New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 4532507	59 (0.790)	6 (0.090)	5/278	10.4	9.2%	intergenic (+57/‑425)	fimE/fimA	tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin)
	?	CP009273	= 4532803	63 (0.890)					intergenic (+353/‑129)	fimE/fimA	tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin)
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TGTGGCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAA‑GTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGC  >  CP009273/4532658‑4532951                                                                                                                                                   |                                                                                                                                                     tgtgGCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAAATAACAATAGAATATTAAACCAACAAATAAACTGAAAAA‑GTTTGTCCGCGATGATTTCCTCAATGAGTGAAAATgg                                                                                                                                                   >  1:24920/1‑149 (MQ=255)       tCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATCAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAA‑GTTTGTCCGCGATCCTTTCCTCTATGAGTCAAAATGGcgccca                                                                                                                                             >  2:480758/1‑147 (MQ=255)       tCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGAAAACAATAGAATATTAAGCCAACAAATAAACTGAAAAA‑GTTTGTCCGCGATGCTTTCCTCTCTGAGTCAAAATGGCCCaaa                                                                                                                                             >  1:335588/1‑149 (MQ=255)          aCGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAA‑GTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATg                                                                                                                                          >  2:453876/1‑149 (MQ=255)             cATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAA‑GTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGttt                                                                                                                                       <  2:1092287/149‑1 (MQ=255)              aTCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAA‑GTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTc                                                                                                                                      >  2:968719/1‑149 (MQ=255)                 ttCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAA‑GTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATc                                                                                                                                   >  2:9662/1‑149 (MQ=255)                 ttCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAA‑GTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATc                                                                                                                                   >  1:209874/1‑149 (MQ=255)                  tCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAA‑GTTTGTCCGCGATGCTTTCCTCTATGCGTCAAAATGGCCCCAAATGTTTCATCt                                                                                                                                  >  2:117216/1‑149 (MQ=255)                    cTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGTAAATTAAGCCAACAAATAAACTGAAAAA‑GTTTGTCAGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGATTCtttttt                                                                                                                                >  1:1153054/1‑149 (MQ=255)                       agtcttctCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAA‑GTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAACTGTTTCATCTTTTgg                                                                                                                             <  2:686186/147‑1 (MQ=255)                       aTTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAA‑GTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTgg                                                                                                                             <  1:154503/149‑1 (MQ=255)                        ttcttcTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACGATTAAATATTAAGCCAACAAATAAACTGAAAAA‑GTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTggg                                                                                                                            >  1:546695/1‑149 (MQ=255)                           ttctCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAA‑GTTTGTCCGCGATGCTTTCCTCTATGAGCAAAAATTGCCCCAAATTTTTCCTcctcttcgtta                                                                                                                         >  2:185906/1‑139 (MQ=255)                           ttctCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAA‑GATTGACCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGa                                                                                                                         >  1:925723/1‑149 (MQ=255)                            tctctcCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAA‑GTTTGTCCGCGATGCTTTCCTCTATGACTCCCAACGACAACAAATGTTTCATCTTTTGGCGGaa                                                                                                                        <  2:112648/149‑1 (MQ=255)                               ctcCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCAAACAAATAAACTGAAAAAGGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGaaaa                                                                                                                      >  2:18151/1‑149 (MQ=255)                                tcCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAA‑GTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACt                                                                                                                    >  1:345114/1‑149 (MQ=255)                                    aaacCCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAA‑GTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGc                                                                                                                <  1:1132350/149‑1 (MQ=255)                                        ccaccTCATGCAAAATAAACAACTATAAAAAAAAAAAACAATAAAATATAAAGCCAACAAATAATCTGAAAAA‑GTTTGTCCGCGATGCTTTCCTCGATGTATCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAgtg                                                                                                            <  1:117216/149‑1 (MQ=255)                                          accctaggCAATATAAACATATAAAAATAAAGATAACCACATAATATTAAGCCAACAAATAAACTGAAAAA‑GTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCTCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGtt                                                                                                          <  2:560225/142‑1 (MQ=255)                                           cctcctGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATCAACTGAAAAA‑GTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTg                                                                                                         <  2:775913/149‑1 (MQ=255)                                           ccTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAA‑GTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTg                                                                                                         <  1:968719/149‑1 (MQ=255)                                           ccTCATGCAATATAAACAGCTATAAATAAAGAAAACAATAGAATATTAAGCCAACAAATAAACTGAAAAA‑GTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTg                                                                                                         <  1:554594/149‑1 (MQ=255)                                             tCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACAGAAAAA‑GATTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGc                                                                                                       >  1:24963/1‑149 (MQ=255)                                                       taAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAA‑GTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTc                                                                                             >  2:1227091/1‑149 (MQ=255)                                                          aCATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAA‑GTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGtt                                                                                          <  1:453876/149‑1 (MQ=255)                                                           cATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAA‑GTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGttt                                                                                         <  2:935848/149‑1 (MQ=255)                                                                ataaataaAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAA‑GTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaaa                                                                                    >  1:443245/1‑149 (MQ=255)                                                                ataaataaAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAA‑GTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaaa                                                                                    >  1:490904/1‑149 (MQ=255)                                                                   aataaaGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAA‑GTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaaaaca                                                                                 >  2:62754/1‑149 (MQ=255)                                                                    ataaaGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAA‑GTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaaaacaa                                                                                >  2:967069/1‑149 (MQ=255)                                                                    ataaaGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAA‑GTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGCGGAAAACTGTGCAGTATTGGCAGCACAACTCGTTTacaagacaa                                                                                >  2:1047987/1‑149 (MQ=255)                                                                     taaaGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAA‑GTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGCAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTaaaaaacaaa                                                                               >  2:40654/1‑149 (MQ=255)                                                                              cAATAGAATATTAAGCCAACAAATAAACTGAAAAA‑GTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGa                                                                      <  1:1009939/149‑1 (MQ=255)                                                                                 tAGAATATTAAGCCAACAAATAAACTGAAAAA‑GTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACg                                                                   >  1:1136354/1‑149 (MQ=255)                                                                                   gAATATTAAGCCAACAAATAAACTGAAAAA‑GTTTGTCCGCGATGCTTTCGTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGGAAACTTGGCGTGGTTGCCAGTCAACCTCGTTTACAAAACAAAGGGCAAAGaacaac                                                                 >  2:600046/1‑149 (MQ=255)                                                                                    aaTATTTAGCCAACAAATAAACTGAAAAA‑GTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCGCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTATAAAACAAAGTGTACAGAACGACt                                                                <  1:806731/149‑1 (MQ=255)                                                                                    aaTATTAAGCCAACAAATAAACTGAAAAA‑GTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACt                                                                <  2:345114/149‑1 (MQ=255)                                                                                               aacaaATAAACTGAAAAA‑GTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACCAAGTGTACAGAACGACTGCCCATGTCgg                                                     >  2:1107894/1‑148 (MQ=255)                                                                                               aacaaATAAACTGAAAAA‑GTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCGTTTGGGCGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGa                                                     >  2:90680/1‑149 (MQ=255)                                                                                                    aTAAACTGAAATA‑GTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAATTGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAg                                                <  1:623778/149‑1 (MQ=255)                                                                                                             aaaa‑GTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGTAGGAAAACTGTGCAGTGTTGACAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGttt                                       >  1:349251/1‑149 (MQ=255)                                                                                                               aagggttGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGtttt                                      <  1:18151/144‑1 (MQ=255)                                                                                                                a‑GTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTATAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGtttttt                                    <  2:202670/149‑1 (MQ=255)                                                                                                                   tttGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTga                                  <  1:759509/149‑1 (MQ=255)                                                                                                                     tGTCCGCGATTCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaa                                <  2:209874/149‑1 (MQ=255)                                                                                                                     cgTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaa                                <  2:57313/148‑1 (MQ=255)                                                                                                                        ccGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGCTTTAGAAATAGTTTTTTgaaagga                             >  2:399200/1‑149 (MQ=255)                                                                                                                         cgcgATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTATTTgaaaggaa                            >  1:997146/1‑149 (MQ=255)                                                                                                                            gATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAGCGACTGCCCATGTCGGTTTAGAAATAGTTTTTTGAAAGGAAagc                         >  2:439065/1‑149 (MQ=255)                                                                                                                                cTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAgcagca                     >  2:1190235/1‑149 (MQ=255)                                                                                                                                 tttCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTCCAGAACGACTGCCCATGTCGATCTAGAAATAGTTTTTTGAAAGGAAAGCAACAt                    >  2:52050/1‑149 (MQ=255)                                                                                                                                 tgtactctATGATTCAAAATGGCCCCAAATGTTTCATCTTTTTGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTTGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCAt                    <  2:24920/145‑1 (MQ=255)                                                                                                                                      tctATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGaaaa               <  2:443245/149‑1 (MQ=255)                                                                                                                                      tctATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGaaaa               <  2:490904/149‑1 (MQ=255)                                                                                                                                        tcttaGTCAAAATGTCCCCAAAGGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACGGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAAtt             <  2:1227476/145‑1 (MQ=255)                                                                                                                                        tATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAAtt             >  2:186233/1‑149 (MQ=255)                                                                                                                                        tATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCAATGTCGATTAGGAAAAAGTTTTTTGAAAGGAAAGCAGCGTGAGAAtt             >  2:896858/1‑149 (MQ=255)                                                                                                                                            aGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTaaaa         <  1:820270/149‑1 (MQ=255)                                                                                                                                             gTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTAGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATATAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAAc        >  1:111479/1‑149 (MQ=255)                                                                                                                                                aaaaTGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACTACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAActct     <  1:967069/149‑1 (MQ=255)                                                                                                                                                 aaaTGGCCCCAAATGTTTCAGCTTTTGGGGGCAAACTGTGTAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGGCTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTg    <  1:828042/149‑1 (MQ=255)                                                                                                                                                 aaaTGGCCCCAAACGNTTCATCTTTTGGGGGAAAAATGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTg    <  1:1047987/149‑1 (MQ=255)                                                                                                                                                  aaTGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTgg   <  1:9662/149‑1 (MQ=255)                                                                                                                                                   aTGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCACGACGAGGTAGAAACAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGc  >  1:842154/1‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                     TGTGGCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAA‑GTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGC  >  CP009273/4532658‑4532951

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.