| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4285799 = | 74 (1.340) | 4 (0.070) | 4/218 | 9.1 | 5.1% | noncoding (77/530 nt) | RIP321 (repetitive extragenic palindromic) element; contains 9 REP sequences | RIP321 (repetitive extragenic palindromic) element; contains 9 REP sequences |
| ? | CP009273 | = 4286250 | NA (NA) | noncoding (528/530 nt) | RIP321 (repetitive extragenic palindromic) element; contains 9 REP sequences | RIP321 (repetitive extragenic palindromic) element; contains 9 REP sequences | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCT > CP009273/4285652‑4285910 | ttGACCGTAAGAAAGCGCTGTCTTATCAGTGTGAAGTGCTGGGCAAATTTAATAAAACTGCGGATCAATAATTTAATATTTCCTGTTATATCCACCCTGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACg < 1:357737/149‑1 (MQ=37) tGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTTGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGc < 1:173527/149‑1 (MQ=255) cGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGa > 1:618085/1‑149 (MQ=255) gTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCCAACTCGACACCACTGCCGATCAATCCTAGCACATCGCCGGGCTTATCCAGCTGGTAAGGGG‑GGGCTGCGGGGTGCGACGCGTGCCGGGTCTTATCAGGCCTACGccgggc > 2:1211971/1‑145 (MQ=255) gTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGAc > 2:532435/1‑149 (MQ=255) tAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGCTAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACa > 1:993700/1‑149 (MQ=255) gAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAgcg > 1:217727/1‑149 (MQ=255) aaaGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAgcgc > 2:775588/1‑149 (MQ=255) gcgcTGGCGTTGGAGGGTGAAGGGCTGGGAAAATTTGGTAACACGTGGGATCAATAATTGAAGATTGCCAGGGATTTCCATCCGGCAACGTG‑TGAATGCCTGATGCCACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACATCGCAAt < 2:535620/149‑1 (MQ=21) cgcgtgCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCGTATCAGGCCTACGCCAGACAGCGCAATa < 2:993700/144‑1 (MQ=255) cgcTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATa > 1:1089902/1‑149 (MQ=255) cgcTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGGCTTATCAGGCCTACGCCAGACAGCGCAATa < 1:852989/149‑1 (MQ=255) tGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGcc > 1:213733/1‑149 (MQ=255) atcGTTAAGTGCTGCGCAAATTTGATAATACTGCGGATCAATAATTCACGTTTGCCGGGGATATCCGCCCTGAAACTTG‑TGTGTGCCTGATGTGACGCTTGGTTCATCTTATCTGGCTTCTGCCAAACAGCGCAATAGCCTGATTTatc < 2:610312/147‑3 (MQ=255) aGCGTGCAGTGCTGGGCAAATTTGATAAAACTGCTGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGc < 2:981350/149‑1 (MQ=255) aGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGc < 1:958263/149‑1 (MQ=255) aGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGc > 1:360317/1‑149 (MQ=255) gCGTGAAGTACTGCGCAAATTTGCTAAAACTGCGGATCAATATTTGAAGATTGCCGGGGATATCCACCCGGCAATGGC‑TGAATGCCGGATGCGGCGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCg < 2:115495/149‑1 (MQ=25) gAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGAAAGCGCAATAGCCTGATTTAGCGTGAt > 1:1073262/1‑149 (MQ=255) gAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACCCCAAACAGCCCCATAGCCCGATTTAGCgggta > 2:623742/1‑145 (MQ=37) gAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAAAGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAt > 1:716454/1‑149 (MQ=255) gAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGAGTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCAGCTTATCGGGGCTACGCCCGACAGCGCACTCGCCGGATTTAGCGTGAt > 2:983256/1‑149 (MQ=37) aaGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAtt > 1:1115468/1‑149 (MQ=255) aGTGCTGGGCAAATTTGATAAAACTTCGGATCAATAATTTAAGATTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAttt < 1:1057495/149‑1 (MQ=255) gCTGGGCAAATTTGATAAACCTGCGGATCTATAATTGAAGATTGCCGGGGATATCCTCCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGt < 1:987341/149‑1 (MQ=255) gCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCAAGACAGCGCAATAGGCTGCTTTAGCGTGGTTTTGt > 2:144872/1‑149 (MQ=255) gtGGGCAAATTTGATAAAACTGCGGACCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGTCTGATTTAGCGTGATTTTGTa < 2:674739/148‑1 (MQ=255) cTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCCGACAGCGCAATACCCTAGTTTAGCGTGTTTTTTTa > 1:518231/1‑149 (MQ=37) tGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAg > 1:1221380/1‑149 (MQ=255) ggCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGt < 1:1189071/149‑1 (MQ=255) ggCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGt > 2:1211375/1‑149 (MQ=255) gCAAATTGTAGAAAGCTGCGGATCAATAATGGAACATTGCCGGGGATATCCACTCGTGAATGGG‑TGAATGCCTGATGCGCCCCTTGCTGCGTCGTATCAGGCCTACGCCAGACAGCGCAATATCCTTATTTAGCGTGATTTTGTAgggc < 2:1500/149‑3 (MQ=18) cAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCTGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCg > 1:887941/1‑149 (MQ=255) cAAATTTGATAAAACCGCGGATCAATAAGTGAAGATTGCCGGGGTTCTGACGTCGGCAATGTT‑TGAATGCCTTATGCGACGCTTCGCGCCTCTTATCAGGCCTACGCCAGACCGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCg < 2:4345/149‑1 (MQ=18) tttGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATa > 1:1060814/1‑149 (MQ=255) ttGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATaa < 2:108970/149‑1 (MQ=255) tGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCCTATCAGGCCTACGCCAGACAGCGCAATAGCCTGACTAAGCATGAGTTTGTAGGACGGATAAg > 1:224152/1‑149 (MQ=25) tGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGACATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAg < 1:874501/149‑1 (MQ=255) ataaactcgCGGATCCATAGTTGTAGATTCCCGGGGTTTTCCACCCGGCAATGCG‑TGAATGCCTGATGCGACGCTTGCCGCGTTTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTTGCGTGATTTTGTAGGTCGGATAAGGc < 2:408150/141‑1 (MQ=17) aTAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCCGCTTTAGCGTGATATTGTAGGTCGGATAAGGc > 1:136195/1‑149 (MQ=255) tAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTAGCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCg > 1:833712/1‑149 (MQ=255) aaaCTGCCGATCAATAATTGAATATTGCCTGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGtt < 2:637954/149‑1 (MQ=255) cTGCGGATCAATAATTGAAGATTGCCGGGGATATGCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTAt < 1:920712/149‑1 (MQ=255) tGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATg < 1:195617/149‑1 (MQ=255) tGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGGTTATg > 1:16696/1‑149 (MQ=255) gCGTATCAATAATTGAAGATTGCCGGGGATTTCGAACC‑ATAATAAGTTGAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTCATGc < 2:562715/149‑1 (MQ=11) gCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTGGTAGGTCGGATAAGGCGTTTATGc < 1:1163185/149‑1 (MQ=255) ggATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCg < 1:775588/149‑1 (MQ=255) tcaggcattcacacaTTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCa > 2:606428/15‑149 (MQ=255) aTCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGATCGGATAAGCCGTTTATGCCGCa > 1:263210/1‑149 (MQ=255) cAATAATTGTAGATTGCCGGGTATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGGCGCTTGCCGCGTTTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATc < 2:450574/149‑1 (MQ=255) cAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATc > 1:1137819/1‑149 (MQ=255) aataatTGAAGATTGCCGGGGATATTCACCAGGCCATGTG‑TGTATGCTTGATGCGACGCTTGCCGAATTTTAGCATACCTATGGGGAGCAGCTCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATcc < 1:1211375/149‑1 (MQ=17) aataatTGAAGATTGCCGCGGATATCCACCCGGCAATGTG‑TGAATGCCTGATCCGACGGTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATcc < 1:1098847/149‑1 (MQ=255) atTGAAGTTTGCCGGGGATATCCCCCCGGCAATGGG‑TGAATGCCTGATGCGACGCTTGCCGTGTCTTATCAGGCCTACGCGAGAGAGCGAAAGAGCCTGATTGAGCGGGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACa < 1:377680/149‑1 (MQ=17) gAAGATTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAACGTGATTTTGTAGGTCGGATAAGGCCGTTATGCCGCATCCGACATCa > 1:547369/1‑149 (MQ=255) aaGATTGCCGGGGGTTTCCACCCGGCAATGTG‑TGAATGCGTGAGGCGGGGCGGACCGGGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCaa < 2:1046210/149‑1 (MQ=17) cGGGGTGATCCACCCGGCAATGTG‑TGAATGCCTGACGGGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATGCGACAGCAACGCCTGAt < 2:521771/149‑1 (MQ=17) cGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGAt > 1:507189/1‑149 (MQ=255) ggggATTTCCACGCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCTTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATg < 2:143189/149‑1 (MQ=255) gggATATCCCCCCGGCAATGTG‑TGAATGCCTGATGCAACGCTTGTCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGc < 1:144872/149‑1 (MQ=255) atatCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGAc > 1:1118121/1‑149 (MQ=255) atCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGc > 1:538544/1‑149 (MQ=255) cACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGGAAAGGCATTTATGACGTATCCACAATCTACACCTGATTCGACgttga > 1:892933/1‑145 (MQ=14) cACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGACGCGACGCGTa > 1:1114164/1‑149 (MQ=255) gCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTTTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGCTTTTGTATGTCTGCTCCGCCAGCAAGCCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGt < 1:1211971/149‑1 (MQ=14) cAATGTG‑TGAATGCCTGATGCGACGTTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGAGTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTc < 1:1172180/149‑1 (MQ=255) cAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTc < 2:1061651/149‑1 (MQ=39) aaTGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGCTGCGACGCTTTACGCGTCt > 1:2129/1‑149 (MQ=255) aTGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGcgttaagcgtcgc < 1:699431/149‑13 (MQ=255) tgtg‑tgAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGcgttaagcgtcgca < 1:532435/149‑14 (MQ=255) tg‑tgAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCt < 2:1043587/135‑1 (MQ=35) tg‑tgAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCt > 1:1043587/1‑135 (MQ=35) tgAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGt > 2:621935/1‑80 (MQ=38) tcaaTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGt < 1:621935/78‑1 (MQ=17) tGCCTGATGCCACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCt < 1:427825/149‑1 (MQ=11) | TTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTG‑TGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCT > CP009273/4285652‑4285910 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |