| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,774,512 | 0 | A | G | 27.1% | 90.0 / 13.6 | 59 | intergenic (+135/‑63) | lldD/trmL | L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent |
| Reads supporting (aligned to +/- strand): ref base A (34/9); new base G (2/14); total (36/23) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.86e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCC‑GGGGA‑GAGGG‑CC‑GGGGTGA‑GGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCG > CP009273/3774365‑3774657 | gAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCC‑GGGGA‑GAGGG‑CC‑GGGGTGA‑g < 2:962516/149‑1 (MQ=255) aaTGCGGCATAGTCGTTTGCGCCCCCTCCCCCTAACCCTGTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTGCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCC‑GGGGA‑GAGGG‑CC‑GGGGTGA‑gg < 2:978275/149‑1 (MQ=255) aTGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCC‑GGGGA‑GAGGG‑CC‑GGGGTGa < 1:581913/146‑1 (MQ=255) ggCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCC‑GGGGC‑GCGGG‑CC‑GGGGTGA‑GGGGa‑aa > 2:672104/1‑149 (MQ=255) gCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCCCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCCCTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCC‑GGGGA‑GAGGG‑CC‑GGGGTGA‑GGGGa‑aaa < 2:292068/149‑1 (MQ=255) cATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCC‑GGGGA‑GCGGG‑CC‑GGGGTGA‑GGGGa‑a > 1:156640/1‑146 (MQ=255) tagtgcgttGCGCCCCCCCCCCCTAACCCGCTCCCCCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCCCGCCCCTCC‑GGGGA‑GAGGG‑CC‑GGGGTGA‑GGGGa‑atg < 1:482522/139‑3 (MQ=255) tAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCC‑GGGGA‑GAGGG‑CC‑GGGGTGA‑GGGGa‑aaa < 1:210605/146‑1 (MQ=255) gTCGCTTGCTCCCCCTCCCCCTAACCCTCTCCCTCAGGGAGGGGGGACCGTTCGGCGCTGTATGTACTCCCTCCCCCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCC‑GGGGA‑GAGGG‑CC‑GGGGTGA‑GGGGA‑AAAgg < 1:444207/146‑1 (MQ=255) cGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCC‑GGGGA‑GAGGG‑CC‑GGGGTGG‑GGGGA‑AAAGGCCGCa > 2:402596/1‑149 (MQ=255) gTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCC‑GGGGA‑GAGGG‑CC‑GGGGTGG‑GGGGA‑AAAGGCCg > 1:751076/1‑146 (MQ=255) gTTTGCGCCCCCTCACCCTAACCCGCTCCCTCAGGGAGCGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCC‑GGTGA‑GCGGG‑AC‑GGGGTTA‑GGGGA‑AAAAGCCGCaa > 2:16556/1‑148 (MQ=255) tttGCGCCCCCTCACCCTAACCCACTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGTACTCTTTTTTTCACCCTCGCCCCTCC‑GGGGA‑GAGGG‑CC‑GGGGTGA‑GGGGA‑AAAGGcccc > 1:716337/1‑144 (MQ=255) gcgcCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCCCC‑GGGGA‑GAGGG‑CC‑GGGGTGA‑GGGGA‑AAAGGCCGCACt > 1:321821/1‑146 (MQ=255) gcCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCGCTCTTTTTTTCTCCCTCGCCCCTCC‑GGGGA‑GAGGG‑CC‑GGGGTGA‑GGGGA‑AAAGGCGGCCCTGc > 1:519183/1‑146 (MQ=255) cccccTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCC‑GGGGA‑GAGGG‑CC‑GGGGTGA‑GGGGA‑AAAGGCCGCACTGCTCAc > 2:1139590/1‑149 (MQ=255) ccTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCC‑GGGGA‑GAGGG‑CC‑GGGGTGA‑GGGGA‑AAAGGCCGCCCTGCTCACCAAttt > 1:778382/1‑146 (MQ=255) ccTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCC‑GGGGA‑GAGGG‑CC‑GGGGTGA‑GGGGA‑AAAGGCCGCACTGCTCACCAATTTTCt > 2:443253/1‑149 (MQ=255) tCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCC‑GGGGA‑GAGGG‑CC‑GGGGTGA‑GGGGA‑AAAGGCCGCACTGCTCCCCAATTTTCTGCTATCCTGccccc > 2:363474/1‑149 (MQ=255) tCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCC‑GGGGA‑GAGGG‑CC‑GGGGTGA‑GGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGcc > 1:962237/1‑146 (MQ=255) agagGGGACCATTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCC‑GGGGA‑GAGGG‑CC‑GGGGTGA‑GGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTa > 2:566391/1‑149 (MQ=255) gggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCC‑GGGGA‑GAGGG‑CC‑GGGGTGA‑GGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTaa > 1:89732/1‑146 (MQ=255) gggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCC‑GGGGA‑GAGGG‑CC‑GGGGTGA‑GGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggg > 2:899445/1‑149 (MQ=255) tggtCGGCGCTGTCTGCTCCCCCCCCCTCTGAAGCGGCCCCGCTCTTTTTTTTCCCCCCCCCCCCCCCG‑GGGGA‑GGGGG‑CC‑GGGGTGG‑GGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggggg < 1:489748/143‑1 (MQ=255) ttCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCC‑GGGGA‑GAGGG‑CC‑GGGGTGA‑GGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCCCTAGGGGGGCAGtc > 2:523390/1‑148 (MQ=255) ttCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCC‑GGGGA‑GAGGG‑CC‑GGGGTGA‑GGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTa > 2:772499/1‑149 (MQ=255) gcgcTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCC‑GGGGA‑GAGGG‑CC‑GGGGTGA‑GGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCCCTAAGGGGGCAGTATGCt > 2:206914/1‑149 (MQ=255) tatgtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCC‑GGGGA‑GAGGG‑CC‑GGGGTGA‑GGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTaaa > 1:960666/1‑146 (MQ=255) ccTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCC‑GGGGA‑GAGGG‑CC‑GGGGTGA‑GGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACt > 1:463085/1‑146 (MQ=255) ccTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCC‑GGGGA‑GAGGG‑CC‑GGGGTGA‑GGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGGACt > 1:708095/1‑146 (MQ=255) ccTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCATCC‑GGGGA‑GAGGG‑CC‑GGGGGGA‑GGGGA‑ACAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACaccagcct > 1:846561/1‑139 (MQ=255) tCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCC‑GGGGA‑GAGGG‑CC‑GGGGTGA‑GGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACg > 2:651854/1‑149 (MQ=255) tctGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCC‑GGGGA‑GAGGG‑CC‑GGGGTGA‑GGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAAcc > 2:37777/1‑149 (MQ=255) tGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCC‑GGGGA‑GAGGG‑CC‑GGGGTGA‑GGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAg > 2:1095968/1‑149 (MQ=255) acaccccctccctttttttttCTCCCCGCCCCCGTC‑GGGGAGGGGGG‑CG‑GGGGTGG‑GGGAA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGaaa < 2:651783/135‑1 (MQ=255) gcctcggtctgttgtttcCTCCCGCGGCCCGCCGGGGGC‑GGGGG‑GT‑GGGGGGG‑GGGAA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGaaa < 1:560168/132‑1 (MQ=255) cccccccctctTTTTCCCCCCCGCCCCCCGCC‑GGGGA‑GAGGG‑CG‑GGGGTGA‑GGGAA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCg < 2:792097/142‑1 (MQ=255) cGCACTCTTTTTTTCTCCCTCGCCCCTCC‑GGGGA‑GAGGG‑CC‑GGGGTGA‑GGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGACCCAGAAATTCCGCCa > 2:15950/1‑149 (MQ=255) ccctcttttttttCCCCCCCCCCCCCGG‑GGGGG‑GGGGG‑CG‑GGGGTGG‑GGGAA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCaa < 2:788340/143‑1 (MQ=255) ctTTTTTTCTCCCTCGCCCCTCC‑GGGGA‑GAGGG‑CC‑GGGGTGA‑GGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACt > 2:480254/1‑149 (MQ=255) tttttttCTCCCTCGCCCCTCC‑GGGGA‑GAGGG‑CC‑GGGGTGA‑GGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTg > 2:976815/1‑149 (MQ=255) ttttCTCCCTCGCCCCTCC‑GGGGA‑GAGGG‑CC‑GGGGTGA‑GGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCa > 2:820847/1‑149 (MQ=255) ttCCCCCGCGCCCTCCG‑GGGGC‑GGGGG‑CG‑GGGGTGG‑GGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGc < 1:102836/146‑1 (MQ=255) tcCCTCGCCCCTCC‑GGGGA‑GAGGG‑CC‑GGGGTGA‑GGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAAc > 1:405294/1‑146 (MQ=255) cccccccccccGCC‑GGGGG‑GGGGG‑CC‑GGGTTGG‑GGGAA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAAc < 1:1050967/139‑1 (MQ=255) gccccggccttCC‑GGGGC‑GGCGG‑CC‑GGGGGGATGGGGA‑AACGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGTGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAAc < 1:327429/136‑1 (MQ=255) ccgcggcccggcgggggA‑GGGGG‑CG‑GGGGTGG‑GGGGA‑AGGGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAAca < 1:581876/133‑1 (MQ=255) tCGCCCCTCC‑GGGGA‑GAGGG‑CC‑GGGGTGA‑GGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAAcatca > 1:364294/1‑146 (MQ=255) cGCCCCTCC‑GGGGA‑GAGGG‑CC‑GGGGTGA‑GGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAAcatcat > 1:326189/1‑146 (MQ=255) cGCCCCCAC‑GGGGG‑GGGGG‑CG‑GGGGGGG‑GGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAAcatcat < 1:387445/146‑1 (MQ=255) ccgggaggggT‑GGGGG‑CCGGGGGAGG‑GGGAA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTc < 2:1045167/143‑1 (MQ=255) tggggggA‑GGGGC‑CG‑GGGGGGG‑GGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCt < 1:289511/143‑1 (MQ=255) ggggA‑GAGGG‑CC‑GGGGTGA‑GGGGA‑AAAGGCCGCACTGCTCACCAATGTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTg > 1:687246/1‑146 (MQ=255) gggagGG‑CG‑GGGGGGG‑GGGAA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTgcgc < 1:701116/144‑1 (MQ=255) a‑gagGG‑CC‑GGGGTGA‑GGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCt > 1:989618/1‑146 (MQ=255) ggagGGCCC‑GGGGTGG‑GGGGC‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTgcgc < 1:514980/145‑1 (MQ=255) ggg‑CC‑GGGGTGA‑GGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATAcc > 2:992017/1‑149 (MQ=255) ggcggggggggg‑gggGA‑AAGGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAAt < 1:130987/141‑1 (MQ=255) g‑CC‑GGGGTAG‑GGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATAc < 1:866789/146‑1 (MQ=255) ggTGA‑GGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCATCTTTGCGCTAATACCGGCTTTc < 2:636835/149‑1 (MQ=255) gTGG‑GGGGATAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTc < 2:592287/149‑1 (MQ=255) a‑GGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATGCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCGACATCATCCGTCTGTGCGGTAATACCCGCTTTCg > 1:197504/1‑146 (MQ=255) | GAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCC‑GGGGA‑GAGGG‑CC‑GGGGTGA‑GGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCG > CP009273/3774365‑3774657 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |