New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 4158301	60 (0.740)	5 (0.110) +AGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAA	3/164	8.5	11.3%	noncoding (2/76 nt)	gltT	tRNA‑Glu
	?	CP009273	= 4199681	83 (1.020)					intergenic (+65/‑21)	rrsE/gltV	16S ribosomal RNA of rrnE operon/tRNA‑Glu
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATATTT  >  CP009273/4158155‑4158449                                                                                                                                                   |                                                                                                                                                      tCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTcc                                                                                                                                                     >  1:201924/1‑149 (MQ=38) tCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTACGTGTcc                                                                                                                                                     >  1:240403/1‑149 (MQ=255)     acaGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTccccgt                                                                                                                                                 >  1:530199/1‑147 (MQ=38)     acaGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTAACCCTACACGAAAGTATCACGCAACGCGGGATAAGCAATTTTCGTGCCCCCtt                                                                                                                                                 >  2:518268/1‑149 (MQ=255)       aGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCACAGCGTGATAAGCAATTTTCGTGTCCCCTTCg                                                                                                                                               >  2:207903/1‑149 (MQ=255)        gATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGt                                                                                                                                              <  1:446993/149‑1 (MQ=37)         aTTGTCTGATAGAAAGTGAAAAGCAAGTCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTc                                                                                                                                             <  1:548155/149‑1 (MQ=37)            gTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCtct                                                                                                                                          >  1:996889/1‑147 (MQ=39)             tgtGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTaga                                                                                                                                         <  2:465254/147‑1 (MQ=37)             tCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTaga                                                                                                                                         >  1:210634/1‑149 (MQ=38)             tCTGATAGAAAGTGAAAAGCAAGGCGTATACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTCTTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTaga                                                                                                                                         <  1:924681/149‑1 (MQ=255)              ttGAGAGAATGGGCAAAGCAAGGCGTTTAGGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTagag                                                                                                                                        <  2:372653/148‑1 (MQ=11)              cTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGGAATTTTCGTGTCCACTTCGTCtcaag                                                                                                                                        >  1:568019/1‑145 (MQ=255)              cTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTagag                                                                                                                                        <  2:596549/149‑1 (MQ=37)               tGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAgg                                                                                                                                       <  1:685272/149‑1 (MQ=37)               tGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAgg                                                                                                                                       >  2:916798/1‑149 (MQ=37)               tGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAgg                                                                                                                                       >  1:143229/1‑149 (MQ=38)               tGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGCCTAGAgg                                                                                                                                       >  2:1167866/1‑149 (MQ=38)                 aTAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGcc                                                                                                                                     >  1:671354/1‑149 (MQ=35)                 aTAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGGGATAAGCAATTTTCGTGTCCCCTGCGACGAGAGGcc                                                                                                                                     >  1:684536/1‑149 (MQ=255)                  tAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGccc                                                                                                                                    <  2:1255433/149‑1 (MQ=35)                   cgAAGGTGAACAGCAAGGCGTTTACGGGTTGGGAGTGAGGCTGAAGAGAATAAGGCCCTTCGCTTTCTATTACTGAAAGCTCACCCTACACGAAGTTATCCCGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCa                                                                                                                                   <  2:875951/148‑1 (MQ=11)                   aGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCa                                                                                                                                   <  1:191089/149‑1 (MQ=33)                    gAAAGTGAAAAGCAAGGGGGTTACGCGTTGGGCGGGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAg                                                                                                                                  <  2:745767/149‑1 (MQ=255)                    gAAAGTGAAAAGCAAGGCTTTGCCACGTGGGGAGCGATGCTTAAGAGAATAATGCCGTTCGCTTTCTATTAATGAATGCTGACCCTTCCCGAAACTATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAg                                                                                                                                  <  2:17626/149‑1 (MQ=11)                    gAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAg                                                                                                                                  <  2:529750/149‑1 (MQ=32)                     aaaGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAgg                                                                                                                                 >  1:406364/1‑149 (MQ=32)                        gTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGACTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGaca                                                                                                                              >  1:675229/1‑149 (MQ=17)                          gAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTGTCGTGTCCCCTTCGTCTAGAGGCCCAGGACAcc                                                                                                                            >  1:995744/1‑149 (MQ=17)                            aaaGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGc                                                                                                                          >  1:503216/1‑149 (MQ=31)                            aaaGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGATCACCCTACACGAAAATATCACGCAACGCGTGATAAGAAATTTTCGTGGCCCCTTCGTCTAGAGGCCCAGGACACCGc                                                                                                                          >  2:592819/1‑149 (MQ=9)                                   ggagTTTACTCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGGGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCa                                                                                                                   >  2:1148445/4‑149 (MQ=0)                                                                                                      cccgaaacGAAACTATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGa                                               <  1:829025/143‑1 (MQ=0)                                                                                                            acGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTaa                                         <  2:210634/149‑1 (MQ=32)                                                                                                            acGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTaa                                         >  1:815872/1‑149 (MQ=32)                                                                                                             cgcaaaTACCACGTAACGCGGGATAAGCAATGTTCGTGTCCGCTTCGTCGAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTAat                                        <  1:1166126/146‑1 (MQ=11)                                                                                                              gAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCCCTTG‑CTGGTTTGTGGTTGAAAGTCGCAGACCTTAata                                       >  1:691251/1‑149 (MQ=255)                                                                                                              gAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCCCTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTAata                                       >  2:1019725/1‑149 (MQ=17)                                                                                                              gAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGGCGAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTAata                                       >  2:320914/1‑149 (MQ=17)                                                                                                              gAAAATATCAAGCAACGCGTGATAAGAAATTTTCGTGTCCCCTTCGTCTAGAGTCCCAGGACACCGCCCTTTCACGCCGGTGACAGTGGTTCGACTCCTCAAGACGACGCCACTTGTCGGGTTTGAG‑GGCAAAGTCGccacccgtcata                                       >  2:805177/1‑139 (MQ=0)                                                                                                                 aattctaCGCAACGGGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTAATAtct                                    <  2:995744/143‑1 (MQ=12)                                                                                                                  ttatCACGCGTTGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCGACTTG‑CTGGGTTGTGAGTGAAAGTCGCCGACCTTAATAtctc                                   >  1:626284/2‑149 (MQ=11)                                                                                                                    atcacgcgttgcgTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCaa                                 >  1:770672/11‑149 (MQ=12)                                                                                                                    atCACGCAACGCGTGATAAGCAATTTTCGTGTGCGTGGTGGGTAGAGGCCCAGGACACCGCCCTTTCCCGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCaa                                 >  1:1311680/1‑149 (MQ=11)                                                                                                                      gaCGCAACGCGTTATAAGCAATTTTCGTGTCCCCTGCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGGGAGTGAAAGTCGCCGACCTTAATATCTCaaaa                               <  2:1178503/148‑1 (MQ=12)                                                                                                                      cgcGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCaaaa                               <  2:449607/147‑1 (MQ=17)                                                                                                                      cACGCAACGGGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCaaaa                               <  2:503216/149‑1 (MQ=17)                                                                                                                      cACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCaaaa                               <  2:209938/149‑1 (MQ=32)                                                                                                                       aCGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTCTGTGAGTGAAAGTCGCCGACCTTACTATCTCAAAAc                              >  2:1135754/1‑149 (MQ=17)                                                                                                                            aCGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTGTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATc                         >  2:1173548/1‑149 (MQ=25)                                                                                                                                 tGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCgg                    >  1:1086944/1‑149 (MQ=40)                                                                                                                                   aTAAGCAATTTTCGTGTCCCTCTCGTCTAGAGGCCCAGGACACCTCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGt                  <  1:452903/149‑1 (MQ=255)                                                                                                                                    tAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGCCAGTTCCTTACCTTAATATCTCAAAACTCATCTTCGGGTg                 <  1:320914/149‑1 (MQ=14)                                                                                                                                     aaGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGACAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGa                >  1:1022094/1‑149 (MQ=255)                                                                                                                                       gCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTCGGGGACGCCACTTG‑GGGGTACGGGAGAGAAAGTCCTCGCCCTTAATATCTCACAACTCCTCTTCGGGTgcag              >  2:173000/1‑146 (MQ=14)                                                                                                                                          aTTTTCGTGTCCCCTTCGTCTAGAGACCCAGGACACCGCCCTTTCACGGCGGTAACGGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CGGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGttt           >  2:1092938/1‑149 (MQ=255)                                                                                                                                            ggtCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTga         <  2:1124258/147‑1 (MQ=255)                                                                                                                                             ttCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTgag        <  2:131750/149‑1 (MQ=255)                                                                                                                                             ttCGGGTCCCCTTCGTCTAGACGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTgag        <  2:555325/149‑1 (MQ=255)                                                                                                                                                  gtCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGT‑ACAGGGGTACGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGGAAGTCGCCGGCCTTAATATCTCAAAACTCGTCTTCGGGTGATGTTTGGGGTAttt  >  2:714517/1‑149 (MQ=11)                                                                                                                                                   |                                                                                                                                                      TCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATATTT  >  CP009273/4158155‑4158449

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.