New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4542690	60 (0.900)	3 (0.050)	3/266	9.7	4.0%	intergenic (+57/‑425)	fimE/fimA	tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin)
	?	NC_000913	= 4542986	86 (1.380)					intergenic (+353/‑129)	fimE/fimA	tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin)
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GGCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAA  >  NC_000913/4542844‑4543125                                                                                                                                               |                                                                                                                                             ggCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCaaaa                                                                                                                                              <  1:388376/143‑1 (MQ=255)  gcgtgtcGCAGCTCCCTCCTTCTTCGCCCCAAAAACCAGCCGATGCAAGATACACATCTATAAATAAACATCACAATACAATAGTAAGCCAACAAATAAACTGAAAAAGTTGGTCCGCGATGCTTTCCTCTATGAGTCAAAAt                                                                                                                                             <  1:458019/137‑1 (MQ=255)  gCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAAt                                                                                                                                             <  2:897867/143‑1 (MQ=255)   cTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAATCAAAATg                                                                                                                                            >  2:31215/1‑143 (MQ=255)    tCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTTCAAAtac                                                                                                                                           >  1:865507/1‑141 (MQ=255)      gACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGcc                                                                                                                                         <  2:36238/143‑1 (MQ=255)         gCATCTTCCTCATTCTGCTCTCCAAAATCCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCa                                                                                                                                      <  1:187334/143‑1 (MQ=255)              ttCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAGAACGTTGTCCGCGATGCTTTCCTCTATGCGTCAAAATGGCCCCACAtat                                                                                                                                 >  1:1000997/1‑141 (MQ=255)              ttCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTACAAAAATCCCCaaagct                                                                                                                                 >  2:1031033/1‑140 (MQ=255)              ttCCCCATTCCTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGt                                                                                                                                 <  2:908430/143‑1 (MQ=255)                  tCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCCACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCa                                                                                                                             >  1:1193834/1‑143 (MQ=255)                  tCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCa                                                                                                                             >  1:380054/1‑143 (MQ=255)                  tCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAAGATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCa                                                                                                                             <  1:84774/143‑1 (MQ=255)                     ttcttcTCTCCAAAAACCACCTCATGCAATATAAACACCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAAGGGCCCCAAATGTTTCATCt                                                                                                                          <  1:478071/143‑1 (MQ=255)                      tcttctCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCtt                                                                                                                         >  1:987840/1‑143 (MQ=255)                        ttctCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCtttt                                                                                                                       >  1:413554/1‑143 (MQ=255)                        ttctCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCtttt                                                                                                                       >  1:1193868/1‑143 (MQ=255)                         tctctcCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTg                                                                                                                      <  1:504683/143‑1 (MQ=255)                         tctctcCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTg                                                                                                                      >  2:176614/1‑143 (MQ=255)                          ctctcCAAAACCCACCTCATGCAATAGAAACATCTATAAATAAAGACAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTgg                                                                                                                     <  1:33898/143‑1 (MQ=255)                          ctctaCACAAACCAACCCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTTTCCGCAATGCTTTCCTCTATTAGTCAAAATGGCCCCAAATGTTTCATCTTTTgg                                                                                                                     <  1:74880/143‑1 (MQ=255)                            ctcCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTgggg                                                                                                                   >  2:76808/1‑143 (MQ=255)                             tcCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACACTAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAACGTTTCAACTTTTggggg                                                                                                                  >  2:1196327/1‑143 (MQ=255)                             tcCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCACATGTTTCATCTTTTggggg                                                                                                                  >  2:810221/1‑143 (MQ=255)                             tcCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGACCCCAAATGTTTCATCTTCTggggg                                                                                                                  >  2:683413/1‑143 (MQ=255)                             tcCAAAAACCACCTCATGCAATATAAACAGCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTggggg                                                                                                                  >  2:147607/1‑143 (MQ=255)                              ccAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGa                                                                                                                 >  2:175621/1‑143 (MQ=255)                               cAAAGACCACCTCATGCAATATAAACATCTATGAATAAAGATAACAATAGAATATTAAGCCAACGAATAAACTGAAAAAGTTTGTCAGCGATGCTTTCCTCTATGAGTCAAAATAGACCCAAATGTTTCAACTTGTGGGGGag                                                                                                                >  2:273836/1‑142 (MQ=255)                               cAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGTaa                                                                                                                >  1:462173/1‑143 (MQ=255)                               cAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGaa                                                                                                                >  1:674047/1‑143 (MQ=255)                               cAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTAATCTTTTGGGGGaa                                                                                                                >  2:509814/1‑143 (MQ=255)                                 aaaaCCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGaaaa                                                                                                              <  1:387129/143‑1 (MQ=255)                                   aaCCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAAAAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCGAAATGGACCCAAGGGTTTCTCCTTTCGGGGGaaaagt                                                                                                            >  2:289686/1‑141 (MQ=255)                                        ccTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCa                                                                                                       <  1:672753/143‑1 (MQ=255)                                        ccTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCa                                                                                                       <  2:1099301/143‑1 (MQ=255)                                         cTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTAAAAATGGCCCAAAATGTTTCATGTTTTGGGGGAAAACTGTGAAg                                                                                                      >  1:344081/1‑143 (MQ=255)                                             tGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGtt                                                                                                  >  1:526724/1‑143 (MQ=255)                                             tGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGtt                                                                                                  >  1:850390/1‑143 (MQ=255)                                             tGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGtt                                                                                                  >  2:773918/1‑143 (MQ=255)                                             tGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCATCTATGAGTCAAAATGGCCCCAAGTGTTTCATCTGTTGGGGGAAAACTGTGCAGTGtt                                                                                                  >  2:1047939/1‑143 (MQ=255)                                                aaTATAAACATCTATCAATAAATATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGc                                                                                              <  1:1166836/143‑1 (MQ=255)                                                aaTATAAACATCTATAAATAAAGATAACAATAGAGTATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGc                                                                                              >  2:728278/1‑143 (MQ=255)                                                aaTATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGc                                                                                              >  1:11315/1‑143 (MQ=255)                                                    taAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGATTATTGAAACGGCGGTGGGGTATGAGGCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGCAGTc                                                                                          <  1:1195160/143‑1 (MQ=255)                                                     aaaCATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCa                                                                                         >  1:317689/1‑143 (MQ=255)                                                      aaCATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCaa                                                                                        >  1:1083144/1‑143 (MQ=255)                                                          tCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCAAACTc                                                                                    >  1:30130/1‑143 (MQ=255)                                                            tataAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGCGGGAAAACTGTGCAATGTT‑GAAAGGCAAACTCGt                                                                                  >  1:246154/1‑143 (MQ=255)                                                             agaaataaaGATGACAATCGAGTATCAAGTCAAGAAATAAACTGAAAAAGTGTGTCCGCGATGCTTTCCTCTATGAGTCAATATTGCCGCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCAAACTCGtt                                                                                 <  2:1198916/141‑1 (MQ=255)                                                                 ataaaGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCCTCTTTTGGGGGTACACTGTGCAGTGTT‑GACAGTCAAACTCGTTTaca                                                                             >  1:509357/1‑143 (MQ=255)                                                                 ataaaGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTACGCGATGCTTTCCTGTATGAGTCAAAATGGCGCCCAATGTTTCATGTGTGTATGGTGTACTGTGCAGTGTT‑GGCAGTCGAACTCGCTTaaa                                                                             >  2:844646/1‑141 (MQ=255)                                                                  taaaGATAACAATAGAATATTAAGCCAACAAATGCGCTTTTTTAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCAAACTCGTTTacaa                                                                            <  1:321600/143‑1 (MQ=255)                                                                  taaaGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCAAACTCGTTTacaa                                                                            <  1:1138008/143‑1 (MQ=255)                                                                   aaaGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCAGACTCGTTTacaac                                                                           >  1:916445/1‑142 (MQ=255)                                                                   aaaGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCAAACTCGTTTacaaa                                                                           <  1:456906/143‑1 (MQ=255)                                                                       aTAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCAAACTCGTTTacaaaacaa                                                                       <  2:413554/143‑1 (MQ=255)                                                                        tAACAACAGTATATTAAGCCTACAAAGAAGCTAAAAGGGTTGTTCGGTGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTCTTGGAGGAAAACTGTGCAGTGTT‑GGCAGTCAAACTCGTTTacaaaacaaa                                                                      <  2:782349/143‑1 (MQ=255)                                                                        tAAAAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTGCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCAAACTCGTTTacaaaacaaa                                                                      <  1:284436/143‑1 (MQ=255)                                                                              tAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTA‑GGCAGTCAAACTCGTTTAAAACACAAAGTGTAc                                                                >  2:328769/1‑143 (MQ=255)                                                                               aGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCAAACTCGTTTACAAAACAAAGTGTACa                                                               <  1:76808/143‑1 (MQ=255)                                                                                 aaTATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGa                                                             <  2:427251/143‑1 (MQ=255)                                                                                   tatTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAACTGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAAc                                                           <  1:751138/143‑1 (MQ=255)                                                                                    atTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACg                                                          >  1:857085/1‑143 (MQ=255)                                                                                     ttAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGa                                                         <  2:1067831/143‑1 (MQ=255)                                                                                       aaGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTGGGGGGAAAACTGTGCAGTGTT‑GGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACt                                                       >  1:613642/1‑143 (MQ=255)                                                                                         gCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTGTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGc                                                     <  1:90673/143‑1 (MQ=255)                                                                                         gCCAACAAATAAACAGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTAAAAATGGCCCCATATGTTTAAAAAAAAAAAAAAAAACTGTGCAGTGTT‑GGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGc                                                     <  2:512272/143‑1 (MQ=255)                                                                                          ccAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCAAACTCGTTTACAAAACAAGGTGTACAGAACGACTGcc                                                    >  1:111809/1‑143 (MQ=255)                                                                                            aacaaATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCa                                                  >  2:1092870/1‑143 (MQ=255)                                                                                                  tgaaCTGAAAAAGTTTGTCCGCGATGCCTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGa                                            <  2:747742/141‑1 (MQ=255)                                                                                                    attgtaaaaaGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGTCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGAtt                                          <  2:295488/138‑1 (MQ=255)                                                                                                    aaCTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGAtt                                          <  1:176614/143‑1 (MQ=255)                                                                                                    aaCTGAAAAAGTTTGTCCGCGATGCTTTCCACTATGGGTCAAAATGGCCCCAAATGTGTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGact                                          >  2:305744/1‑141 (MQ=255)                                                                                                      cTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGAAGGAAAAATGTCCAGTATT‑GGCAGTCAAACTAGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTa                                        >  1:692638/1‑143 (MQ=255)                                                                                                              gTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGCACGACTGCCCGTGTCGATTTAGAAATAGt                                >  2:569853/1‑143 (MQ=255)                                                                                                               tttGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGtt                               >  1:653290/1‑143 (MQ=255)                                                                                                               tttGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTGTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCAAACTCGTTTACAAAGCGAAGTGTGCAGGACGACTGCCCAGGTCTGTTTAGAAAtgggg                               >  1:21534/1‑139 (MQ=255)                                                                                                                ttGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCGAGTGTTTCATCTTTTGGGACACAATTGTCCTTTGTT‑GGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGttt                              <  1:1134944/143‑1 (MQ=255)                                                                                                                   tCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGtttttt                           >  1:794044/1‑143 (MQ=255)                                                                                                                     cgcgATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTga                         >  1:614321/1‑143 (MQ=255)                                                                                                                       cgATGCTTTCCTCTATGAGTCAAAATGGCCCCACATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCAAACTCGTTTACAAACCAAAGTGTACAGAACGATGGCCCATGTCGTTTTAGAAATAGTTTTTTgaaa                       <  1:282059/143‑1 (MQ=255)                                                                                                                           gCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaaggaa                   <  2:380054/143‑1 (MQ=255)                                                                                                                            cTTGCCTCTATGAGGCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaaggaaa                  <  1:31215/143‑1 (MQ=255)                                                                                                                             tttCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaaggaaag                 >  1:966605/1‑143 (MQ=255)                                                                                                                              ttCCTCTATGAGTCAAAAGGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCCGTGTT‑AGCAGTAAAACCCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAagc                <  1:873402/143‑1 (MQ=255)                                                                                                                               tccttcaTGAGTCAAAATGGCCTCACATGCTTCATCTTTTGCAGCATTTTAGTGC‑GTGTTATCCAGTCCTACGCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAagca               <  2:1166435/137‑1 (MQ=255)                                                                                                                               tCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAagca               >  1:211068/1‑143 (MQ=255)                                                                                                                                    tATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGACAACTGTGCATTGTT‑GGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATg          >  1:507144/1‑143 (MQ=255)                                                                                                                                       gggTCAAAATGGCCCCCAATGTTTTATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGaaa       <  2:165115/141‑1 (MQ=255)                                                                                                                                        aGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGGTTTAGAAATAGTTTTTTGAAAGGAACGCAGCATGaaaa      >  1:393284/1‑143 (MQ=255)                                                                                                                                          tCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGCAAGCAGCATGAAAAtt    >  1:358088/1‑143 (MQ=255)                                                                                                                                            aaaaTGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTaa  >  1:5501/1‑143 (MQ=255)                                                                                                                                            aaaaTGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTGTTTGAAAGGAAAGCAGCATGAAAATTaa  >  2:1121709/1‑143 (MQ=255)                                                                                                                                               |                                                                                                                                             GGCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTT‑GGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAA  >  NC_000913/4542844‑4543125

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.