| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,257,754 | G→A | 6.3% | V5I (GTC→ATC) | dinF → | oxidative stress resistance protein; putative MATE family efflux pump; UV and mitomycin C inducible protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,257,754 | 0 | G | A | 6.3% | 403.0 / 10.3 | 127 | V5I (GTC→ATC) | dinF | oxidative stress resistance protein; putative MATE family efflux pump; UV and mitomycin C inducible protein |
| Reads supporting (aligned to +/- strand): ref base G (56/63); new base A (3/5); total (59/68) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.23e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 127 total aligned reads displayed.
TTGCCAGAAAATAGCGAGTTTAAACCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTTCTCCAATATCACCGTTCCGTTGCTGGGACTGGTCGATACGG > NC_000913/4257616‑4257895 | ttGCCAGAAAATAGCGAGGTTAAACCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGGTTGGGGTTCTTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGgtttg < 3:80110/149‑1 (MQ=255) ccAGAAAATAGCGAGTTTAAACCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGgtttgttt < 5:337538/149‑1 (MQ=255) cAGAAAATAGCGAGTTTAAACCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGtttt > 3:143182/1‑149 (MQ=255) cAGAAAATAGCGAGTTTAAACCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGtttt > 8:176796/1‑149 (MQ=255) gAAAATAGCGAGTTTAAACCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGttttt > 4:292213/1‑148 (MQ=255) aGTTTAAACCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGGTTTT‑CATCTCTCtt > 3:63765/1‑148 (MQ=255) tttAAACCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTtcat < 8:316848/149‑1 (MQ=255) aaaCCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGGTTGGGCTGATTCGCAACGGCGACTGGCTGTAACATATCTCAGAGACCGCGATTCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAg > 6:330030/1‑149 (MQ=255) aaCCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTtcatca < 5:384107/147‑1 (MQ=255) aCCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTtc > 1:418662/1‑142 (MQ=255) aCCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGc < 4:143182/149‑1 (MQ=255) aCCAATTGTCGTTGACCTTCGTCAGCAGAGCTACACCATTGAAGGGCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGc > 6:234938/1‑149 (MQ=255) gTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCt < 6:98833/148‑1 (MQ=255) gTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCAt < 5:234938/149‑1 (MQ=255) gTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCAt > 3:397517/1‑149 (MQ=255) ttGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑Ca < 3:23321/122‑1 (MQ=255) ttGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑Ca > 4:23321/1‑122 (MQ=255) ttGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATg > 7:12020/1‑149 (MQ=255) ttGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATg < 1:296927/149‑1 (MQ=255) gACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAAACCGCGACGCCAGGCGGCATCGCGgtct < 5:10793/112‑3 (MQ=38) gACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAAACCGCGACGCCAGGCGGCATCGCGgtct > 6:10793/1‑110 (MQ=38) tCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCa < 8:380239/145‑1 (MQ=255) cGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTAT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTc < 6:448645/147‑1 (MQ=255) gTCAGCAGAGCTTCACCATTGAAGGGCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCt < 2:304685/148‑1 (MQ=255) gTCAGCAGAGCTTCACCATTGAAGGGCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCt > 5:5784/1‑148 (MQ=255) gTCAGCAGAGCTTCACCATTGAAGGGCTGG‑GGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTtcatca > 3:283160/1‑125 (MQ=255) gTCAGCAGAGCTTCACCATTGAAGGGCTGG‑GGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTtcatca < 4:283160/125‑1 (MQ=255) gcagAGCTTCACCATTGAAGGGCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACtt < 3:84283/149‑1 (MQ=255) cagAGCTTCACCATTGAAGGGCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGgt < 8:324310/98‑1 (MQ=255) cagAGCTTCACCATTGAAGGGCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGgt > 7:324310/1‑98 (MQ=255) gagCTTCACCATTGAAGGGCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCtt > 8:260447/1‑124 (MQ=255) agCTTCACCATTGAAGGGCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATc < 3:63211/149‑1 (MQ=255) cTTCACCATTGAAGGGCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTTTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTc > 4:217091/1‑144 (MQ=255) cTTCACCATTGAAGGGCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTc < 3:217091/144‑1 (MQ=255) cACCATTGAAGGGCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGAt > 6:260526/1‑148 (MQ=255) aCCATTGAAGGGCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATa < 4:397517/148‑1 (MQ=255) ccATTGAAGGGCAGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATa > 6:334405/1‑147 (MQ=255) ttGAAGGGCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCa > 8:444432/1‑149 (MQ=255) gAAGGGCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCAct > 5:166834/1‑149 (MQ=255) gCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGc < 5:20712/149‑1 (MQ=255) gggCGGTGGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCa < 6:342303/122‑1 (MQ=255) gCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCAtct < 7:426753/149‑1 (MQ=255) ttGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGcc > 1:273493/1‑149 (MQ=255) aTTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCAt > 3:314234/1‑149 (MQ=255) cGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGa < 3:292213/148‑1 (MQ=255) gCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGAtt < 2:284867/149‑1 (MQ=255) ggCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTtctc < 7:444432/149‑1 (MQ=255) ggCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTtctc < 8:12020/149‑1 (MQ=255) ggCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTtctc < 7:449145/149‑1 (MQ=255) gcctgatgaagagagatgaaaaacaaACCGCGACGCCAGGCGGCATCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATaaa < 8:202706‑M1/87‑1 (MQ=255) gcctgatgaagagagatgaaaaacaaACCGCGACGCCAGGCGGCATCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATaaa > 7:202706‑M1/27‑113 (MQ=255) gCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTTCTcc < 5:260526/149‑1 (MQ=255) gACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTTCTCCaa < 6:225570/149‑1 (MQ=255) gACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTTCTCCaa < 7:255574/149‑1 (MQ=255) tgatgaagagagatgaaaaacaaACCGCGACGCCAGGCGGCATCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTtct < 4:34163‑M1/121‑1 (MQ=255) tgatgaagagagatgaaaaacaaACCGCGACGCCAGGCGGCATCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTtct > 3:34163‑M1/24‑144 (MQ=255) gCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCt < 2:174919/100‑1 (MQ=255) gCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCt > 1:174919/1‑100 (MQ=255) gCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTTCTCCAatat < 6:5784/147‑1 (MQ=255) cTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCAt > 2:131005/1‑131 (MQ=255) cTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCAt < 1:131005/131‑1 (MQ=255) tGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCtt > 1:163353/1‑61 (MQ=255) tGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCt < 4:63478/75‑1 (MQ=255) tGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCt > 3:63478/1‑75 (MQ=255) tGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATaaa > 8:437812/1‑104 (MQ=255) tGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATaaa < 7:437812/104‑1 (MQ=255) aCATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTTCTCCAAAATAAccgtta > 4:304674/1‑148 (MQ=255) gatgaaaaacaaACCGCGACGCCAGGCGGCATCGCTGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCGTCACTTCATCTGATAAAGCAATCTGGCATCTCGCCTTACACATGATTTTCTCCATTATcaccgttgc < 1:338503‑M1/137‑3 (MQ=255) cATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGa < 6:106862/127‑1 (MQ=255) cATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGa > 5:106862/1‑127 (MQ=255) cATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTTCTCCAATATCAccgttcc < 2:273493/149‑1 (MQ=255) atatCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTTCTCCAATATCAccgttccg > 2:359561/1‑149 (MQ=255) atatCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGCCATTCCTCACTTCAGCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTTCTCCAATATCAccgttccg > 5:120879/1‑149 (MQ=255) ctGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTTCTCCAat > 5:449744/1‑131 (MQ=255) ctGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTTCTCCAat < 6:449744/131‑1 (MQ=255) ctGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTTCTCCAATATCACCGTTCCGTTGCTg > 3:335608/1‑149 (MQ=255) tGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTTCTCCAATATCACCGTTCCGTTg < 8:282045/145‑1 (MQ=255) tGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTTCTCCAATATCACCGTTCCGTTg < 8:275045/145‑1 (MQ=255) tGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTTCTCCAATATCACCGTTCCGTTg > 7:275045/1‑145 (MQ=255) tGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTTCTCCAATATCACCGTTCCGTTg > 7:282045/1‑145 (MQ=255) tGAGACCGCGATGCCGCATGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTTCTCCAATATCACCGTTCCGTTGCTgg > 8:472886/1‑149 (MQ=255) gagaCCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTTCTCCAATATCACCGTTCCGTTGCTgg > 3:271980/1‑148 (MQ=255) agaCCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCCTGATTTTCTCCAATATCACCGTTCCGTTGCTgg < 6:166834/147‑1 (MQ=255) agaCCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTTCTCCAATATCACCGTTGCGTTGCTgg < 6:189852/147‑1 (MQ=255) agaCCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTTCTCCAATATCACCGTTCCGTTGCTgg < 3:139237/147‑1 (MQ=255) agaCCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTTCTCCAATATCACCGTTCCGTTGCTgg < 6:400044/147‑1 (MQ=255) agaCCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTTCTCCAATATCACCGTTCCGTTGCTg < 5:225227/146‑1 (MQ=255) agaCCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTTCTCCAATATCACCGTTCCGTTGCTGGGa < 5:334405/149‑1 (MQ=255) agaCCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTTCTCCAATATCACCGTTCCGTTGCTGGGa > 2:419514/1‑149 (MQ=255) gaCCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTTCTCCAATATCACCGTTCCGTTGCTGGGa > 5:443986/1‑148 (MQ=255) gaCCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTTCTCCAATATCACCGTTCCGTTGCTGGGa < 6:443986/148‑1 (MQ=255) CGCGATGCCGCCTGGCATCGCGGTTTGTTTTTTCATCACTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTTCTCCAATATCACCGTTCCGTTGCTGGGACTg < 2:374223‑M1/149‑1 (MQ=255) CGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTa < 6:76981‑M1/104‑1 (MQ=255) CGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTTCTCCAATATCACCGTTCCGTTGCTGGGACTg < 5:455216‑M1/146‑1 (MQ=255) GATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTTCTCCAATATCACCGTTCCGTTGCTgg < 7:207999‑M1/140‑1 (MQ=255) GATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTTCTCCAATATCACCGTTCCGTTGCTGGGACTGGTc < 8:327180‑M1/148‑1 (MQ=255) ATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTAc > 7:295761‑M1/1‑103 (MQ=255) ATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTAc < 8:295761‑M1/103‑1 (MQ=255) cgccTGGCGTCGCGGTTTGTTTAT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTTGTCCAATATCACCGATCCGTTGCAGGGACTGGGCGATCcg > 2:229721/1‑149 (MQ=255) gccGGGCGGCGCGGGTTGTTTTT‑AATCTCTCTTCAGCATGCTTGTCTGCATGGCATTCCTCACTGCATCACCGAAAGCACCCGCGCATCTCCCCTTACCCCTGATTTTCTCCAAAATCACCGTGACGTTGCTGGGACTGGTCGATAcgg < 6:310096/149‑1 (MQ=255) | TTGCCAGAAAATAGCGAGTTTAAACCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAACATATCTCTGAGACCGCGATGCCGCCTGGCGTCGCGGTTTGTTTTT‑CATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTTCTCCAATATCACCGTTCCGTTGCTGGGACTGGTCGATACGG > NC_000913/4257616‑4257895 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |