| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 903,388 | A→G | 4.1% | H117H (CAT→CAC) | ybjT ← | putative NAD‑dependent oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 903,388 | 0 | A | G | 4.1% | 267.2 / 2.8 | 99 | H117H (CAT→CAC) | ybjT | putative NAD‑dependent oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base A (47/46); new base G (2/2); total (51/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.56e-02 | |||||||||||
AGGTTGTAGACCATATCGCGCATGACTTCGAACGCCGCGGAACCTGCGCCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGACGTTGAGAGCCACCTGGCGCTCCTGAGCGATAAAATCGCCGCCTTCGCCCATGCTGTGCACCAGAAAATAGACCGTA > CP009273/903242‑903535 | aGGTTGTAGACCATATCGCGCATGACTTCGAACGCCGCGGAACCTGCGCCAACGATAATTCCGGCCCGCAGTTCGGTCACGGTTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACGCCTCAtg > 1:239623/1‑149 (MQ=255) ttGTAGACCATACCGCGCATGACTTCGAACGCCGCGGAACCTGCGCCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTgg < 1:931269/149‑1 (MQ=255) tGTAGACCATATCGCGCATGACTTCGGACGCCGCGGAACCTGCGCCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGc < 2:829194/149‑1 (MQ=255) gcaGACCAGATCGCGCATGACTTCGAACGCCTGGGAACCTGCGCCAACGACAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCGTCACGCAGAATGTCCCATGGTGCGAGTCGAGCACGCAGATGATCCGACTGCTCATGTGGCg < 1:297416/147‑1 (MQ=255) gTAGACCCTATCGCGCATGACTTCGACCGCCGCGGAACCTGCGCCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCg < 1:734578/149‑1 (MQ=255) gTAGACCATATCGCGCATGACTTCGAACGCCGCGGAACCTGCGCCAACGATAATT‑CGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCgg < 1:264990/149‑1 (MQ=255) tAGACCATATCGCGCATGACTTCGAACGCCGCGGAACCTGCGCCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTGGCCTGACGAGCACGCAGATGATCCGGCTGCTCATGTGGCgg > 1:87242/1‑149 (MQ=255) aCCATATCGCGCATGACTTCGAACGCCGCGGAACCTGCGCCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTGGGCGGACGAGGACGCAGATGATCCGACTGCCCATGTGGCGG‑GGc > 1:342236/1‑149 (MQ=255) ccttgtgcggATGACTGCGACCGCCGCGGCACCTGCGCCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACCCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCTACTGCTCATGTGGCGG‑GGccc < 2:433990/143‑2 (MQ=255) cctagcgctCATGACTTCGAACGCCGCGGAACCCGCGCCAACGATAATTCCGTCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACTAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGccc < 1:279235/144‑2 (MQ=255) tctCGCGCAGGACTTCAAGCTGCCCAGAGCCGGCGCCAACGATAATTCCGGCCCGGAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGGCTGCTCATGTGGCGG‑GGCCTGc < 2:562481/147‑1 (MQ=255) tatCGCGCATGACTTCGAACGCCGCGGAACCTGCGCCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGc < 2:739029/149‑1 (MQ=255) tCGCGCATGACTTCGAACGCCGCGGAACCTGCGCCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCGGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCaa > 1:197508/1‑149 (MQ=255) tCGCGCATGACTTCGAACGCCGCGGAACCTGCGCCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCaa < 1:1121405/149‑1 (MQ=255) cgcATGACTTCGAACGCCGCGGAACCTGCGCCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCCCGCAGCTGATCCCACTGCTCATGTGGCGG‑GGCCTGCAActa > 1:427673/1‑147 (MQ=255) cgcATGACTTCGAACGCCGCGGAACCTGCGCCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGa < 2:257310/149‑1 (MQ=255) cgcATGACTTCGAACGCCGCGGAACCTGCGCCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCAGCCGTTGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGa > 1:1212618/1‑149 (MQ=255) tGACTTCGAACGCCGCGGAACCTGCGCCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGTATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTa < 1:81955/149‑1 (MQ=255) tGACTTCGAACGCCGCGGAACCTGCGCCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTa > 1:752407/1‑149 (MQ=255) tGACTTCGAACGCCGCGGAACCTGCGCCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGCCGG‑GGCCTGCAACGAACTa > 1:158446/1‑149 (MQ=255) cTTCGAACGCCGCGGAACCTGCGCCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTaaga > 1:1017906/1‑149 (MQ=255) ttCGAACGCCGCGGAACCTGCGCCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCCACGAACTaagaa > 1:609513/1‑149 (MQ=255) cGAACGCCGCGGAACCTGCGCCAACGATAGTTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGGCGAGCACGCAGATGATCCGACTGCTCCTGTGACGG‑GGCCTGGAACGAACTaaggaag > 1:753158/1‑149 (MQ=255) gAACGCCGCGGAAACTGCGCCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTaagaaaga > 2:756220/1‑149 (MQ=255) aCGCCGCGGAACCTGCGCCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTGATGTGGCGG‑GTCCTGCAACGAACTAAGAAGGAtt > 2:508237/1‑149 (MQ=255) gagcgcAACCTGCGTCAACGATAAGTCCGGCCCGCAGCTCGGTCACGGGGACAGTAGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGAGGATCCTAATGCTCATGTGGCGG‑GGGCTGCAACGAACTAAGAAAGATTAAt < 2:623890/147‑1 (MQ=255) cgGAACCTGCGCCAACGATGATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGc < 1:702572/149‑1 (MQ=255) cgGAACCTGCGCCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAAGGAACTAAGAAAGATTAATTGc > 2:412555/1‑149 (MQ=255) cgGAACCTGCGCCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGc < 2:122176/149‑1 (MQ=255) cgGAACCTGCGCCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAACCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGGACTCAGAAAGATTAAtttg > 1:223528/1‑147 (MQ=255) aCCTGGGCCAACAATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTaa < 2:309367/149‑1 (MQ=255) cTGCGCCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACAGTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACt > 2:572995/1‑149 (MQ=255) tGCGCCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGACGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGACCCAAGGAAGATTAATTGCTTAAcgg > 1:721295/1‑147 (MQ=255) gcgcCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCCTGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTGATTGCTTAACTgg > 1:772045/1‑149 (MQ=255) gcgcCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTgg < 2:863410/149‑1 (MQ=255) gcgcCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTgg < 1:139031/149‑1 (MQ=255) gcgcCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTgg < 1:886170/149‑1 (MQ=255) gcgcCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGAACCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTgg > 2:807438/1‑149 (MQ=255) gcgcCAACGATAATTCCGGCCCGCAGTTCGGCCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTgg > 2:162917/1‑149 (MQ=255) cgcCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGt > 2:904578/1‑149 (MQ=255) cgcCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAAATTAATTGCTTGACTGGt > 1:469453/1‑149 (MQ=255) aaCGATAATTCCGGCCCGAAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACtt > 2:799995/1‑149 (MQ=255) gATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCAc > 1:1155280/1‑149 (MQ=255) aTAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACg < 1:974751/149‑1 (MQ=255) aTAATTCCGGCCCGCAGTTCGGTCACGGGTACATTAGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACg < 1:692362/149‑1 (MQ=255) aTAATTCCGGCCCGCAGTTCGGGCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACg < 1:526890/149‑1 (MQ=255) ttCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAgc > 2:483766/1‑149 (MQ=255) ggCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCaa > 2:134885/1‑148 (MQ=255) cGCAGTTCGGTGACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATcgcg < 2:491553/149‑1 (MQ=255) cGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCCCGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATcgcg > 2:560241/1‑149 (MQ=255) gCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCCTCGCgg > 2:554591/1‑149 (MQ=255) cAGTTCGGTCACTGGCACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCATGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGa < 1:501001/149‑1 (MQ=255) cAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGa < 1:586129/149‑1 (MQ=255) cGGTCACGTGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGACGTTg < 2:238127/149‑1 (MQ=255) cGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATTCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCACATCGCGGACGTTg < 2:1056299/149‑1 (MQ=255) gTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCGTGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGACGTTgag > 2:1107735/1‑149 (MQ=255) gTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCGTGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGACGTTgag > 2:934069/1‑149 (MQ=255) gTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGACGTTgag < 1:1221981/149‑1 (MQ=255) gTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGACGTTgag > 2:815284/1‑149 (MQ=255) gTCACGGGTACATTCGCTTCACGCAGAATGTACCTGGTGGTGTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATGGCGGGCGTTgag > 2:575056/1‑149 (MQ=255) tCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCACCGCGGCCGTTggga > 2:39109/1‑149 (MQ=255) gTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGACGTTGAGAGCCAcc < 1:508237/149‑1 (MQ=255) aTTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTAATGTGGCGG‑GGCCTGCAACGAACTCCGGAAGATTAATCGGTTAACTGGTACTTCACGTAGCGCACCGCGGGCGTAGAGGGCGACCCGgc > 2:961794/1‑149 (MQ=255) cGCTTCGCGCAGAATGGCCGCGGGAGCCGGACGAGCCAGCACATGCACCACCTGCTCAGGTGGCGGCGGCAGGCAGC‑ACGTGGGTATGGTTAGGGGCTTCACTGGTACTTCCCGTAGCGCATCGCGGACGTTGAGCGCCAGGTGGctct < 2:810361/149‑1 (MQ=255) gCTTCACGCATAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATGAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGACGTTGAGAGCCACCTGGCGCTc < 1:930830/149‑1 (MQ=255) cTTCACGCAGAATGTACGAAGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCAGACGTTGAGAGCCACCTGGCGCTca > 1:911098/1‑148 (MQ=255) aCGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGACGTTGAGAGCCACCTGGCGCCCCTGAg > 1:279281/1‑149 (MQ=255) aCGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGGACTTCACGGAGCACATCGCGGACGTGGAGAGCCACCTGGCGCTCCGGAg > 1:871506/1‑149 (MQ=255) gCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGGTTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGACGTTGAGAGCCACCTGGCGCTCCTGGGCg > 1:118933/1‑149 (MQ=255) tCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGACGTTGAGAGCCACCTGGCGCTCCTGAGCGATAAAATc > 2:839124/1‑149 (MQ=255) gCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGACGTTGAGAGCCACCTGGCGCTCCTGAGCGATAAAAGCGCCGCCTTc > 1:436348/1‑149 (MQ=255) ccTGCCGATCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGACGTTGAGAGCCACCTGGCGCTCCTGAGCGATAAAATCGCCGCCTTCg < 2:390166/149‑1 (MQ=255) tGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGACTTTGAGAGCCACCTGGCGCTCCTGAGCGATAAAATCGCCGCCTTCGcc < 1:799995/149‑1 (MQ=255) tGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGACGTTGAGAGCCACCTGGCGCTCCTGAGCGATAAAATCGCCGCCTTCGcc < 2:1017906/149‑1 (MQ=255) tGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGACGTTGAGAGCCACCTGGCGCTCCTGAGCGATAAAATCGCCGCCTTCGcc < 1:1103067/149‑1 (MQ=255) tGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGACGTTGAGAGCCACCTGGCGCTCCTGAGCGATAAAATCGCCGCCTTCGcc < 1:1102940/149‑1 (MQ=255) gCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAAAGGCCCAACAAAGATTAACTGCTTAACTGGTACTTCACGTAGCGCATCGCGGACGTTGAGAGCCACCTGGCGCTCCTGAGCGGTAAAATCGCCGCCTTCGCCCATGCt > 1:1220069/1‑149 (MQ=255) cACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGACGTTGCGAGACATCTGGGCGTCCTGAGCGATAAAATCGCCGCCTTCGCCCATGCtg > 2:566407/1‑149 (MQ=255) aCGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGACGTTGAGAGCCACCTGGCGCTCCTGAGCGATAAAATCGCCGCCTTCGCCCATGCtgt < 2:593142/149‑1 (MQ=255) aCGCAGATGATCCGACTGCTCATGGGGCGG‑CGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGACGTTGAGAGCCACCTGGCGCTCCTGAGCGATAAAATCGCCGCCTTCGCCCATGCtgt < 2:343261/149‑1 (MQ=255) cGCAGATGATCCGACTGCTCGTGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGACGTTGAGAGCCACCTGGCGCTCCTGAGCGATAAAATCGCCGCCTTCGCCCATGCtgtg < 1:1107735/149‑1 (MQ=255) cGCAGATGATCCGACTGCTCGTGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGACGTTGAGAGCCACCTGGCGCTCCTGAGCGATAAAATCGCCGCCTTCGCCCATGCtgtg < 1:934069/149‑1 (MQ=255) gCAGAGGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGACGTTGAGAGCCACCTGGCGCTCCTGAGCGGTGAAACCGCCGCCTTCGCCCATCCCGTGc > 2:1074064/1‑149 (MQ=255) cAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAAATGGTACTTCACGTAGCGCATCGCGGACGTTGAGAGCCACCTGGCGCTCCTGAGCGATAAAATCGCCGCCTTCGCCCATGCTGTGCa < 1:839578/149‑1 (MQ=255) cAGATGACCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGACGTTGAGAGCCACCTGGCGCTCCTGAGCGATAAAATCGCCGCCTTCGCCCATGCTGTGCa < 1:747977/149‑1 (MQ=255) aGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGACGTTGAGAGCCACCTGGCGCTCCTGAGCGATAAAATCGCCGCCTTCGCCCATGCTGTGCAc < 2:338690/149‑1 (MQ=255) gatgatCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGACGTTGAGAGCCACCTGGCGCTCCTGAGCGATACAATCGCCGCCTTCCCCCATGCTCGGCAcc > 2:1117418/1‑149 (MQ=255) gatgatCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGACGTTGAGAGCCACCTGGCGCTCCTGAGCGATAAAATCGCCGCCTTCGCCCATGCTGTGCAcc < 2:158446/149‑1 (MQ=255) atgatCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGACGTTGAGAGCCACCTGGCGCTCCTGAGCGATAAAATCGCCGCCTTCGCCCATGCTGTGCACCa > 2:301592/1‑149 (MQ=255) atgatCCGACTGCGCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGACGTTGAGAGCCACCTGGCGCTCCTGAGCGATAAAATCGCCGCCTTCGCCCATGCTGTGCACCa > 1:253809/1‑149 (MQ=255) atCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGCAAGAGTAATTGCTTAACTGGGACTTCACGTAGCGCATCGCGGACGTGGAGAGGCAACAGGAGCTCCTGAGCGATAAAACCGCCGCCTTCGCCCATGCCGTGCACCAGaa > 2:504834/1‑149 (MQ=255) atCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGACGTTGAGAGCCACCTGGCGCTCCTGAGCGATAAAATCGCCGCCTTCGCCCATGCTGTGCACCAGaa > 2:657801/1‑149 (MQ=255) atCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGACGTTGAGAGCCACCTGGCGCTCCTGAGCGATAAAATCGCCGCCTTCGCCCATGCTGTGCACCAGaa < 2:353581/149‑1 (MQ=255) ccGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGACGTTGAGAGCCACCTGGCGCTCCTGAGCGATAAAATCGCCGCCTTCGCCCATGCTGTGCACCAGaaaa > 1:832513/1‑149 (MQ=255) tGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTGACTGGTACTTCACGTAGCGCATCGCGGACGTTGAGAGCCACCGGGCGCTCCTGGGCGATAAAATCGCCGCATTCGCCCATGCTCGGCACCAGACAATAAAc > 2:1014405/1‑149 (MQ=255) tGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGACGTTGAGAGTCACCTGGCGCTCCTGAGCGATAAAATCGCCGCCTTCGCCCATGCTGTGCACCAGAAAATAGAc < 1:807438/149‑1 (MQ=255) ggCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGACGTTGAGAGCCACCTGGCGCTCCTGAGCGATAAAATCGCCGCCTTCGCCCATGCTGTGCACCAGAAAATAGAc < 1:162917/148‑1 (MQ=255) gCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGACGTTGAGAGCCACCTGGCGCTCCTGAGCGATAAAATCGCCGCCTTCGCCCATGCTGTGCACCCGAAAATAGAcc > 1:1091818/1‑149 (MQ=255) cATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGACGTTGAGAGCCACCTGGCGCTCCCGAGCGATAAAATCGCCGCCTTCGCCCATGCTGTGCACCAGAAAATAGACCGTa < 2:667806/149‑1 (MQ=255) | AGGTTGTAGACCATATCGCGCATGACTTCGAACGCCGCGGAACCTGCGCCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGTCCGCCGTAGCCTGACGAGCACGCAGATGATCCGACTGCTCATGTGGCGG‑GGCCTGCAACGAACTAAGAAAGATTAATTGCTTAACTGGTACTTCACGTAGCGCATCGCGGACGTTGAGAGCCACCTGGCGCTCCTGAGCGATAAAATCGCCGCCTTCGCCCATGCTGTGCACCAGAAAATAGACCGTA > CP009273/903242‑903535 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |