New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	360104 =	NA (NA)	100 (1.600)	76/292	0.0	NA	intergenic (‑38/+557)	lacZ/lacI	pseudogene, truncated/DNA‑binding transcriptional repressor
	?	CP009273	= 360286	NA (NA)					intergenic (‑220/+375)	lacZ/lacI	pseudogene, truncated/DNA‑binding transcriptional repressor

CCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAC‑CAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCCGCGTTT  >  CP009273/360138‑360434                                                                                                                                                     |                                                                                                                                                      ccACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCCCCGACAAACAACAGATAAAACGAAAGTCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaatt                                                                                                                                                       >  2:560004/1‑149 (MQ=21)   aCCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGAAGAGCGATCACCAACAAACAACAGATAAAACAAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaattgg                                                                                                                                                     >  2:271059/1‑149 (MQ=255)     ccTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCACGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCCGTCTTTCGACTGAGCCTTTCGTTTTATTTTATGCCTGgggaattggta                                                                                                                                                   >  1:685181/1‑147 (MQ=255)      cTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGCCTTTCGACTGAGCCTTTCGTTTTATTTAATGCCTGgggagttgggaa                                                                                                                                                  >  1:622643/1‑149 (MQ=255)       tCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaattgggaat                                                                                                                                                 >  2:973500/1‑149 (MQ=39)       tCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaattgggaat                                                                                                                                                 >  2:567354/1‑149 (MQ=39)       tCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaattgggaat                                                                                                                                                 >  1:421184/1‑149 (MQ=39)        ccGGGACGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaattgggaatt                                                                                                                                                <  2:776195/149‑1 (MQ=255)             ccGTTGCTGCGCAACGTTTAAATCCGCCCCCGGCGGATTTGTCCTACTCAGGGGCGCTCGCACCGACAAACAACCGATAAAACGAAAGGGCCAGTCTGTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTTGGaaataatac                                                                                                                                           <  1:270182/149‑3 (MQ=11)              cGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGGTTTGTCCTACTCGGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCt                                                                                                                                          >  2:802338/1‑149 (MQ=255)                ttGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTg                                                                                                                                        >  2:545450/1‑149 (MQ=255)                  gCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTATATTTGATGCCTGGGAACTTGGGAATTAATTCTTGaa                                                                                                                                      >  2:215302/1‑149 (MQ=255)                    ttCGCAACGTTCTAATCCGCTCCCGGCGGATTTGTCCTACTCAGGATAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGa                                                                                                                                    <  2:923606/149‑1 (MQ=255)                        cAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGaa                                                                                                                                >  2:599970/1‑149 (MQ=255)                             ttCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGc                                                                                                                           <  1:85701/149‑1 (MQ=255)                              tCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGcc                                                                                                                          >  2:877580/1‑149 (MQ=255)                               cAAATCCGCTCCCGGCGGATTTGTCCTACACAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGCCTTTCGACTGAGCCCTGCGTTTTATTTGCGGCCTGGGGAATTGGGAACTAATTCTTGAAGACGAAAGGGCCt                                                                                                                         >  2:1028611/1‑149 (MQ=17)                                 aacccGCCCCCGGCGGATTTGTCCTACTCAGGAGAGCGTGCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTCCGACTGAGCCTTTCGTCTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCg                                                                                                                       <  1:863757/146‑1 (MQ=18)                                  ctCCGCTCCCGGCGGATTTGTCCTACTCAGGGCAGAGTCCACCGACAAACAACAGATAAAACGAACGGCCCAGTCTTTTGACTCAGTCAACAGTTTTATTTGACGCCTCGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCACGt                                                                                                                      <  1:371653/148‑1 (MQ=18)                                         cccGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGc                                                                                                               <  2:982696/149‑1 (MQ=255)                                          ccGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGACCCAGTCTTTCGACTGAGCCTTTCACTTTATTTGATGCCAGGGGAATTGGGAATTAATTCTTGAAGCCGAAATGCCCTCGTGATCCGcc                                                                                                              >  2:101083/1‑149 (MQ=18)                                                    tgcccTACTCAGGAGTGCGTTCACCGATAAACAACTGATAAAACGAAAGGCCCAGTCTTTCGACTTAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTtata                                                                                                    <  2:129606/146‑1 (MQ=25)                                                    tGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTtata                                                                                                    <  1:731674/149‑1 (MQ=255)                                                        cTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGtt                                                                                                <  1:545450/149‑1 (MQ=255)                                                         tACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTa                                                                                               >  2:774387/1‑149 (MQ=255)                                                            tCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATg                                                                                            >  2:668504/1‑149 (MQ=255)                                                            tCAGGAGAGCGTTCACCGACAAACAACAGAAAAAACGAAAGGCCCAGTCTCACGACTGAGCCGTTCGTATTATTTGATGCCTGGGGGCTTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGGTACGCCTATTTTTATAGGTGaaag                                                                                            >  1:1012136/1‑147 (MQ=21)                                                                gagcgcctgcACCGTGAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCAt                                                                                        <  1:973500/140‑1 (MQ=37)                                                                gagaGCGTTCACCGACAAACAACAGATAAAACGAAAGGCTCAGTCTTTCGACTGAGCCTTTCATTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTGTAGGGTAATGTctt                                                                                        >  1:631532/1‑147 (MQ=255)                                                                     cGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGaa                                                                                   <  2:421184/149‑1 (MQ=255)                                                                      gTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAg                                                                                  >  1:68430/1‑149 (MQ=255)                                                                        tCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCGTGGGaatta                                                                                >  1:1035768/1‑146 (MQ=255)                                                                            cGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGGAGATCCAg                                                                            >  1:554537/1‑149 (MQ=255)                                                                            cGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAg                                                                            >  2:960327/1‑149 (MQ=255)                                                                            cGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAg                                                                            <  1:567354/149‑1 (MQ=255)                                                                            cGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAg                                                                            >  2:960296/1‑149 (MQ=255)                                                                              acaaacaaCAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGcc                                                                          <  2:979940/149‑1 (MQ=255)                                                                                aaacaaCAGATAAAACGAAAGGCCCAGTCTTGCGACTGAGCCTTTCGTTTTATTTGATGCATGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGAGACAGACGa                                                                        >  2:978524/1‑149 (MQ=37)                                                                                    aacaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGAACCAGCCGAC‑CAg                                                                   >  2:328800/1‑149 (MQ=255)                                                                                     acaGCTAAAACGAAAGGTCCAGTCTTTCGACTGAGCCGTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATGCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAC‑CAgg                                                                  <  2:431419/149‑1 (MQ=255)                                                                                     acaGATAATACGAAAGGCCTAGTCTTTTGATTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAC‑CAgg                                                                  <  2:310112/149‑1 (MQ=255)                                                                                     acaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAC‑CAgg                                                                  <  1:565292/149‑1 (MQ=255)                                                                                       aGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTGAATGTCATGGGAAGAACCAGCCGAC‑CAGGCt                                                                >  2:612648/1‑149 (MQ=255)                                                                                       aGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGGTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAC‑CAGGCt                                                                >  2:853966/1‑149 (MQ=255)                                                                                          tAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTACTGTCATGGGAAGCTCCAGCCGAC‑CAGGCTTTc                                                             >  1:314528/1‑149 (MQ=255)                                                                                          tAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAC‑CAGGCTTTc                                                             <  2:945389/149‑1 (MQ=255)                                                                                          cacaacagatggCCCAGTCTTTCGCCTGAGCCTTTCGTTTTATTTGATGCCCGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAC‑CAGGCTTTc                                                             <  1:560004/139‑1 (MQ=39)                                                                                             aaCGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAC‑CAGGCTTTCCAc                                                          >  2:895969/1‑149 (MQ=255)                                                                                                    ggctccgtcgaaagACTGGGCCATACGTTTTAGTTGATGCCTGGGGAATTGGGGATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAA‑CAGGCTTTCCACGCCcgcg                                                   >  1:94087/14‑149 (MQ=255)                                                                                                       ccAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAC‑CAGGCTTTCCACGCCCGCGTGc                                                >  2:434474/1‑149 (MQ=255)                                                                                                         aGTCTTTCGACTGAGCCTTTCGTTTTATTTGGTGCCTGGGGGATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGGCAATGTCATGGGACGAGCCAGCCGAC‑GAGGCTTTCCACGCGCGCGTGCCg                                              >  1:880382/1‑149 (MQ=38)                                                                                                             tttGGACTGAGCCTCTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTTAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAC‑CAGGCCTTCCACGCCCGCGTGCCGCTcc                                          <  1:338955/149‑1 (MQ=255)                                                                                                             tttCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAC‑CAGGCTTTCCACGCCCGCGTGCCGCTcc                                          <  1:774387/149‑1 (MQ=255)                                                                                                             tttCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAC‑CAGGCTTTCCACGCCCGCGTGCCGCTcc                                          >  2:59874/1‑149 (MQ=255)                                                                                                                    tGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAC‑CAGGCTTTCCACGCCCGCGTTCCGCTCCATGTCGt                                   >  1:406370/1‑149 (MQ=255)                                                                                                                          tttCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAC‑CAGGCTTTCCACGCCCGCGTGCAGCTCCATGTCGTTcgcgc                             >  2:907765/1‑149 (MQ=255)                                                                                                                           ttCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAC‑CAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTcgcgcg                            >  1:501183/1‑149 (MQ=255)                                                                                                                           ttCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAC‑CAGGCTTTCCACGCCCGCGTGCCGCTCCAGGTCGTTcgcgcg                            >  1:951451/1‑149 (MQ=255)                                                                                                                            tCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAC‑CAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCgg                           <  2:685181/149‑1 (MQ=255)                                                                                                                              gTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATATGTTAATGTCATGGGAAGATCCAGCCGAC‑CAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGtt                         <  2:141750/149‑1 (MQ=255)                                                                                                                              gTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAC‑CAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGtt                         <  2:132080/149‑1 (MQ=255)                                                                                                                                 ttATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAC‑CAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTtctc                      <  1:941310/149‑1 (MQ=255)                                                                                                                                  tattgtttGCCTGGGGAATTGGGAATTAATTATTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAATATCCAGCCGAC‑CAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCTTTCGCGCGGTTCTCg                     <  1:445899/142‑1 (MQ=255)                                                                                                                                   aTTTGCTGCCTGGGGAATGGGGAATTAATTCTTGAAGACGAAATGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAC‑CAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCgg                    <  1:845113/149‑1 (MQ=255)                                                                                                                                   aTTTGATGCCTGGGGAATTGGGAGTTAATTCTTGAAGACGAAAGGGCCTCGTGATACGACTGTTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAC‑CAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCgg                    >  1:571336/1‑149 (MQ=255)                                                                                                                                   aTTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTCTTTTTATAGGTTAATGTCATGGGAAGAT‑AACCCTCCTCATCCATTCCACGCCCGCGAGCCGCTCCATGTCGTTCGCGCGGTtctcag                    >  2:29078/1‑147 (MQ=255)                                                                                                                                         tGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAC‑CAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAAcgc              <  2:992907/149‑1 (MQ=255)                                                                                                                                          gCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCCCGTGGTACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAC‑CAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAAcgcg             >  2:297881/1‑149 (MQ=255)                                                                                                                                           ccTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAC‑CAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACgcgc            >  1:91693/1‑149 (MQ=255)                                                                                                                                           ccTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAAGGTCATGGGAAGATCCAGCCGAC‑CAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGTTtccgagaaccgcgc            <  1:110180/149‑13 (MQ=255)                                                                                                                                             tGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAC‑CAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTg          >  1:954474/1‑149 (MQ=255)                                                                                                                                               gggaattgggaattAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAC‑CAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGcc        <  2:501183/149‑1 (MQ=255)                                                                                                                                               gggaattgggaattAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTGTGATAGGTTAATAGCATGGGAAGATGCAGCCGAC‑CAGGCTTTCCGCGCCCACGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGcc        >  1:260328/1‑149 (MQ=255)                                                                                                                                                ggaattgggaattAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAC‑CAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCcg       <  1:599970/149‑1 (MQ=255)                                                                                                                                                 gaattgggaattAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAC‑CAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCcgc      <  2:436709/149‑1 (MQ=255)                                                                                                                                                  aattgggaattAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAC‑CAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAAcgcggcagcgcg     >  1:816863/1‑141 (MQ=255)                                                                                                                                                     tgggaattAATTCTTGAAGACGAAAGGGCCTCGTGATCCGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAC‑CAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCCGCGttt  <  1:90894/149‑1 (MQ=255)                                                                                                                                                     tgggaattAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAC‑CAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCCGCGttt  <  2:425656/149‑1 (MQ=255)                                                                                                                                                     tgggaattAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAC‑CAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCCGCGttt  >  2:171069/1‑149 (MQ=255)                                                                                                                                                     tgggaagtAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCGTGGGAAGATCCAGCCGAC‑CAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGAAAACGCGCTGCCGCGgtt  >  2:111295/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                      CCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAC‑CAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCCGCGTTT  >  CP009273/360138‑360434

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.