| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,621,613 | A→T | 4.5% | L429* (TTA→TAA) | rbbA ← | ribosome‑associated ATPase: ATP‑binding protein/ATP‑binding membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,621,613 | 0 | A | T | 4.5% | 277.9 / 2.6 | 90 | L429* (TTA→TAA) | rbbA | ribosome‑associated ATPase: ATP‑binding protein/ATP‑binding membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (41/43); new base T (2/2); total (45/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.28e-01 | |||||||||||
GCGGTCGCAACGTTCCGCTTCGTTCATAAAGTGGGTGGAGATGAAGATAGTCACTTTGTCCTGGCGCGAGAGATCGACCATCAACTGCCAGAACATATCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCGGCAGAATATCTTCAACGTCGTTGAGCTTAAAACGCTCGCTCATTTCAGCCACTCTTGCGGGAATTTCCGCTTCCG > CP009273/3621471‑3621760 | gCGGTCGCAACGTTCCGCTTCGTTCATAAAGTGGGTGGAGATGAAGATAGTCACTTTGTCCTGGCGCGAGAGATCGACCATCAACTGCCAGAACATATCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCCCATCGAGGATTa > 2:294824/1‑143 (MQ=255) cGGTCGCAACGTTCCGCTTCGTTCATAAAGTGGGTGGAGATGAAGATAGTCACTTTGTCCTGGCGCGAGAGATCGACCATCAACTGCCAGAACATCTCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACCtctc > 1:176332/1‑149 (MQ=255) ggTCGCAACGTTCCGCTTTGTTCATAAAGTGGGTGGAGATGAGGTTAGTCACTTTGTCCTGGCCCGAGAGCTCGACCATTTTTTTTTTAATGATA‑CGGCGACCACCGAGATCTACACCAGAAGTAGGCTCATCGAGGATTAAc < 2:130599/143‑1 (MQ=255) ggTCGCAACGTTCCGCTTCGTTCATAAAGTGGGTGGAGATGAAGATAGTCACTTTGTCCTGGCGCGAGAGATCGACCATCAACTGCCAGAACATATCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAAc < 2:91489/143‑1 (MQ=255) tCGCAACGTTCCGCTTCGTTCATAAAGTGGGTGGAGATGAAGATAGTCACTTTGTCCTGGCGCGAGAGATCGACCATCAACTGCCAGAACATATCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGAGTAGCGTCTCCgg > 1:139469/1‑149 (MQ=255) tCGCAACGTTCCGCTTCGTTCACAAAGTGGGTGGAGATGAAGATAGTCACTTTGTCCTGGCGCGAGGGATCGACCATCAACTGCCAGAACATATCCCCCGCCACCG‑GATCGACACCAGAAGTAGGCTCAACGAGGATTATCATATCCgg > 1:367170/1‑149 (MQ=255) cGCAACTTTCCGCTTCGTTCATAAAGTGGGTGTAGATGAAGATAGTCACTTTGTCCTGGCGCGAGAGATCGACCATCAACTGCCAGAACATATCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCggg < 1:191482/149‑1 (MQ=255) aaCGTTCCGCTTCGTTCATAAAGTGGGTGGAGATGAAGATAGTCACTTTGTCCTGGCGCGAGAGATCGACCATCAACTGCCAGAACATATCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGa < 1:180930/149‑1 (MQ=255) cGCTTCGTTCATAAAGTGGGTGGAGAGGAAGATAGTCACTTTGTCCTGGCGCGAGCGATCGACCATCATTTGCCAGATCATACCGCGCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGAt < 2:106284/143‑1 (MQ=255) gCTTCGTTCATAAAGTGGGTGGAGATGAAGATAGTCACTTTGTCCTGGCGCGAGAGATCGACCATCAACTGCCAGAACATATCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTGACATCTCCGGGCGagg > 2:76195/1‑141 (MQ=255) gCTTCGTTCATAAAGTGGGTGGAGATGAAGATAGTCACTTTGTCCTGGCGCGAGAGATCGACCATCAACTGCCAGAACATATCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATcac < 1:325021/149‑1 (MQ=255) cTTCGTTCATAAAGTGGGTGGAGATGAAGATAGTCACTTTGTCCTGGCGCGAGAGATCGACCATCAACTGCCAGAACATATCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATcacc < 1:134831/149‑1 (MQ=255) tCGTTCATAAAGTGGGTGGAGATGAAGATAGTCACTTTGTCCTGGCGCGAGAGATCGACCATCAACTGCCAGAACATATCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAAt < 2:2283/143‑1 (MQ=255) tCGTTCATAAAGTGGGTGGAGATGAAGATAGTCACTTTGTCCTGGCGCGAGAGATCGACCATCAACTGCCAGAACATATCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATcaccgc < 1:93680/149‑1 (MQ=255) gttgaaaaaGTGGGTGGAGATGAAGGCAGTCCCTTTGTCCGGGCGCGCGCGATCGACCATCAACTGCCAGAACATATCCCTCGCCCCCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATca < 2:182794/137‑1 (MQ=255) ttCATAAAGTGGGTGGAGATGAAGATTTTCACTTTGTCCTGGCGCGAGAGATCGACCATCAACTGCCAGAACATATCCCTCGCCACCG‑GATCGACACCAGAAGTCGGCTCATCGAGGATTAACATCTCCGGCCGATGAATcac > 2:250280/1‑143 (MQ=255) ttCATAAAGTGGGTGGAGATGAAGATAGTCGCTTTGTCCTGGCGCGAGAGATCGACCATCAACTGCCAGCACATCTCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTCACATCTCCGGGCGCTGAATgacggccgc > 1:35613/1‑147 (MQ=255) tCATAAAGTGGGTGGAGATGAAGATAGTCACTTTGTCCTGGCGCGAGAGATCGACCATCAACTGCCAGAACATATCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATcaccgccacc < 1:123442/149‑1 (MQ=255) tCATAAAGTGGGTGGAGATGAAGATAGTCACTTTGTCCTGGCGCGAGAGATCGACCATCAACTGCCAGAACATATCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATcaccgccacc < 1:366263/149‑1 (MQ=255) cATAAAGTGGGTGGAGATGAAGATAGTCACTTTGTCCTGGCGCGAGAGATCGACCATCAACTGCCAGAACATATCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGGGATGAATaaccggcaccg > 1:118467/1‑149 (MQ=255) aaGGGGGTGGAGATGAAGATAGTCACTTTGTCCTGGCGCGAGAGATCGACCATCAATTGCCAGAACATACCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATcaccgccac < 2:270919/143‑1 (MQ=255) gtgggtggAGATGAAGATAGTCACTTTGTCCTGGCGCGAGAGATCGACCATCACCTGCCAGAACATATCCCTCGCCACCG‑GATCGACACCAGAAGTGCGCTCATCGAGGAGTAACAACCCCCGGCGATGAATcaccaccaccg > 2:180394/1‑143 (MQ=255) gtgggtggAGATGAAGATAGTCACTTTGTCCTGGCGCGAGAGATCGACCATCAACTGCCAGAACATATCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTTACATCTCCGGGCGATGAATcaccgccaccg > 2:330185/1‑143 (MQ=255) gtgggtggAGATGAAGATAGTCACTTTGTCCTGGCGCGAGAGATCGACCATCAACTGCCAGAACATATCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTTACATCTCCGGGCGATGAATcaccgccaccg > 2:261509/1‑143 (MQ=255) ggtggAGATGAAGATAGTCACCTTGTCCTGGCGCGAGAGATCGACCATCAACTGCCAGAACATATCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGaaa < 1:5831/149‑1 (MQ=255) gagaTGAAGATAGTCACTTTGTCCTGGCGCGAGAGATCGACCATCAACTGCCAGAACATATCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGCAAGCCg > 1:171324/1‑149 (MQ=255) gagaTGAAGATAGTCACTTTGTCCTGGCGCGAGAGATCGACCATCAACTGCCAGAACATATCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCg > 1:323390/1‑149 (MQ=255) tGAAGATAGGCACTTTGTCCTGGCGCGAGAGATCGACCATCAACTGCCAGCACATATCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTgg < 1:169388/149‑1 (MQ=255) aGTCACTTTGTCCTGGCGCGAGAGATCGACCATCAACTGCCAGAACATATCCCTCGCCACCG‑GATCGCCACCAGAAGAAGGCTCATCGAGGATTAACACCTCCGGGCGATGAATCACCACCCCCGCCCGCCGACGCCGCGTGCGAAGGc > 1:148232/1‑149 (MQ=255) gTCACTTTGTCCCGGCGCGAGAGATCGACCATCAACTGCCAGAACATATCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGcc < 1:229664/149‑1 (MQ=255) cattaaacTGGCGCGAGAGATCGACCATCAACTGCCAGAACATATCCCTCGCCACCG‑GATCGACACCCGAAGTAGGCTCATCGAGGAGTAACATCTCCGGGCGATGAATCACCGCCACCCCCCGCGAAAACCGCTGGCGAATg > 2:86846/8‑143 (MQ=255) cTTTGGCCGGCCGCGAGCCATCGACCAGCAACTGCCAGAACATATCCCTCGCCCCCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATg < 2:25177/143‑1 (MQ=255) tttGTCCTGGCGCGAGAGATCGACCATCAACTGCCAGAACATATCCCTCGCCACCG‑GATCGACGCCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGTAACCCGCTGGCGAATGCCggggg > 1:188916/1‑145 (MQ=255) tttGACCTGGCGCGAGAGATCGACCATCAACTTCCACAACATCTCCCGCCCCCCCG‑GACCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGc < 2:127678/143‑1 (MQ=255) tggccTGGCGCGAGAGATCGACCATCAACTGCCAGAAAATATCCCTCGCCACCG‑GATCGACACCAGAAGTAAGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGCCGCATGCCg > 2:314015/4‑143 (MQ=255) tGTCCTGGCGCGAGAGATCGACCATCAACTGCCAGAACATATCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGc > 1:234842/1‑149 (MQ=255) tGTCCCGGCGCGAGAGATCGACCATCAACTGCCAGAACATATCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGc < 1:63855/149‑1 (MQ=255) gTCCTGGCGCGAGAGATCGACCATCAACTGCCAGAACAGAGCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCa < 1:159589/149‑1 (MQ=255) cTGGCGCGAGAGATCGACCATGAACTGCCAGAACATATCCCTCGCCACCG‑GATCGAGACCAGGAGTGGGCTCATCGAGGATTAACATCTCCGGGCGATGAGTCACCGCCCCCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCg > 2:106807/1‑143 (MQ=255) tGGCGCGAGTGATCGACCATCAACTGCCAGAACATAGCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGa < 1:242008/149‑1 (MQ=255) tGGCGCGAGAGATCGACCATCAACTGCCAGAACATATCCCTCGCCAGCG‑GATCGGCACCAGAAGTAGGCGCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACGGCCAGCGAAAGCCGCTGGCGAATGCCGAGCgg > 2:103494/1‑143 (MQ=255) tGGCGCGAGAGATCGACCATCAACTGCCAGAACATATCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCGGGCGAATGCCGAGCGGCAATGa > 1:151318/1‑149 (MQ=255) tGGCGCGAGAGATCGACCATCAACTGCCAGAACATATCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATAGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGa > 1:325299/1‑149 (MQ=255) gcgcGAGAGATCGACCATCAACTGCCAGAACATATCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCCCATCGAGGATTAACATCTCCGGGCGATGAATCCCCGCCACCGCCCGCGAAAGCCGCTGGCGACTGGCGAGCGGcc > 2:87147/1‑142 (MQ=255) gcgAGAGATCGACCATCAACTGCCAGAACATATCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCGGCGAAAGCCGCTGCCGAATGCCGCGCGGCAAt > 2:109786/1‑143 (MQ=255) gagagaTCGACCATTCACGTCCAGAACATATCCCTCGCCACCG‑GATCGACCCCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAAGCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGa < 2:14442/143‑1 (MQ=255) agagaTCGACCATCAACTGCCAGAACATATCCCTCGCTACCG‑GATCGATACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTCGCGAATGCCGAGCGGCAATGACTCCGGc < 1:240611/149‑1 (MQ=255) agagaTCGACCATCAACTGCAAGAACATATCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCgga > 1:357806/1‑148 (MQ=255) aTCGACCATCAACTGCCAGAACATATCCCTCGCCCCCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCg < 2:186603/143‑1 (MQ=255) gACCATCAACTGCCACAACATATCCCCCCCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCGGCa < 2:25253/143‑1 (MQ=255) aCCATCAACTGCCAGAACATATCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCGGCAGAATATc > 1:148916/1‑149 (MQ=255) cATCAACTGCCAGAACATATCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCGGCAGaa < 2:209534/143‑1 (MQ=255) cATCAACTGCCAGAACATATCCCTCGCCACCG‑GATCGACACCAGAAGTAGGATCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCGGCAGAATATCtt > 1:346533/1‑149 (MQ=255) aTCAACTGCCAGAACATATCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACCCCGCCAGAat > 2:260455/1‑143 (MQ=255) aTCAACTGCCAGAACATATCCCCCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACACCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCGGCAGAATATCTTc < 1:356285/149‑1 (MQ=255) ttGCCAGAACATATCCCGCGCCGCCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCGGCAGAATATCtt < 2:155488/142‑1 (MQ=255) tGCCAGAACATATCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCGGCAGAATATCTTCAAcgtc > 1:262866/1‑149 (MQ=255) gCCAGAACATATCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCGGCAGAATATCTTCa < 2:317831/143‑1 (MQ=255) ccAGAACATATCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCGGCAGAATATCTTCAAcgtcgt > 1:201299/1‑149 (MQ=255) aaGACCACATCCCTCCCCACCG‑GACCGACACCAGAAGTAGGCTCACCGAGGATTACCATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCGGCAGAATATTTTCAACGTCGtt < 1:61128/148‑1 (MQ=255) aaCATATCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCGGCAGAATATCTTCAACGTCGTTGAg > 1:36638/1‑149 (MQ=255) cATATCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCGGCAGAATATCTTCAACGTCGTTGAGCt > 1:100673/1‑149 (MQ=255) cccTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTTACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCGGCAGAATATCTTCAACGTCGTTGAGCTTaaaa < 1:291363/149‑1 (MQ=255) cccTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTTACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCGGCAGAATATCTTCAACGTCGTTGAGCTTaaaa < 1:365167/149‑1 (MQ=255) cccTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCGGCAGAATATCTTCAACGTCGTTTAGCTTcaaa > 1:139518/1‑149 (MQ=255) ccTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCGGCAGAATATCTTCAACGTCGTTGAGCTTAAAAc < 1:35825/149‑1 (MQ=255) ccACCG‑GATCGACACCAGAAGTAGGATCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCGGCAGAATATCTTCAACGTCGTTGAGCTTAAAAcgctcg < 1:226236/149‑1 (MQ=255) cG‑GATCGACACCGGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGCCTCCGTTAGAATATCTTCAACGTCGTTGAGCTTAAAAcgct < 2:233839/143‑1 (MQ=255) cG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCGGCAGAATATCTTCAACGTCGTTGAGCTTAAAAcgct < 2:290496/143‑1 (MQ=255) gaccGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGCGCGGCAATGACTCCGGCAGAATATCTTCAACGTCGTTGAGCTTAAAAcgctcg < 2:174415/140‑1 (MQ=255) gATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCGGCAGAATATCTTCAACGTCGTTGAGCTTAAAACGCTCGCTCAtt > 1:243455/1‑149 (MQ=255) gaaacCAGAAGTAGGCTGATGGAGGTTTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCAAATGCCGAGCGGCAATGACTCCGGCAGAATATCTTCAACGTCGTTGAGCTTAAAACGCTCGCTCATTTCAg < 1:216814/146‑1 (MQ=255) acacCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCGGCAGAATATCTTCAACGTCGTTGAGCTTAAAACGCTCGCTCAt > 2:199173/1‑143 (MQ=255) acacCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAAGCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCGGCAGAATATCTTCAACGTCGTTGAGCTTAAAACGCTCGCTCATTTCAGc < 1:171068/149‑1 (MQ=255) cAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCGGCAGAATATCTTCGACGTCGTTGCGCTTAAAACGCTCGCTCATTTCAGCCAct > 1:43842/1‑149 (MQ=255) cAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCGGCAGAATATCTTCGACGTCGTTGAGCTTAAAACGCTCGCTCATTTCa > 2:228224/1‑143 (MQ=255) gTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCGGCAGAATATCTTCAACGTCGTTGAGCTTAAAACGCTCGCTCATTTCAGCCACTCTTGc > 1:50344/1‑149 (MQ=255) tAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCGGCAGAATAACTTAAACGTCGTTGAGCTTAAAACGCTCGCTCATTTCAGCCACTCTTGCg > 1:69152/1‑149 (MQ=255) ggCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCGGCAGCATATCTTCAACGTCGTTGAGCTTAAAACGCTCGCTCATTTCAGCCAccct > 2:35912/1‑143 (MQ=255) ggCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCGGCAGAATATCTTCAACGTCGTTGAGCTTAAAACGCTCGCTCATTTCACCCAcact > 2:144256/1‑143 (MQ=255) ggCTCACCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCGGCAGAATATCTTCAACGTCGTTGAGCTTAAAACGCTCGCTCATTTCAGCCACTCTTGCggg < 1:164916/149‑1 (MQ=255) gCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGACACAGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACACCGGCAGCATATCTTCAACATCGTGGAGGTCAAAACGCTCACTCATTTCAGCCAATCtt > 2:191116/1‑143 (MQ=255) cTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCGGCAGAATATCTTCAACGTCGTTGAGCTTAAAACGCTCGCTCATTTCAGCCACTCTTGCGGGaa > 1:299440/1‑149 (MQ=255) tgaTCGAGGATGATCATCCCCGGGCGAGCCATCACCGCCAGCGCCAGCGAAAGGCGCTGGCGAATGCCGAGCGGCAATGACTCCGGCAGAATATCTTCAACGTCGTTGAGCTTAAAACGCTCGCTCATTTCAGCCACTCTTGCGGGAAt < 1:5101/147‑1 (MQ=255) cATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCGGCAGAATATCTTCAACGTCGTTGAGCTTAAAACGCTCGCTCATTTCAGCCACTCTTGCg < 2:18867/143‑1 (MQ=255) gAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCGGCAGAATATCTTCAACGTCGTTGAGCTTAAAACGCTCGCTCATTTCAGCCACTCTTGCGGGaa < 2:241476/143‑1 (MQ=255) aGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCGGCAGAATATCTTCAACGTCGTTGAGCTTAAAACGCTCGCTCATTTCAGCCACTCTTGCGGGAATTTCCGc > 1:129274/1‑149 (MQ=255) gATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCGGCAGAATATCTTCAACGACGTTTAGGTTAAAACGCTCGCGCATTTCAGCCACTCTTGCGGGAAttt > 2:242076/1‑143 (MQ=255) ttAACATCTCCGGGCGATGGATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCCATGACTCCGGCAGAATATCTTCAACGTCGTTGAGCTTCAAACGCTCGCTCATTTCAGCCACTCTTGCGGGAATTTcc < 2:292053/143‑1 (MQ=255) tAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCGGCAGAATATCTTCAACGTCGTTGAGCTTAAAACGCTCGCTCATTTCAGCCACTCTTGCGGGAATTTCCg > 2:179204/1‑143 (MQ=255) tAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCGGCAGAATATCTTCAACGTCGTTGAGCTTAAAACGCTCGCTCATTTCAGCCACTCTTGCGGGAATTTCCGCTTCCg < 1:220988/149‑1 (MQ=255) | GCGGTCGCAACGTTCCGCTTCGTTCATAAAGTGGGTGGAGATGAAGATAGTCACTTTGTCCTGGCGCGAGAGATCGACCATCAACTGCCAGAACATATCCCTCGCCACCG‑GATCGACACCAGAAGTAGGCTCATCGAGGATTAACATCTCCGGGCGATGAATCACCGCCACCGCCAGCGAAAGCCGCTGGCGAATGCCGAGCGGCAATGACTCCGGCAGAATATCTTCAACGTCGTTGAGCTTAAAACGCTCGCTCATTTCAGCCACTCTTGCGGGAATTTCCGCTTCCG > CP009273/3621471‑3621760 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |