New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4542690	28 (0.280)	4 (0.040)	4/456	8.9	9.3%	intergenic (+57/‑425)	fimE/fimA	tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin)
	?	NC_000913	= 4542986	51 (0.530)					intergenic (+353/‑129)	fimE/fimA	tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin)
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

AAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCTATATGTAAAGCTAACGTTTCTGTGGCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAA‑GCCAACAAATAAACTGAAAAAGT‑TTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCGTTGTTCTGTCGGCTCTGTCCCTCAGTTCTACAGCGGCTCTGGCCGCTGCCACGACGGTTAATGGTGGGACCGTTCACTTTAAAGGGGAAGTTGT  >  NC_000913/4542736‑4543233                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                        aaaaTATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCTATATGTAAAGCTAACGTTTCTGTGGCTCGACGCAGCTTCCTCATTCTTCTCCCCAAAAACCACTTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAA‑GCCAACAAATAAACCGAAAAGAT‑TTGTCCGCGTTGCTTTCCTCTATGAGTCaaaa                                                                                                                                                                                                                                                         >  2:455580/1‑251 (MQ=255)                 aCAAAAAGCATCCAACTGTTTGATATTTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCTATATGGAAAGCTAACGTTTCTGTGGCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAA‑GCCAACAAATAAACTGAAAAAGT‑TTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTc                                                                                                                                                                                                                                         <  2:45214/251‑1 (MQ=255)                                                                       cacaTCACCTCCGCTATATGTAAAGCTAACGTTTCTGTGGCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAA‑GCCAACAAATAAACTGAAAAAGT‑TTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACt                                                                                                                                                                                                 <  1:298351/237‑1 (MQ=255)                                                                                 ccGCTATATGTAAAGCTAACGTTTCTGTGGCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACAGCTATAAATAAAGATAACAATAGAATATTAA‑GCCAACAAATAAACTGAAAAAGT‑TTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTc                                                                                                                                                                                                <  2:99314/228‑1 (MQ=255)                                                                                   gCTATATGTAAAGCTAACGTTTCTGTGGCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAA‑GCCAACAAATAAACTGAAAAAGT‑TTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaaaacaaa                                                                                                                                                                                  <  2:630407/240‑1 (MQ=255)                                                                                               gCTAACGTTTCTGTGGCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAA‑GCCAACAAATAAACTGAAAAAGT‑TTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGt                                                                                                                                                           >  1:259235/1‑251 (MQ=255)                                                                                               gCTAACGTTTCTGTGGCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAA‑GCCAACAAATAAACTGAAAAAGT‑TTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAAAAAAGGGTACAGactgtctcttataca                                                                                                                                                           >  2:298427/1‑237 (MQ=255)                                                                                                    cGTTTCTGTGGCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAA‑GCCAACAAATAAACTGAAAAAGT‑TTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGTAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGAtt                                                                                                                                                      >  2:31108/1‑251 (MQ=255)                                                                                                      tttCTGTGGCTCGACGCATCTTCCTCATTCTTCTCTCCACAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAA‑GCCAACAAATAAAGCGAAAAAGT‑TTGTCCGCGATGCCTTCCTCTATGAGTCAAAATGGCCCAAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTTGTGCCAGTCAAACTAGTTTACACAACAAAGTGTACAGAACGAGTGCCCATGTTGAGTTa                                                                                                                                                    >  1:532099/1‑251 (MQ=255)                                                                                                         cTGTGGCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAA‑GCCAACAAATAAACTGAAAAAGT‑TTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGaa                                                                                                                                                                        >  1:99268/1‑228 (MQ=255)                                                                                                           gtgGCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAA‑GCCAACAAATAAACTGAAAAAGT‑TTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTc                                                                                                                                                          >  1:630291/1‑240 (MQ=255)                                                                                                           gtgGCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAA‑GCCAACAAATAAACTGAAAAAGT‑TTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAAt                                                                                                                                               <  1:576572/251‑1 (MQ=255)                                                                                                                tCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAA‑GCCAACAAATAAACTGAAAAAGT‑TTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGttt                                                                                                                                          >  2:576681/1‑251 (MQ=255)                                                                                                                                               aaCCGCCTCATGCAATATAAACAACAATAAATAAAGATAACAATAGACACTTAA‑GCCAACAAATAAACCGAAAAAGT‑TTGTCCGCGATGCTTTCCTCTCTGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGAGAGAAAACTGTACAATTTTGGCAGTCAAACTCGATTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTGTTTTGAAAGGAAAGAAGCATGAAACtttcccc                                                                                                           <  1:254801/251‑6 (MQ=255)                                                                                                                                                   accaaaTGCAACATAAACATCTATAAATAAAGATAACAATCGAATATTAA‑GCCAACAAATAAACTGAAAAAGT‑ATGTCCGCGATGTATTCCTCTATGAGTTAAAATGGCCCAAAATGTTTCATCTTTTGGGGGAAAAATGTGCAGTGCTGTAAGTCAAAATCGTTTAAAAAATAAAGTGTACAGAACGACTTTCCATGTCGATTTAGAAATCGTCTTTTGAAAGGAAAGCAGCAAAAAAGTTAAAAATCTg                                                                                                       >  2:301070/6‑251 (MQ=255)                                                                                                                                                                   atagacaaaaataaaGATAACAATAGAGTATTAA‑GCCAACAAATAAACTGAAAAAGT‑TTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGAGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAGACAAATTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCGTTGTTCTGt                                                                                       <  1:271435/243‑1 (MQ=255)                                                                                                                                                                   aCATCTATAAATAAAGATAACAATATAATATTAA‑GCCAACAAATAAACTGAAAAAGT‑TTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCGTTGTTCTGt                                                                                       <  1:456973/251‑1 (MQ=255)                                                                                                                                                                              ataagaaaaacaTAGAATATTAATGCCAAAAAAT‑AACCGAGACAGTGTTTCCCGCAGTCCTTTCCTTTATGGGTCAAAATGGCCAC‑AATCTTTCAGCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTAGAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAGAATTGAAACTCTGGCAATCGTTGTTCTGTCGGCTCTGTcc                                                                            <  2:447480/240‑1 (MQ=255)                                                                                                                                                                                  gATAACAATAGAATATTAA‑GCCAACAAATAAACTGAAAAAGT‑TTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCGTTGTTCTGTCGGCTCTGTCCCTCa                                                                        >  2:457075/1‑251 (MQ=255)                                                                                                                                                                                      aCAATAGAATATTAA‑GCCAACAAATAAACTGAAAAAGT‑TTGTCCGCGATGCTTTCCTCTATGAGTCGAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCgt                                                                                               <  1:138654/224‑1 (MQ=255)                                                                                                                                                                                         aTAGAATATTCA‑GCCAACAAAAAAACTGAAAAAGT‑TTTTCCGCGATGCTTTCCTCTATGGGTCAAAATGGCCCCAAATGTTTCTTCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaaggaaag                                                                                                                             <  2:895801/191‑1 (MQ=255)                                                                                                                                                                                         aTAGAATATTAA‑GCCAACAAATAAACTGAAAAAGT‑TTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCGTTGTTCTGt                                                                                       <  1:59929/229‑1 (MQ=255)                                                                                                                                                                                              atatTAA‑ACCAACAAATAAACTGAAAAATT‑TTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTCCAATGTTGGCAGTCAAACTCGTTTacaaaacaaa                                                                                                                                                                                  <  1:868354/133‑1 (MQ=255)                                                                                                                                                                                               tatTAA‑GCCAACAAATAAACTGTAAAAGT‑TTGTCCGCTATGCTATCCTCTATGAGTCAAAATGGCCCCAAATGTTTCACCTTCTGGGGGAAAACTGTGCAGTGTTGGTAGTCAAACTCGTTTACAAAATCAAGTGTACAGAACGACTGACAATGTCGATATCGAAACAGTTCTTCGAATGCATAGCAGCATGAAAATTAAAACTCTGGCAATCGTTGTTCTTTCGCTTCTGCCCCTCAGTTCTACACCGGc                                                           >  2:439325/1‑251 (MQ=255)                                                                                                                                                                                               tatTAA‑GCCAACAAATAAACTGAAAAAGT‑TTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGaaaa                                                                                                                  <  2:1025053/196‑1 (MQ=255)                                                                                                                                                                                                   aa‑GCCAACAAATAAAATGAAAAAGT‑TTATCCGCGATGCTTTCCTCTATGAGTCAAAATGACCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGGACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCGTTGTTCTGTCGGCTCTGTCCCTCAGTTCTACAGCGGCTCTg                                                       <  1:263348/251‑1 (MQ=255)                                                                                                                                                                                                         gacaaATAAACTGAAAAAGT‑TTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCGTTGTTCTGTCGGCTCTGTCCCTCAGTTCTACAGCGGCTCTGGCCGc                                                  <  1:492377/250‑1 (MQ=255)                                                                                                                                                                                                               tAAACTGAAAAAGT‑TTGTCCGCGATGCTTTCCTCTATGAGTCGAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCGTTGTTCTGTCGGCTCTGTACCTCAg                                                                       >  2:138706/1‑224 (MQ=255)                                                                                                                                                                                                                aagcTGAAAAAGT‑TTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTAGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACGCTGGCAATCGTTGTTCTGTCGGCTCTGTCCCTCAGTTCTACAGCGGCTCTGGCCGCTGCCacg                                           <  1:455478/248‑1 (MQ=255)                                                                                                                                                                                                                aaaCTGAAAAAGT‑TTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCGTTGTTCTGTCGGCTCTGTCCCTCAGTTCTACAGCGGCTCTGGCCGCTGCCacg                                           >  1:978604/1‑251 (MQ=255)                                                                                                                                                                                                                aaaCTGAAAAAGT‑TTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCGTTGTTCTGTCGGCTCTGTCCCTCAGTTCTACAGCGGCTCTGGCCGCTGCCacg                                           >  1:113002/1‑251 (MQ=255)                                                                                                                                                                                                                aaaCTGAAAAAGT‑TTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCGTTGTTCTGTCGGCTCTGTCCCTCAGTTCTACAGCGGCTCTGGCCGCTGCCacg                                           >  1:194761/1‑251 (MQ=255)                                                                                                                                                                                                                  aCTGAAAAAGT‑TTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCTCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGc                                                                                                     >  1:895635/1‑191 (MQ=255)                                                                                                                                                                                                                  aCTGAAAAAGT‑TTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCGTTGTTCTGTCGGCTCTGTCCCTCAGTTCTACAg                                                               >  2:59971/1‑229 (MQ=255)                                                                                                                                                                                                                  aCTGAAAAAGT‑TTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCGTTGTTCTGTCGGCTCTGTCCCTCAGTTCTACAGCGGCTCTGGCCGCTGCCacgac                                         >  1:786664/1‑251 (MQ=255)                                                                                                                                                                                                                  aCTGAAAAAGT‑TTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCGTTGTTCTGTCGGCTCTGTCCCTCAGTTCTACAGCGGCTCTGGCCGCTGCCacgac                                         >  1:736613/1‑251 (MQ=255)                                                                                                                                                                                                                  aCTGAAAAAGT‑TTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCGTTGTTCTGTCGGCTCTGTCCCTCAGTTCTACAGCGGCTCTGGCCGCTGCCacgac                                         >  1:516268/1‑251 (MQ=255)                                                                                                                                                                                                                   cTGAAAAAGT‑TTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCCAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCGTTGTTCTGTCGGCTCTGTCCCTCAGTTCTACAGCGGCTCTGGCCGCTGCCacgacg                                        <  2:192325/251‑1 (MQ=255)                                                                                                                                                                                                                       aaaaGT‑TTGTCCGCGCTGCTTTCCTCTATGAGTCCAAACCGCCCCAAATGTTTCATCTCTTGGGGTCAAACTTTGCAGTGTTTGCTTTCACACTCGTTTACAAACCAAAGTGTCCAGAAGGACTGCCCTTGTCGATTTCGAAATGGTTATTTGATAGGAAAGCAGCCTGCTATTTAAACCTCTCGCAATCGTTGTTCTGTCGGCTCTGTCCCTCAGTTTTACTGCGCCTCTGGCCGCCGCTCCGACGGtac                                    >  2:723967/1‑249 (MQ=255)                                                                                                                                                                                                                       aaaaGT‑TTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAACACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTc                                                                                                                                                          >  2:868519/1‑133 (MQ=255)                                                                                                                                                                                                                       aaaaGT‑TTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCGTTGTTCTGTCGGCTCTGTCCCTCAGTTCTACAGCGGCTCTGGCCTCTGCCACGACGGTTa                                    >  1:841831/1‑251 (MQ=255)                                                                                                                                                                                                                       aaaaGT‑TTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCGTTGTTCTGTCGGCTCTGTCCCTCAGTTCTACAGCGGCTCTGGCCGCTGCCACGACGGTTa                                    >  2:14997/1‑251 (MQ=255)                                                                                                                                                                                                                       aaaaGT‑TTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCGTTGTTCTGTCGGCTCTGTCCCTCAGTTCTACAGCGGCTCTGGCCGCTGCCACGACGGTTa                                    >  1:8173/1‑251 (MQ=255)                                                                                                                                                                                                                       aaaaGT‑TTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCGTTGTTCTGTCGGCTCTGTCCCTCAGTTCTACAGCGGCTCTGGCCGCTGCCACGACGGTTa                                    >  1:192269/1‑251 (MQ=255)                                                                                                                                                                                                                        aaaGT‑TTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCGTTGTTc                                                                                          >  1:1024866/1‑196 (MQ=255)                                                                                                                                                                                                                                      ttaagagacagctATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCGTTGTTCTGTCGGCTCTGTCCCTCAGTTCTACAGCGGCTCTGGCCGCTGCCACGACGGTTAATGGTGGGACCGtt                      <  2:591464/240‑1 (MQ=255)                                                                                                                                                                                                                                              ccTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCGTTGTTCTGTCGGCTCTGTCCATCAGTTTTACAGCGGCCTTGGCCGCTGCCCCGCCGGTTAATGGTGGGACCGTTAACTTTaa              >  2:537359/1‑251 (MQ=255)                                                                                                                                                                                                                                                 cgaTGAGTCCAAATGGCCCCAAATGTTTCATCTTTTGGAGGAAAACTGGGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCGTTGTTCTGTCGGCTCTGTCCCTCAGTTCTACAGCGGCTCTGGCCGCTGCCACGACGGTTAATGGTGGGACCGTTCACTTTAAAgg           <  2:259307/249‑1 (MQ=255)                                                                                                                                                                                                                                                    tGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCGTTGTTCTGTCGGCTCTGTCCCTCAGTTCTACAGCGGCTCTGGCCGCTGCCACGACGGTTAATGGTGGGACCGTTCCCTGTAAAGGGGa        >  1:626683/1‑251 (MQ=255)                                                                                                                                                                                                                                                          aaaaTGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTTCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAGCGACTGCCGATGTCGATTTAGAAATAGTTTTTTGAAAGGCAAGCAGCATGAAAATTAAAACTCTGGCAATCGTTGTTCTGTCGGCTCTGTCCCTCAGTTCTACAGCGGCTCTGGCCGCTGCCACGACGGTTAATGGTGGGACCGTTCACTTTAAAGGGGAAgttgt  <  2:8206/251‑1 (MQ=255)                                                                                                                                                                                                                                                          aaaaTGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGTAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCGTTGTTCTGTCGGCTCTGTCCCTCAGTTCTACAGCGGCTCTGGCCGCTGCCACGACGGTTAATGGTGGGACCGTTCACTTTAAAGGGGAAgttgt  <  1:31075/251‑1 (MQ=255)                                                                                                                                                                                                                                                          aaaaTGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCGTTGTTCTGTCGGCTCTGTCCCTCAGTTCTACAGCGGCTCTGGCCGCTGCCACGACGGTTAATGGTGGGACCGTTCACTTTAAAGGGGAAgttgt  <  2:786814/251‑1 (MQ=255)                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                        AAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCTATATGTAAAGCTAACGTTTCTGTGGCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAA‑GCCAACAAATAAACTGAAAAAGT‑TTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCGTTGTTCTGTCGGCTCTGTCCCTCAGTTCTACAGCGGCTCTGGCCGCTGCCACGACGGTTAATGGTGGGACCGTTCACTTTAAAGGGGAAGTTGT  >  NC_000913/4542736‑4543233

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.