Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092732,388,2490TC20.9% 115.5 / 10.8 67T93A (ACT→GCT) nuoLNADH:ubiquinone oxidoreductase, membrane subunit L
Reads supporting (aligned to +/- strand):  ref base T (31/22);  new base C (1/13);  total (32/35)
Fisher's exact test for biased strand distribution p-value = 6.36e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

CCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAG‑GTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATA‑AGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTT  >  CP009273/2388101‑2388394
                                                                                                                                                      |                                                                                                                                                 
ccGAGGTACATCAGCGGCCGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAG‑GTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATA‑AGGAAACCCACACCAGt                                                                                                                                                   <  2:193471/149‑1 (MQ=255)
 cGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAG‑GTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATA‑AGGAGACCCACCCCCGTg                                                                                                                                                  >  1:1117329/1‑149 (MQ=255)
     ttccagcgcgcggagGTGGTGGGCAAGTACCAGAACCACCATGCTGGCGATGAACAG‑GTTTGTGTAAGCGAAGAAGCGAGTGTAGCCCTCTTCATCGCGCATATACCAGGAGGCGTACATGTGAATA‑AGGAAACCCACACCAGTGacca                                                                                                                                              <  2:344257/136‑1 (MQ=255)
     gTACAGCAGCAGCACGCTGTCGGCAAGCACCAGAACCAACATGCTGGGGATGAACAG‑GTGAGTGTAAGCGAAGAAGCGAGAGTGGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATA‑AGGAAACCCACACCAGTGacca                                                                                                                                              <  2:99400/149‑1 (MQ=255)
        cATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAG‑GTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCGTATACCAGGAGGCGTACATGTGAGTA‑AGGAGGCGCACACCAGTGGCCACCg                                                                                                                                           >  2:786436/1‑149 (MQ=255)
         aTCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAG‑GTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATA‑AGGAAACCCACACCAGTGACCACCga                                                                                                                                          <  1:54538/149‑1 (MQ=255)
          tCAGCAGCAGGTTGTCGGCAAGCACCAGAGCCACCAGGCTGGCGGTGAACAG‑GTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATA‑AGGAAACCCACACCAGTGACCACCgag                                                                                                                                         >  2:453492/1‑149 (MQ=255)
          tCAGCAGCAGGTTGACGCCAAGAACCAAAACCACAATGCTGGCGATG‑ACAGAGATGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCCCCGCGCGTATACCAAGCGGCGTACATGTGAATA‑GGGAATCCCACACCAGCGACCACCgag                                                                                                                                         >  2:453848/1‑149 (MQ=255)
           cagcagcagGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAG‑GTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCAGATACCAGGAGGCGTACATGTGAATA‑AGGAAACCCACACCAGTGACCACCgaga                                                                                                                                        >  2:143332/1‑149 (MQ=255)
            agcagcagGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAG‑GTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATA‑AGGAAACCCACACCAGTGACCACCGagag                                                                                                                                       >  1:618596/1‑149 (MQ=255)
                 cagGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAG‑GTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATA‑AGGAAACCCACACCAGTGACCACCGAGAGCAggg                                                                                                                                  >  2:1174038/1‑149 (MQ=255)
                      tGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAG‑GTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGGACATGTCAATA‑AGGAAACACACAGCAGTGACCCCCGAGAGCCCGGGCAGc                                                                                                                             >  2:1187234/1‑149 (MQ=255)
                      tGTCGCCCAGCACCAGAACCACCATGCTCGCGACGAACAG‑GTTGCTCTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATACACAAGACGGAGTACATGTTAATA‑ATTAATAACGATCCAGCGACCACCGAGAGCATGGTCAGc                                                                                                                             <  2:999032/149‑1 (MQ=255)
                        tCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAG‑GTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATA‑AGGAAACCCACACCAGTGACCACCGAGAGCATGGTCGGCGa                                                                                                                           >  1:389911/1‑149 (MQ=255)
                         cGGCAAGCACCAGAACCACCATGCTGGCGATGAACAG‑GTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATA‑AGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGAc                                                                                                                          <  1:870348/149‑1 (MQ=255)
                            cAAGCCCCAGAACCACCATTCTGGCGATTAACAG‑GTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCCCATATACCAGGAGGCGTACATGTGTTTATTGTTAACTGATA‑CGGCGACCACCGAGAGCATGGTCAGCGACAgg                                                                                                                       <  2:530656/149‑1 (MQ=255)
                                 cccAGATCCACCATGGTGGGTATGAACAG‑GTTGGTGTAAGCGAACAGGCGAGAGTAGCCCTCTTCACCGCGCATATTCCAGGCGGCGCACATGTGTTTT‑TGTTTTAATGCTACGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTc                                                                                                                  <  2:587739/148‑1 (MQ=255)
                                 aCCAGAACCACCATGCTGGCGATGAACAG‑GTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATA‑AGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTc                                                                                                                  >  2:771419/1‑149 (MQ=255)
                                 aCCAGAACCACCATGCTGGCGATGAACAG‑GTTGGTGTAAGCGAAGAAGCGAGAGTACCCCTCTTCACCGCGCATATACCAGGAGGCGTACAAGTGAATA‑AGGAAACCCACACCAGTGACCCCCGAGAGCACGGCCACCGCCAGCCCgcg                                                                                                                  >  2:674410/1‑147 (MQ=255)
                                        ccaccaTGCTGGCGATGAATAG‑GTTGGTGTAAGCGAAGAAGCGAGATTAGCCCTCTTCACCGCGCATCTACCAGGAGGCGTACATGTGAATA‑AGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCAcc                                                                                                           <  1:519497/149‑1 (MQ=255)
                                         caccaTGCTGGCGATGAACAG‑GTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCAAATACCAGGAGGCGTACATGTGAATA‑AGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCa                                                                                                          >  1:677541/1‑149 (MQ=255)
                                         caccaTGCTGGCGATGAACAG‑GTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTCCACCGCGCATACACCAGGAGGCGTACATGTGAATA‑AGGAAACCCACAACAGTGACCGCCGAGAGCAGGGACAGGGACAGACCGTGCAacacaa                                                                                                          >  2:535938/1‑147 (MQ=255)
                                                  ggCGATGAACAG‑GTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATGCCAGGAGGCGTACATGTGAATA‑AGGAAACCCACACCAGTGGCCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAAc                                                                                                 >  2:1043990/1‑149 (MQ=255)
                                                  ggCGATGAACAG‑GTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATA‑AGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAAc                                                                                                 <  1:928004/149‑1 (MQ=255)
                                                  ggCGATGAACAG‑ACTAGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTGCACCGCGCATATACCAGGAGGCGTACATGTGAATA‑AGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAAc                                                                                                 <  1:1159769/149‑1 (MQ=255)
                                                      ttgacaaG‑GTGGGTGAAAACGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATTGACCAGGAGGCGTACATGTGATTT‑ATTTATCCCGATACGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGAt                                                                                             <  2:380322/143‑1 (MQ=255)
                                                       tGAACAG‑GTTGGTGTAAGCGAACAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATA‑AGGAAACCTACACCAGTGTCCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATg                                                                                            <  1:861106/149‑1 (MQ=255)
                                                           cAG‑GTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATA‑AGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTaa                                                                                        >  1:117690/1‑149 (MQ=255)
                                                               gTTGGTGTAAGCGACGAAGCGAGAGCAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATA‑AGGAAACCCACACCAGTAACCACCGTGAGCATGGTCAGCGACAGGCCGTGCAGCACCAGGTTAAAACCGATGTTAAAGt                                                                                     <  1:810864/149‑1 (MQ=255)
                                                                gtGGTGTAAACGAAGAAGCGAGATGAGCCCTTCTCACCGCGCACATACCAGGAGGCGTACATGTGAATA‑TGTTCTCCTCTTACTGCGTCCACCGAGATCACGGTCAGCTACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTc                                                                                    <  2:612701/148‑1 (MQ=255)
                                                                   gtgtAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGATTA‑ATGTATACCGCACCCGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGcc                                                                                 <  2:688328/149‑1 (MQ=255)
                                                                   gtgtAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATA‑AGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGcc                                                                                 >  1:137898/1‑149 (MQ=255)
                                                                     gtAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATA‑AGGGAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTa                                                                               >  1:773097/1‑149 (MQ=255)
                                                                      tAAGCGGAGAAGCGAGAGGAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATA‑AGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTAc                                                                              <  1:28372/149‑1 (MQ=255)
                                                                      tAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATA‑AGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTAc                                                                              >  1:989868/1‑149 (MQ=255)
                                                                           gaagaaGTGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATA‑AGGACACCCCCACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAAGTTAACACCGATGAGAAAGCCGCCTAccagca                                                                         >  2:382545/1‑145 (MQ=255)
                                                                           gaagaaGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGATTA‑TGTTTACCTGCACCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACa                                                                         <  2:832422/149‑1 (MQ=255)
                                                                           gaagaaGCGAGAGTAGCCCTCGTCACCGCGCATATACCAGGGCGCGTACATGTGTTTT‑ATGATTAACGCTCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACa                                                                         <  2:1232250/149‑1 (MQ=255)
                                                                              gaagCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATA‑AGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATcc                                                                      <  1:194872/149‑1 (MQ=255)
                                                                                  cGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATA‑AGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCAAGCACCAGGCTAAAACCGCTGTCAAAGTCGCCACCCGGCAGCCACGt                                                                  >  2:1200319/1‑149 (MQ=255)
                                                                                      agTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATA‑AGGAAACCCACACCAGTGACCACCGAGAGCATgg                                                                                                                                  >  2:751011/1‑81 (MQ=255)
                                                                                      agTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATA‑AGGAAACCCACACCAGTGACCACCGAGAGCATgg                                                                                                                                  <  1:751011/81‑1 (MQ=255)
                                                                                      agTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATA‑AGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCcac                                                              >  1:1192739/1‑149 (MQ=255)
                                                                                         aGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATA‑AGGAAACCCACACAAGTGACCCCCGAGAGCATGGACGGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTCACGTCGCCGACCGACACCGAGGTCCACAGc                                                           >  2:546760/1‑149 (MQ=255)
                                                                                          gCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATA‑AGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCg                                                          >  1:475002/1‑149 (MQ=255)
                                                                                           cccTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATA‑AGGAAACCCACACCAGTGACCACCGAGAGCGTGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAGACCGATGTTAAAGTCGCCTACGGACATCGACGTCCACTGCgg                                                         >  1:586117/1‑149 (MQ=255)
                                                                                           cccTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATA‑AGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTAAAAACCGCTGTTAAAGTCGCCTACCGCCACCCACGCCCACAGCgg                                                         >  2:368522/1‑149 (MQ=255)
                                                                                               ctTCACCGCGCATATACCAGGAGGCGTACATGTGAATA‑TGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAATTCGCCTACCGACATCCACGTCCACAGCggctgg                                                     <  1:203879/149‑1 (MQ=255)
                                                                                                     cgccCATATACCAGGGGGCGTACAGGTGAATA‑AGGGATCCTGCCACGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTAt                                               <  2:41667/149‑1 (MQ=255)
                                                                                                          atatACCAGGAGGCGTACATGTGAATA‑TGGTATCCCGCTCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTg                                          <  2:1171255/149‑1 (MQ=255)
                                                                                                           tataCCAGGAGGCGTACATGTGAATT‑AGGATTCCCGCTCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGc                                         <  2:235873/149‑1 (MQ=255)
                                                                                                           tataCCAGGAGGCGTACAGGTGAATA‑AGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGc                                         <  1:619425/149‑1 (MQ=255)
                                                                                                                cAGGAGGCGTACATGTGAGTA‑TTGAAACCCGCTCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACCTACACGTCCACAGCGGCTGGCTGTATGTCTGCTCGcc                                    <  2:618596/149‑1 (MQ=255)
                                                                                                                cAGGAGGCGTACATGTGAATA‑AGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGcc                                    >  1:844819/1‑149 (MQ=255)
                                                                                                                 aggcggCGTACATGTGAATA‑AGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAACCCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCg                                   <  1:143332/149‑1 (MQ=255)
                                                                                                                    aggCGTACATGTGAATA‑AGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTa                                <  1:453492/149‑1 (MQ=255)
                                                                                                                             tgtgAATA‑AGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCAGCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGaaa                       >  1:887946/1‑149 (MQ=255)
                                                                                                                             tgtgAATA‑AGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGaaa                       >  1:593550/1‑149 (MQ=255)
                                                                                                                              gtgATTA‑ACGCATCCCACACCAGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAAt                      <  2:906052/149‑1 (MQ=255)
                                                                                                                               tgATTA‑TGGCAACCTGCACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATc                     <  2:948489/149‑1 (MQ=255)
                                                                                                                               ggAATA‑AGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATc                     <  1:1043990/148‑1 (MQ=255)
                                                                                                                                 aaTA‑AGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCaa                   >  1:105579/1‑149 (MQ=255)
                                                                                                                                  aTA‑AGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAAc                  <  1:771419/149‑1 (MQ=255)
                                                                                                                                             ccACACCCGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACACCGATAAAg        <  2:263025/149‑1 (MQ=255)
                                                                                                                                               acacCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGGTAACACCGACGTCAACGTCGCCTACCGACATCCCCGTCCACAGCGGCTGGCTGCATGTCTGCTCGCCGGTAGCGCAGAAATCACCGCCGCAAAAGGc      >  2:841228/1‑149 (MQ=255)
                                                                                                                                                ccccAGTTACCACCGAAATCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGCCGCCTACCGACATCCACGCCCACACCGGCTGTCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACCCCGATAAAGGCg     <  1:786436/147‑1 (MQ=255)
                                                                                                                                                   cggTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGtt  <  2:1301373/147‑1 (MQ=255)
                                                                                                                                                   cAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGtt  >  1:103518/1‑149 (MQ=255)
                                                                                                                                                      |                                                                                                                                                 
CCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAG‑GTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATA‑AGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTT  >  CP009273/2388101‑2388394

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑