Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009273	2,506,454	C→T	intergenic (‑269/‑67)	mntH ← / → nupC	manganese/divalent cation transporter/nucleoside (except guanosine) transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009273	2,506,454	0	C	T	100.0%	259.3 / NA	77	intergenic (‑269/‑67)	mntH/nupC	manganese/divalent cation transporter/nucleoside (except guanosine) transporter
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (38/39);  total (38/39)

TGATGACTTGAATGTTATGGTTATGTTTAATGTTAGCACATTTACATAACTTTCAGCTTCCATACACAACATAGCAGAAATGTATGACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTCGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGAGCAAATATGGACCGCGTCCTTCATTTTGTACTGGCACTTGCCGTTGTTGCGATTCTCGCACTGCTGGTAAGCAGCGACCGCAAA  >  CP009273/2506311‑2506598                                                                                                                                                |                                                                                                                                                  tgatgaCTTGAATGTTATGGTTATGTTTAATGTTAGCGCATTTACATAACTTTCAGCTTCCATACACAACATAGCAGAAATGTATGACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGtttt                                                                                                                                              >  2:560796/1‑149 (MQ=255) tgatgaCTTGAATGTTATGGTTATGTTTAATGTTAGCACATTTACATAACTTTCAGCTTCCATACACAACATAGCAGAAATGTATGACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGtttt                                                                                                                                              <  2:877866/149‑1 (MQ=255) tgatgaCTTGAATGTTATGGTTATGTTTAATGTTAGCACATTTACATAACTTTCAGCTTCCATACACAACATAGCAGAAATGTATGACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGtttt                                                                                                                                              <  2:638545/149‑1 (MQ=255) tgatgaCTTGAATGTTATGGTTATGTTTAATGTTAGCACATTTACATAACTTTCAGCTTCCATACACAAAATAGCAGAAATGTATGACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGtttt                                                                                                                                              >  1:203830/1‑149 (MQ=255)  gatgaCTTGAATGTTATGGTTATGTTCGATGTTAGCACATTTACATAACTTTCAGCTTCCATACACAACATAGCAGAAATGTATGACAGATCACTATTTTTGAAGCCTGTCACAGGACGCCATTATAGTGTGTGTCAGATCTTGTTTTc                                                                                                                                             <  2:171197/149‑1 (MQ=255)   atgaCTTGAAGGTTATGGTTATGTTTAAGGTTAGCACATTTACATAACTTTCAGCTTCCATACACAACATAGCAGAAATGTATGACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTcc                                                                                                                                            <  2:40077/149‑1 (MQ=255)           aaTGTTATGGTTATGTTTAATGTTAGCACATTTACATAACTTTCAGCTTCCATACACAACATAGCAGAAATGTATGACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGAGATTGTTTTCCTTAACCAt                                                                                                                                    >  2:971353/1‑149 (MQ=255)             tGTTATGGTTATGTTTAATGTTAGCACATTTACATAACTTTCAGCTTCCATACACAACATAGCAGAAATGTATGACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGt                                                                                                                                  >  1:586102/1‑149 (MQ=255)               ttatggttatgTTTAATGTTAGCACATTTACATAACTTTCAGCTTCCATACACAACATAGCAGAAATGTATGACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑Ta                                                                                                                               >  2:123181/1‑149 (MQ=255)                tgtggttatgTTTCATGTTAGCACTTTTACATAACTTTCGGCTTCAATACACAACATAGCAGAAATGTATGACAGATCACTTTTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTTTCAGATCTTGTTTTCCTTAGCCATGT‑TAc                                                                                                                              <  2:809306/147‑1 (MQ=255)                 atggttatgTTTAATGTTAGCACATTTACATAACTTTCAGCTTCCATACACAACATAGCAGAAACGTATGACAGATCACTATTTTTGAAGCCTGTCAGAGGACGTCATTATGNTGTGTGTCAGATCTTGTTTTCCTTAACCAAGT‑TGCa                                                                                                                             >  2:632668/1‑149 (MQ=255)                    gttatgTTTAATGTTAGCACATTTACATAACTTTCAGCTTCCATACACAACATAGCAGAAATGTATGACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGAGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAg                                                                                                                          >  2:229560/1‑149 (MQ=255)                         gTTTAATGTTAGCACATTTACATAACTTTCAGCTTCCATACACAACATAGCAGAAATGTATGACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAAtgt                                                                                                                     <  2:762131/149‑1 (MQ=255)                          tttAATGTTAGCACATTTACATAACTTTCAGCTTCCATACACAACATAGCAGAAATGTATGACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCCTGT‑TACATAGACtgtg                                                                                                                    >  2:891352/1‑149 (MQ=255)                          tttAATGTTAGCACATTTACATAACTTTCAGCTTCCATACACAACATAGCAGAAATGTATGACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAAtgtg                                                                                                                    >  2:296778/1‑149 (MQ=255)                          tttAATGTTAGCACATTTACATAACTTTCAGCTTCCATACACAACATAGCAGAAATGTATGACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAAtgtg                                                                                                                    <  2:432505/149‑1 (MQ=255)                             aaTGTTAGCACATTTACATAACTTTCAGCTTCCATACACAACATAGCAGAAATGTATGACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTTCTTAACCATGT‑TACATAGGATGTGCAc                                                                                                                 >  2:532480/1‑149 (MQ=255)                             aaTGCTAGCATATTTACATAACTTTCAGCTTCCATACACAACATAGCAGAAATGTATGACAGATCACTATTTTTGAAGTCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCAc                                                                                                                 <  1:756849/149‑1 (MQ=255)                                 ttAGCACATTTACATAACTTTCAGCTTCCATACACAACATAGCAGAAATGTATGACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGaa                                                                                                             >  1:133180/1‑149 (MQ=255)                                     cacaTTTACATAACTTTCAGCTTCCATACACAACATAGCAGAAATGTATGACAGATCACTATTTTTGAAGCCTGTCACACGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATATAATGTGCACGGCACttt                                                                                                         >  1:800749/1‑149 (MQ=255)                                       caTTTACATAACTTTCAGCTTCCATACACAACATAGCAGAAATGTATGACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCACTATAGTGTGTGTCAGATCTTGTTTTGCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTaa                                                                                                       <  1:649666/149‑1 (MQ=255)                                          ttACATAACTTTCAGCTTCCACACACAACACAGCAGAAATGTATGACAGATCACCATCTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCCCACCTTGTTTCCCTTAACCACCT‑TACATCGCAAGCGCACgcacatcacccct                                                                                                    >  2:776092/1‑137 (MQ=255)                                            aCATAACTTTCAGCTTCCATACACAACATAGCAGAAATGTATGACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGc                                                                                                  <  2:827262/149‑1 (MQ=255)                                              aTAACTTTCAGCTTCCATACACAACATAGCAGAAATGTATGACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGGAAGTGCACGGAAATTTAACCTGCCt                                                                                                >  2:850592/1‑149 (MQ=255)                                               tAACTTTCAGCTTCCATACACAACATAGCAGAAATGTATGACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTc                                                                                               <  2:809455/149‑1 (MQ=255)                                                 aCTTTCAGCTTCCATACACAACATAGCAGAAATGTATGACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCat                                                                                             >  1:937936/1‑149 (MQ=255)                                                      cAGCTTACATACACAACATAGCAGAAATGTATGACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTg                                                                                        <  2:796551/149‑1 (MQ=255)                                                      cAGCTCTCATACCCAACATAGCAGAAAGGCATGCCAGATCACTATTTTTGAAGCTTGTCACAGGACGTCATTTTAGTGTGGGTCAGATCTTGTTCTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTg                                                                                        <  2:188672/149‑1 (MQ=255)                                                       aGCTTTGATACACAACATAGCAGAAATGTATGACAGACCAGTATTTTTGAAGCCTGTCACAGGAAGTCATTATAGGGTGTGTCAGATCTTGTTTTCCTTAATCATGT‑TACATAGAATGTGCATGGAAATTTAACCTGCCTCATATTTgg                                                                                       <  1:297811/149‑1 (MQ=255)                                                        gCTTCCATACACAACATAGCAGAAATGTATGACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGa                                                                                      <  2:528044/149‑1 (MQ=255)                                                        gCTTCCATACACAACATAGCAGAAATGTATGACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGa                                                                                      <  1:928467/149‑1 (MQ=255)                                                           tCCATACACAACATAGCAGAAATGCATGACAGATGACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGAGCa                                                                                   >  1:508674/1‑149 (MQ=255)                                                              aTACACAACATAGCAGAAATGTATGACAGATCACTATTTTTGAAGCCTGTCCAAGGACGTCAGTATAGAGGGTGTCAGAGCTTGTTTTCCTTAACCCTGT‑TACATGGGATGTGCAAGGATATTTCAGCTCCCTCAGATTTGAAGCaaag                                                                                >  2:140800/1‑148 (MQ=255)                                                                acacAACATAGCAGAAATGTATGACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGGAAATTAACCTGCCTCATTTTTTGAGCAAatat                                                                              >  1:459585/1‑149 (MQ=255)                                                                 cccaacaTAGCAGAAATGTATGACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGAGCAAATATg                                                                             <  1:82715/147‑1 (MQ=255)                                                                    aacaTAGCAGAAATGTATGACAGATCACTATTTTTGAAGCCTGTCACACGACGTCAGTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCGTCATATTTGGAGCAAATATGGAc                                                                          >  2:629782/1‑149 (MQ=255)                                                                      caTAGCAGAAATGTATGACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGAGCAAATATGGACcg                                                                        <  2:85909/149‑1 (MQ=255)                                                                       aTAGCAGAAATGTATGACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAGCCTGCCTCCTATTTGGAGCAAATAAGGACagc                                                                       >  2:143376/1‑149 (MQ=255)                                                                       aTAGCAGAAATGTATGACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGAGCAAATATGGACcgc                                                                       >  2:143346/1‑149 (MQ=255)                                                                       aTAGCAGAAATGTATGACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGAGCAAATATGGACcgc                                                                       >  2:444783/1‑149 (MQ=255)                                                                       aTAGCAGAAATGTATGACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGAGCAAATATGGACcgc                                                                       <  1:306849/149‑1 (MQ=255)                                                                         aGCAGAAATGTATGACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCCTTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGAGCAAATATGGGCCGCGt                                                                     >  1:214191/1‑149 (MQ=255)                                                                            aGAAATGTATGACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGAGCAAATATGGACCGCGTCCt                                                                  <  2:848316/149‑1 (MQ=255)                                                                                   tATGACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGAAGCAAATATGGACCGCGTCCTTCAtttt                                                           >  2:143757/1‑149 (MQ=255)                                                                                    aTGACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGCGCAAATATGGACCGCGTCCGTCAttttt                                                          >  2:447296/1‑148 (MQ=255)                                                                                     tGACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGCGCAAATATGGACCGCGTCCTTCATTTTGt                                                         <  2:492450/149‑1 (MQ=255)                                                                                     tGACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGAGCAAATATGGACCGCGTCCTTCAtttgtt                                                         >  1:430656/1‑146 (MQ=255)                                                                                      gACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTTTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTTCCTCATATTTGGAGCAAATATGGACCGCGTCCTTCATTTTGTa                                                        <  2:203830/149‑1 (MQ=255)                                                                                       aCAGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGAGCAAATATGGACCGCGTCCTTCATTTTGTAc                                                       <  2:501156/149‑1 (MQ=255)                                                                                         aGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGAGCAAATATGGACCGCGTCCTTCCTTTTGTACTg                                                     >  1:572523/1‑149 (MQ=255)                                                                                          gATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGTCTCATATTTGGAGCAAATATGGACCGCGTCCTTCATTTTGTACTgg                                                    <  2:507947/149‑1 (MQ=255)                                                                                           aTCACTATTTGTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTCCTCGGATATTTCCCATATTTCATATTTGGAGCAAATATGGACCGCGCCCTTCATTTTGTACTGGc                                                   <  1:734950/149‑1 (MQ=255)                                                                                              aCTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGAGCAAATATGGACCGCGTTCTTCATTTTGTACTggaaat                                                >  2:405268/1‑145 (MQ=255)                                                                                                tATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGAGCAAATATGGACCGCGTCCTTCATTTTGTACTGGCACTTg                                              <  1:111550/149‑1 (MQ=255)                                                                                                     ttGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTCCCATAA‑CTTGTCTACAGAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGAGCAAATATGGACCGCGTCCTTCATTTTGTACTGGCACTTGCCgtt                                         <  1:483286/149‑1 (MQ=255)                                                                                                      tGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGAGCAAATATGGACCGCGTCCTTCATTTTGTACTGGCACTTGCCgttg                                        <  1:296778/149‑1 (MQ=255)                                                                                                         aGCCTGTCACCTGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGAGCAAATATGGACCGCGTCCTTCATTTTGTACTGGCACTTGCCGttgttg                                     <  2:72362/149‑1 (MQ=255)                                                                                                         aGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCCCGGAAATTGAACCTGCCTCATCTTTGGAGCAAATATGGACCGCGTCCTTCATTTTGTACTGGCACTTGCCGttgttg                                     <  1:390331/149‑1 (MQ=255)                                                                                                           ccTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGAGCAAATATGGACCGCGTCCTTCATTTTGTACTGGCACTTGCCGTTGTTGCg                                   >  1:434439/1‑149 (MQ=255)                                                                                                           ccTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGAGCAAATATGGACCGCGTCCTTCATTTTGTACTGGCACTTGCCGTTGTTGCg                                   >  1:10019/1‑149 (MQ=255)                                                                                                                  caGGCCGTCATTATAGTGTGTCACAGATCGTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGAGCAAATATGGACCGCGTCCTTCATTTTGTACTGGCACTTGCCGTTGTTGCGATTCTCg                            >  2:716944/1‑149 (MQ=255)                                                                                                                  caGGACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGAGCAAATATGGACCGCGTCCTTCATTTTGTACTGGCACTTGCCGTTGTTGCGATTCTCg                            <  1:456934/149‑1 (MQ=255)                                                                                                                     gACGTCATTATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGAGCAAATATGGAACGCGACCTGCAGCATGTACTGGCACTTGCCGTTGTTGCGATTCTCGCAc                         >  1:575612/1‑149 (MQ=255)                                                                                                                          cATTATAGTGTGTGTCAGATCTTGTATTCCTTAGCCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGAGCAAGTATGGACTGCGTCCTTCATTTTGTACTGGCATTTGCCGTTGTTGCGATTCTCGCActgctg                    <  1:612308/149‑1 (MQ=255)                                                                                                                          cATTATAGTGTGTGCCAGATCTTGTGTTCCTTATCCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGAAGCAAATATGGACGGCGTCCTTCATTTTGTACTGGCAGTTGCCGTTGTTGCGATTCTCGCActgctg                    <  1:612031/149‑1 (MQ=255)                                                                                                                            ttATAGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGAGCAAATATGGACCGCGTCCTTCATTTTGTACTGGCACTTGCCGTTGTTGCGATTCTCGCACTGCTGGt                  <  1:970161/149‑1 (MQ=255)                                                                                                                               taGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGAGCAAATATGGACCGCGTCCTTCATTTTGTACTGGCACTTGCCGTTGTTGCGATTCTCGCACTGCTGGTAag               <  1:669893/149‑1 (MQ=255)                                                                                                                               taGTGTGTGTCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGAGCAAATATGGACCGCGTCCTTCATTTTGTACTGGCACTTGCCGTTGTTGCGATTCTCGCACTGCTGGTAag               <  1:669903/149‑1 (MQ=255)                                                                                                                                 ttgggttccAGATCTTGTTTTCCGTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGAGCAAATATGGACCGCGTCCTTCATTTTGTACTGGCACTTGCCGTTGTTGCGATTCTCGCACTGCTGGTAagca             <  2:76229/141‑1 (MQ=255)                                                                                                                                  tgtgtgtCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGAGCAAATATGGACCGCGTCCTTCATTTTGTACTGGCACTTGCCGTTGTTGCGATTCTCGCACTGCTGGTAagcag            >  1:847287/1‑149 (MQ=255)                                                                                                                                    tgtgtCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGAGCAAATATGGACCGCGTCCTTCATTTTGTACTGGCACTTGCCGTTGTTGCGATTCTCGCACTGCTGGTAAGCAGCg          >  2:547391/1‑149 (MQ=255)                                                                                                                                     gtgtCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGAGCAAATATGGACCGCGTACTTCATTTTGTACTGGCACTTGCCGTTGTTGCGATTCTCGCACTGCTGGTAAGCAGCGa         <  1:447296/149‑1 (MQ=255)                                                                                                                                      tgtCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGAGCAAATATGGACCGCGTCCTTCATTTTGTACTGGCCCTTGCCGTTGTTGCGATTCTCGCACTGCTGGTAAGCGGCGAc        >  2:208653/1‑149 (MQ=255)                                                                                                                                       gtCAGATCTTGTTTTCCTTAACCATGT‑TACATAGAAAGTGCACGGAAATTTAACCTGCCTCATATTTGGAGCAAATATGGACGGCGTCCTTCATTTTGTACTGGCACTTGCCGTTGTTGCGATTCTCGCACTGCTGGTAAGCAGCGAcc       <  2:85729/149‑1 (MQ=255)                                                                                                                                         cAGATCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGAGCAAATATGGACCGCGTCCTTCATTTTGTACTGGCACTTGCCGTTGTTGCGATTCTCGCACTGCTGGTAAGCAGCGACCGc     >  2:43053/1‑149 (MQ=255)                                                                                                                                            aTCTTGTTTTCCTTAACCATGT‑TACATGGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGAGCAAATATGGACCGCGTCCTTCATTTTGTACTGGCACTTGCCGTTGTTGCGATTCTCGCACTGCTGGTAAGCAGCGACCGCaaa  >  1:799481/1‑149 (MQ=255)                                                                                                                                            aTCTTGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGAGCAAATATGGACCGCGTCCTTCATTTTGTACTGGCACTTGCCGTTGTTGCGATTCTCGCACTGCTGGTAAGCAGCGACCGCaaa  >  1:305389/1‑149 (MQ=255)                                                                                                                                                |                                                                                                                                                  TGATGACTTGAATGTTATGGTTATGTTTAATGTTAGCACATTTACATAACTTTCAGCTTCCATACACAACATAGCAGAAATGTATGACAGATCACTATTTTTGAAGCCTGTCACAGGACGTCATTATAGTGTGTGTCAGATCTCGTTTTCCTTAACCATGT‑TACATAGAATGTGCACGGAAATTTAACCTGCCTCATATTTGGAGCAAATATGGACCGCGTCCTTCATTTTGTACTGGCACTTGCCGTTGTTGCGATTCTCGCACTGCTGGTAAGCAGCGACCGCAAA  >  CP009273/2506311‑2506598

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑