cGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGc < 1:87816/149‑1 (MQ=255) cGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATGGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCCTTCAAAATg > 2:16707/1‑148 (MQ=255) aCCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTCAACATCA‑CGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTCAGTa > 1:1334695/1‑149 (MQ=255) aCCAGGTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGACTATTTACAGGTTTGCTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGt < 2:441434/148‑1 (MQ=255) aGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGc < 1:1216303/149‑1 (MQ=255) ctgttttCATAATTTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGc < 2:866434/145‑1 (MQ=255) ttttCTTAATGTCCTCAACAGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCAttt < 1:697294/149‑1 (MQ=255) ttttCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGTATTATTATTTTTCATTAAACATGCTTAAGTATGCAttt < 1:1007213/149‑1 (MQ=255) tttCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCAttt < 2:1021813/148‑1 (MQ=255) cATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATGTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAACATGCTTAAGTATGCATTTCAAt > 1:504271/1‑149 (MQ=255) cATAATGTCCTCAACTGACAGTCATTTTATAGGGAATATTTACAGGTTTGTTAGACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAAt > 1:753921/1‑149 (MQ=255) aTAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAAt > 2:38855/1‑148 (MQ=255) tAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCTT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATg > 2:301889/1‑148 (MQ=255) tAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGc > 1:542856/1‑149 (MQ=255) aaTGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCCTTGAAAATGCTTAAGTATGCATTTCAATGc > 2:42326/1‑148 (MQ=255) aaTGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGc < 2:489384/148‑1 (MQ=255) aTGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑TCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGcac > 1:1066229/1‑149 (MQ=255) tCCTCACTTGACAGTCTTTTTATAGGAAATACTTACAGGTTTGTTACACCTATCGT‑GCCATAAAAGTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGcacca < 2:1044148/148‑1 (MQ=255) tCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTGTCTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCACGATATCCCGCTCCGTTAGACGTATTCTTTTTCATTCAAAATGCTTAAGTATGCATTTCAATGcacca > 2:823949/1‑148 (MQ=255) ccTCCACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAATATATCCCGCCCCGTTAGACGTATTATGTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACg < 1:1207266/149‑1 (MQ=255) cTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACg > 2:128859/1‑148 (MQ=255) cTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTCCAATGCACCACg > 2:471956/1‑148 (MQ=255) aaCTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGCTa > 2:738195/1‑148 (MQ=255) cTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTg > 1:554206/1‑149 (MQ=255) tGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTg < 2:342341/148‑1 (MQ=255) gACAGTCTTTTTATAGGGAATATTTACAGTTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGca < 1:813478/149‑1 (MQ=255) aCAGTTTTTTTATAGGGAATATTTACAGGTTTGTTTCACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGcaa < 1:854601/149‑1 (MQ=255) aCAGTTTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGca < 2:367900/148‑1 (MQ=255) aCAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGcaa > 1:1287690/1‑149 (MQ=255) aGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGcaac > 2:214305/1‑148 (MQ=255) ttttttATAGGGAATTTTTACAGGTTTTTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCGCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAAc < 1:1188792/148‑1 (MQ=255) cTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATGTCAATACACTACGATAGTGcaacaact > 1:784767/1‑147 (MQ=255) tttttATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAAcc > 1:144625/1‑149 (MQ=255) tttATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTg < 1:1168380/149‑1 (MQ=255) ttATAGGGAATTTTTACAGGTTTGTAACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTgg < 1:669079/149‑1 (MQ=255) ataGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCATGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATCCACCACGATAGTGCAACAAAcccaga > 2:611053/1‑144 (MQ=255) ggggAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGt < 2:1037366/147‑1 (MQ=255) gggAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGc < 1:505475/149‑1 (MQ=255) ggAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCa > 1:298577/1‑149 (MQ=255) gAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCa < 2:478804/148‑1 (MQ=255) gAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCAc > 1:412182/1‑149 (MQ=255) tttACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCatga < 1:1103455/149‑1 (MQ=255) aCAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCAtgatga < 1:99618/149‑1 (MQ=255) aCAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCAtgatga < 1:99317/149‑1 (MQ=255) tACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCAt < 2:727535/148‑1 (MQ=255) acacTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCa < 1:234385/149‑1 (MQ=255) acacTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCa > 1:1248917/1‑149 (MQ=255) cTTATCGT‑GCCATAAAATTGACCATCA‑AGACAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATTATCATTCCATCAGGt > 1:3396/1‑149 (MQ=255) ttATCGT‑GCCATAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGGACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCTTCTGGt > 2:34205/1‑148 (MQ=255) gT‑GCCACAAGCTCGACCATCA‑AGGCAAGATATCCCGCCCCGTTATACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGc < 2:606445/148‑1 (MQ=255) aTAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCCTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCCACATGATGATCATTCCATCAGATACAGCTTcca > 2:1235054/1‑147 (MQ=255) tAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCa < 2:535605/148‑1 (MQ=255) tAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACAACGAGTATCATTCCATCAGGTACAGCTTCCCa < 2:1211415/148‑1 (MQ=255) tAAAATTGACCATCA‑AGGCAAGATATCCCGCCCCGTTAGACGCCTTATTTTTCATTAAAAATGCTCAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCAATCCGGTACAGCTTCCCAg > 1:276300/1‑149 (MQ=255) gttGACCAACA‑AGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAACAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGAc < 1:1182552/148‑1 (MQ=255) aTTGACCATCA‑AGGCGAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTGTGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGTTCATTCCATCAGATACTGGTCCCCGGCGAc > 1:45337/1‑149 (MQ=255) ccgtCA‑AGACAAGATATCCCGCCCCGTTAGACTTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTAAATGCACCACGATAGTTCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTAt < 2:532635/145‑1 (MQ=255) ggCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCAcc > 1:214239/1‑149 (MQ=255) ggCAAGACATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTCCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCAc < 2:1060812/148‑1 (MQ=255) | GCAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGT‑GCCATAAAATTGACCATCA‑AGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACC > CP009273/2420212‑2420496 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |