Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,765,493 T→G 20.9% S1104R (AGT→AGG)  rhsA → Rhs protein with putative toxin 55 domain, putative polysaccharide synthesis/export protein, putative neighboring cell growth inhibitor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,765,4930TG20.9% 119.2 / 5.8 110S1104R (AGT→AGG) rhsARhs protein with putative toxin 55 domain, putative polysaccharide synthesis/export protein, putative neighboring cell growth inhibitor
Reads supporting (aligned to +/- strand):  ref base T (53/28);  new base G (21/7);  total (75/35)
Fisher's exact test for biased strand distribution p-value = 4.82e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 110 total aligned reads displayed.

CTGGTACGGCTGGGACGGCGACC‑GGCTGACCACAATACAGAACGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCCCTTATCAGCA‑AGGAAGGGACAAC‑AGAATGGTGCGC‑AGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGA  >  NC_000913/3765256‑3765722
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                            
cggggacgcgcgggacgg‑gacCGGGCAGACCCAAATAAAGAACGCAAACACCCGCCTCCGGAGTATGTACCGGCGGGGGAGCTTCCAGCCACCACACAGGGGTAAACCCGCCCCCGGTGAGCTGGCGAAAACGCAGCG‑CGGCGGCCGGGCGGAGGGGCTT‑CAGCAGTCG‑GGCGGCGAAGACGGTGGCGGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTg                                                                                                                                                                                                                                             <  1:288180/228‑1 (MQ=2)
        ggggggggccgccgtggggacaCCACAAGACAAGACAACAGAACCAGCAGCCAGAAGACTTAAGAGCGGGGGAGCATCGCGCCCCTCAACAGATTGGAACCGGCCACGGGTGAGCGGGCGAAAACCCAGCG‑CCCCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCt                                                                                                                                                                                                                                      <  1:1073576/218‑1 (MQ=11)
        gCTGGGACGGCGACC‑GGCTGACCACAATACAGAACGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGTGTGGGGTTCCCGCCGGGCCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GGGAAATCCTg                                                                                                                                                                                                                                     >  2:760796/1‑239 (MQ=255)
         cTGGGACGGCGACC‑GGCTGACCACAATACAGAACGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCCGAGTTGAAACCGCCACCGGTGAGCTGGCGCAAACCCAGCG‑CCGCAGCCTGGCGGATGCCCTT‑CGCCAGTCC‑GGCGGCGAAGACGGGGGCAGGGGGGGGTTCCCCCCGGGGCCGGGGCGAAGGTCCGACC‑GGCCGGGAA‑GGGacaccccgg                                                                                                                                                                                                                                    >  1:242838/1‑231 (MQ=11)
            ggACGGCGACC‑GGCTGACCACAATACAGAACGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGTGTGGCGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑g                                                                                                                                                                                                                                >  2:464273/1‑239 (MQ=37)
             gACGGCGACC‑GGCTGACCACAATACAGAACGACAGAACCCGCATCCAGACGATTTATCCGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGGGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTAC‑GGCGGCGAAGACGGCGGCAGAGTGGCGTTCCCGCCGGGGCCGGTGCAGATGGTCGACC‑GGGTGGAAA‑GGGAACTCCCGGcgg                                                                                                                                                                                                                                 >  1:808274/1‑236 (MQ=11)
             gACGGCGACC‑GGCTGACCACAATACAGAACGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGCGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCC‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGGGTGGGGTTCCCGCCGGTGCTGGTGCAGATGCTCGCCC‑GGCCGGAAA‑GGGAAAACCTGGCT‑g                                                                                                                                                                                                                                >  2:102497/1‑238 (MQ=11)
             gACGGCGACC‑GGCTGACCACAATACAGAACGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTGGACC‑GGCTGGGAA‑GGGAAATCCTGGcgg                                                                                                                                                                                                                                 >  2:937859/1‑236 (MQ=255)
             gACGGCGACC‑GGCTGACCACAATACAGAACGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGGGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GGGAAATCCTGGCT‑g                                                                                                                                                                                                                                >  2:1179115/1‑238 (MQ=37)
              aCGGCGACC‑GGCTGACCACAATACAGAACGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGGGGCAGGGGGGGGTTCCCGCCGGGGGTGGTGCAGGTAGTCGCCC‑GGCTGGGAA‑GTGgaaaaccggcggga                                                                                                                                                                                                                               >  1:391630/1‑228 (MQ=11)
              aCGGCGACC‑GGCTGACCACAATACAGAACGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGGGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGGAGACGGAGGCAGTGTGGTGGTCCCGCCGGGGCAGGGGCGGAAGACCGACG‑GGCGGGGAA‑GGGaaaacagggtggaa                                                                                                                                                                                                                               >  1:461907/1‑228 (MQ=11)
                ggCGACC‑GGCTGACCACAATACAGAACGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAAACGGTGGCAGTGTGGTGTTCCCGCCGGTGCGGGTGCAGATGCCCGACC‑GGCGGGAAA‑GGGAATACCTGGCT‑GACCg                                                                                                                                                                                                                            >  2:1307367/1‑239 (MQ=255)
                                       aGAACGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGTGTGGGGTTCCCGCCGGGGCTGGTGCAGATGCCCGACC‑GGCTGGGAA‑GGGAAATCCTGGCT‑GACCGGGGGAAG‑GAGGA‑AAGccgccgg                                                                                                                                                                                                    >  1:151393/1‑238 (MQ=11)
                                         aaCGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGCGT‑GAGGA‑AAGCAGCCgctg                                                                                                                                                                                                  >  2:1030886/1‑239 (MQ=18)
                                         aaCGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTCGCT‑GACCGGGTGCGG‑GAGGA‑AAGCCGCCgctg                                                                                                                                                                                                  >  2:729689/1‑239 (MQ=18)
                                         aaCGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGAG‑CCGCAGCCTGGCGGATGCGCTT‑CATCAGTCC‑GGCGGCGCATACGGTGGGCGTGTGGGGTTCCCGCCGGTGCCGGGGGAGTTTCTCCGCC‑GGCTGGGAA‑GAGCAAACCCGTCT‑GCCCGGGGGGGG‑GAGGa‑aaagcggcgcgg                                                                                                                                                                                                  >  1:1229503/1‑229 (MQ=11)
                                         aaCGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAACG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGGGGGGGGTTCCCCCCGGTGCGGGTGCAAATTGCCGACC‑GGCCGGAAA‑GGGAAATCCGTGCC‑GA‑CGGGGGGGT‑GAGGACAAcccgccccgc                                                                                                                                                                                                  >  1:885565/1‑235 (MQ=11)
                                           cGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAACG‑CCGCAGCCTGGCGGGTGCGCTT‑CAGCAGTCC‑GGCGGCGAAGCCGGCCGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCCGATGCTCGACC‑GCCTGGGAA‑GTGCGAACCTGGCG‑CCCCGGGGGAAG‑GAGTA‑AAGCCGCCgcaggc                                                                                                                                                                                                >  1:240982/1‑239 (MQ=11)
                                            gACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGAGGCAGTGTGGTGTTCCCGCCGAGGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCagccgccg                                                                                                                                                                                                  >  2:1293042/1‑234 (MQ=16)
                                              cAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGGGAGT‑GAGGA‑AACCCGCCgctggccg                                                                                                                                                                                              >  2:1293887/1‑236 (MQ=18)
                                              cAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGGGGCAGGGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAC‑GTGAAATCCTGCCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCgctggctg                                                                                                                                                                                              >  2:1290422/1‑238 (MQ=16)
                                                   cccGCATCCCGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGGGTGGGGTTCCCGCCGGTGCTGGTGCCGATGACCGACC‑GGCTGGAAA‑GGGAAATGCTGGTA‑GACCGGGGGGGT‑GGGGA‑AAGCcggcgcggccggggcacg                                                                                                                                                                                        >  1:648090/1‑227 (MQ=11)
                                                      gCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGGGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGc                                                                                                                                                                                     >  2:1156249/1‑239 (MQ=18)
                                                       cATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGGGAGT‑TGGGA‑AAGCCGCCGcgggcgggacccgggcg                                                                                                                                                                                    >  2:1112668/1‑230 (MQ=11)
                                                             gACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCGGGCATCGTGCGGCCTg                                                                                                                                                                               >  2:33557/1‑238 (MQ=18)
                                                              aCGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGTGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGGGAGT‑GAGGA‑AAGCCGCCGCGGGCGGGCATCGTGCGGCCTGa                                                                                                                                                                              >  2:1074800/1‑238 (MQ=16)
                                                              aCGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGTGTGGGGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GGGAAATCCTGGCT‑GACCGGGGGCTG‑GAGGA‑AAGCCGCCGCTGGCGGGCATCCTGCGGCCtta                                                                                                                                                                              >  2:1068072/1‑236 (MQ=11)
                                                                  tttATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCCCTGGCCGGCATCGTGCGGCCTGACCGTg                                                                                                                                                                         >  2:1000097/1‑239 (MQ=25)
                                                                          ccGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GGGAAATCCTGGCT‑GACCGGGGGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGGGCAGa                                                                                                                                                                  >  2:943514/1‑238 (MQ=25)
                                                                            ggggAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGGGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGG‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGGGCAGATGc                                                                                                                                                               >  2:1029273/1‑239 (MQ=25)
                                                                             gggAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GGGAAATCCTGGCT‑GCCCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCAACGGGCGGCCTGACCGTGCAGCAGATGCa                                                                                                                                                              >  2:416178/1‑239 (MQ=255)
                                                                                ggCTTCCCGCCACTAATGAGGGTTGAACCCGCCCCCGGGGGGCGGGCGAAACCGCGGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGCCC‑GGCGGCGAAGACGGTGGCAGTGGGGTGTCCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCaaa                                                                                                                                                            <  2:1285193/237‑1 (MQ=11)
                                                                                    tCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAg                                                                                                                                                       >  2:209863/1‑239 (MQ=35)
                                                                                    tCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGGGTGGGGTTCCCGCCGGTGCTGGCGCAGATGCTCGACC‑GGCGGGGAA‑GGGAAAACCTGGCG‑GACCGGGGGAGT‑GGGGA‑AAGCCGCCGCTGGCTGGCACCGGGCGGCCTGACCCGGGGGGAGACGACAAACCAg                                                                                                                                                       >  1:630761/1‑239 (MQ=11)
                                                                                        gCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGTGTGGGGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GGGAAATCCTGGCTGGACGGGGGGTGG‑GGGGA‑AA‑CCGCCCCCGGGCGGCATGGGGCGGGCGGAGCGGGGAGCCGGAGCAAAACCaaaggg                                                                                                                                                   >  1:1264059/1‑234 (MQ=11)
                                                                                          cccTCAGCAGAGTTGAACCCCCCCCCGGTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGCCC‑GGCGGCGAAGACGGTGGCAGTGTGGTGTCCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGAc                                                                                                                                                 <  2:703710/237‑1 (MQ=255)
                                                                                          cACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGGGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGGGAGG‑GAGGA‑AAGCCGCCGCGGCCTGGCACGCTGCGGCCTGCCCGGGGGGGAGGAGCAAAACCaaaggggc                                                                                                                                                 >  1:762082/1‑232 (MQ=11)
                                                                                            cTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGAccc                                                                                                                                               >  2:1314246/1‑239 (MQ=35)
                                                                                               atcaGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGGGGAGCAGAGGCAAAACCAGATGGACCCggg                                                                                                                                            >  2:86673/1‑238 (MQ=25)
                                                                                               atcaGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GGGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCCGGCGGGGACCCGGGCGCCTGACCCGGGGGCCGAGGCAAAACCAGATGGACCCggg                                                                                                                                            >  1:21632/1‑238 (MQ=11)
                                                                                               atcaGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCCGGTGCCGATGCTCGACC‑GGCTGGAAA‑GTGAACTCCTGGCT‑GACCGGGGGGGG‑GAGGA‑AAGGCGCCGCGGGCGGGCCTCGGGCGGCCCGCCCCGGGGGCCGCTGCCAAACCAGAAGGGccccgg                                                                                                                                            >  1:1023297/1‑236 (MQ=11)
                                                                                               atcaGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGGGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GGGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGGGGAGCAGATGCAAAACAAAATGGACCCggg                                                                                                                                            >  2:268152/1‑238 (MQ=255)
                                                                                                      ttGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGGGGacac                                                                                                                                      >  2:40530/1‑238 (MQ=18)
                                                                                                      ttGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCATGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGGGCGGCCTGAACGTGGAGCAGATGCAAAACCAGAGGGGCCCGGGGTacac                                                                                                                                      >  2:1278191/1‑238 (MQ=255)
                                                                                                         aaaCCGCCACCGGTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCCAAACCAGATGGACCCGGGGGCCACGCCg                                                                                                                                  >  2:507131/1‑239 (MQ=12)
                                                                                                         aaaCCGCCACCGGTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGGGAACACCCCg                                                                                                                                  >  2:256993/1‑239 (MQ=17)
                                                                                                              gCCACCGGTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGGGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGcgcg                                                                                                                             >  2:1214000/1‑239 (MQ=14)
                                                                                                                    cgggggggggCGGAAACGCGGCGCCCGCGGCTGGGCGGGTGCG‑TT‑GAGGAGGCCGGGGGGCGAGGAGGGGGGGTGTGGGTTGTCCCCGCGGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGaaaaa                                                                                                                        <  1:1156249/231‑1 (MQ=11)
                                                                                                                     gTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGGGTACACGCCGGCGCGAAAAAt                                                                                                                       >  2:216082/1‑238 (MQ=14)
                                                                                                                          gcggggaaaacggcgggccggaaGCCGGGCGG‑TGCGCTTCCAGCGGGCC‑GGCGGCAAAGGCGGTGGCGGTGTGGTGTCCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCAc                                                                                                                   <  2:21632/216‑1 (MQ=11)
                                                                                                                          cTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCCCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGG‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCCAAACCAACGGGCCCCGGGGAACACGCCGGCGCGAAAAACCCa                                                                                                                    >  1:1116534/1‑236 (MQ=11)
                                                                                                                             gCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGTGGGGGGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTTGGGCCCGACCGGGGGGCGGAGGCCAAACCAGGTGGCCCCGGTGTAACCCCCGGGGGCAAAAACCCAccctg                                                                                                               >  1:1251900/1‑235 (MQ=11)
                                                                                                                                       aGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GGGAAATCCCGGCT‑GACCGGGGGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCAACGCGGGGCCTGACGGTGGAGCAGGTGCCAAACCAAAAGGACCCGGGGGCACCGCCGGGCCGAAAAAACCACCCGCACCaacggcaa                                                                                                    >  1:1305734/1‑232 (MQ=11)
                                                                                                                                               cAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGCCC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGGGGAT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGGGCGGCCTGACCGAGGGGCCGATGCAAAACCAGATGGACCAGGGGTAAACGCCCGGGCGGAAAATACCCCTGTAcaccctggaccccgcc                                                                                              >  1:268275/1‑223 (MQ=11)
                                                                                                                                                   cTGGGGGACGCGCTC‑CAGCAGTCC‑GGCGGCAAAGGCGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGcc                                                                                          <  2:1169496/238‑1 (MQ=9)
                                                                                                                                                            gcgcTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTgg                                                                                >  2:880511/1‑238 (MQ=31)
                                                                                                                                                                         tCC‑GGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCACAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCGCGGCGGCCATCGCGGCCA‑GCCGCTGGGCCTTATCAGCac                                                                   >  2:469091/1‑238 (MQ=255)
                                                                                                                                                                           c‑ggcggCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATTGACCCGGGGTACACGCCGGCGCGAACAATCCACCTGTACCACTACGACCATCGCGGCCT‑CCCGCTGGCCCTTATCACCa‑agc                                                                >  2:102686/1‑238 (MQ=255)
                                                                                                                                                                           c‑ggcggCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGCCCATCCCGGCCT‑GCCGCTGGCCCtccccagcccgg                                                                 >  2:1153988/1‑228 (MQ=2)
                                                                                                                                                                             ggggggaagagggggggcggttgggtgTCCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCCCTTATCAGCa‑agga                                                               <  2:274677/216‑1 (MQ=11)
                                                                                                                                                                              ggggggaggtggggggCAGTGTGGTGTCCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCCCTTATCAGCa‑agga                                                               <  2:391630/224‑1 (MQ=255)
                                                                                                                                                                              gggggagaGACGGTGGAGGTGTGTTGTCCCCGCGGGTGCGGGTGCAGATGCTCGACC‑GGCTGTAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCCCTTATCAGCa‑agga                                                               <  2:596995/231‑1 (MQ=11)
                                                                                                                                                                              ggggagAAGGCGGTGGGAGGGTGGTTTCCCCGCCGGTGCTGGTGCAGATGCCCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCCCTTATCAGCa‑agga                                                               <  2:242838/233‑1 (MQ=255)
                                                                                                                                                                              gcggcgAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCCCTTATCAGCa‑aggaa                                                              >  2:442940/1‑239 (MQ=33)
                                                                                                                                                                              gcggcgAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCCCTTATCAGCa‑aggaa                                                              >  2:35011/1‑239 (MQ=33)
                                                                                                                                                                              gcggagAAGAGGGTGGTGGTGGGGGGTCCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCCCTTATCAGCa‑agga                                                               <  2:288011/238‑1 (MQ=255)
                                                                                                                                                                                 gggagggggtggggggtggGGTTTCCCCGCGGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCCCTTATCAGCa‑aggaagg                                                            <  2:493851/223‑1 (MQ=11)
                                                                                                                                                                                  gagaggggtggtggttgtgGTGTTCCCGCCGGTGTTGGGTCGGGTGCACACCG‑GGGTGGAAA‑GTGAAATGCGTGCG‑GAGGGGGTGGGG‑TGGGA‑AAGCCGCCGCTGGCTGGCCGGGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACCCGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCCCTTATCAGCA‑AGGAAGGGa                                                          <  1:355373/224‑1 (MQ=11)
                                                                                                                                                                                   gAAGACGGGGGCGGTGGGGTGTCCCCGCGGGGGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GGGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCCCTTATCAGCA‑AGGAAGGGa                                                          <  2:630761/238‑1 (MQ=255)
                                                                                                                                                                                                 tgtgGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GGGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCACCGTGCGGCCTGACCGGGGAGCCGATGCAAAACCGGCTGGACCTGGCGTACCGGCCGACCCGAAAAATCCCCCTGCCCCCATGCGGCC‑TCCCGGGCTCGCCCCTGGACCCTATCACCA‑AGGAAGGGAAAAC‑AGAATgggggg                                          >  1:320145/1‑235 (MQ=11)
                                                                                                                                                                                                 gggggtgTTCCCGCCGGTGGTGGGGCAGATGCTCGACC‑GTCTGAAAA‑TTGAAATCCTGGCT‑GCCCGGGTGAGG‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCCCTTATCAGCA‑AGGAAGGGACAAC‑AGAATGGTgcg                                          <  2:1304019/236‑1 (MQ=11)
                                                                                                                                                                                                  tgggttctCCCGCGGGTTGTGGTGCAGTTGCTCGACC‑GGGTGGAAA‑GTGAAATCCGGGCT‑GCCGGGGGGGGT‑GAGGA‑AAGCCGCCGCTGGGTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCCCTTATCAGCA‑AGGAAGGGACAAC‑AGAATGGTgcg                                          <  1:598217/231‑1 (MQ=11)
                                                                                                                                                                                                  gttttttccccggtggttgtGGGGCAGATTCTCGCGC‑GGGTGGAAA‑GTGAAATCCGGGCG‑GACGGGGGGAGG‑AGGGA‑AAGCCGCCGCTGGCTGGCCTCGGGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCCCCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCCCTTATCAGCA‑AGGAAGGGACAAC‑AGAATGGTgcgc                                         <  1:74595/220‑1 (MQ=11)
                                                                                                                                                                                                  gtgtttttCCCGCCGGTGCTGGTGCAGATGCCCGACC‑GGCTGAAAA‑GGGAAATCCGGGCT‑GACCGGGTGAGG‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCCCTTATCAGCA‑AGGAAGGGACAAC‑AGAATGGTgcg                                          <  2:648090/232‑1 (MQ=255)
                                                                                                                                                                                                  gtgttgTCCCCGCCGGTGCGGGTGCGGATGCTCGACC‑GGCTGGAAA‑GTGAAATCATGGTG‑AACCGGGTGATT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCCCTTATCAGCA‑AGGAAGGGACAAC‑AGAATGGTgcg                                          <  2:448186/238‑1 (MQ=11)
                                                                                                                                                                                                  gtggttTTCCCGCCGGTGCGGGGGCAGATGCCCGACC‑GGCTGGAAA‑GGGAAACCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCCCTTATCAGCA‑AGGAAGGGACAAC‑AGAATGGTgcg                                          <  2:268275/238‑1 (MQ=255)
                                                                                                                                                                                                  gtggtgTCCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCCCTTATCAGCA‑AGGAAGGGACAAC‑AGAATGGTgcg                                          <  2:151393/238‑1 (MQ=37)
                                                                                                                                                                                                  ggggtgTCCCCGCCGGTGCTGGTGCCGATGCCCGACC‑GGCTGGAAA‑GTGAAACCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AGGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCCCTTATCAGCA‑AGGAAGGGACAAC‑AGAATGGTgcg                                          <  2:1023297/236‑1 (MQ=255)
                                                                                                                                                                                                   gtgtttccccGCCGGTGCTGGTCCAGATGCGCGGCC‑GGGTGGAAA‑GTGAAATCCGGGCT‑GACCGGGTAGGG‑GAAGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCCCTTATCAGCA‑AGGAAGGGACAAC‑AGAATGGTgcgc                                         <  2:753527/231‑1 (MQ=11)
                                                                                                                                                                                                   ggtggtccccGCCGGTGTGGGGGCAGATGCCCGACC‑GGCTGGAAA‑GTGAAATCCGGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCCCTTATCAGCA‑AGGAAGGGACAAC‑AGAATGGTgcgc                                         <  2:808274/231‑1 (MQ=255)
                                                                                                                                                                                                     tttccccccccGGTGCTGGTGAAGATG‑TCGCCCGGGCGGGAAA‑GGGAAATCCGGGCG‑GGCCGGGTGGGG‑GAGGA‑AGGCCGGCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGAAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCCCCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCCCTTATCAGCA‑AGGAAGGGACAAC‑AGAATGGTGCGC‑AGa                                     <  1:937859/234‑1 (MQ=11)
                                                                                                                                                                                                        ttCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCCCTTATCAGCA‑AGGAAGGGACAAC‑AGAATGGGGCGC‑AGaaaa                                  >  2:598217/1‑237 (MQ=37)
                                                                                                                                                                                                             gccgGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACACCTGCGACCATCGCGGCCT‑GCCGCTGGCCCTTATCAGCA‑AGGAAGGGACAAC‑AGAATGGTGCGC‑GGAAAACGagg                             >  2:1086804/1‑237 (MQ=255)
                                                                                                                                                                                                             gccgGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGGGCGGCCTGACGGTGGCACAACTGCAAAGCCAGATGGACCCGGTATACACCCCGGCGCGAAAAATTCACCTGTACCACTGCGCACATCGCGGCCC‑GCCGCTGGCCCCTATCAACACAGCAACGCacaac‑acgcgggacgcaaaaaaccac                                >  1:913419/1‑218 (MQ=11)
                                                                                                                                                                                                              ccgGGGCGGGGGCAGATGCTCGCCC‑GGCTGAAAA‑TGGAATTCCTGGCG‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCCCTTATCAGCA‑AGGAAGGGACAAC‑AGAATGGTGCGC‑AGAATACGATGa                            <  2:461907/239‑1 (MQ=11)
                                                                                                                                                                                                                cgcttgtgtggtggtcccggccc‑GGTTTGAAA‑GTCAAATCCTGGCT‑GACC‑GGTGGGTAGAAGA‑AACCCCACGCTGGCTGGCATCGTGCGGCCTGGCCGTGGGACAGATGCAAAACCAGTTGGCCCCGGGGTACCCGCCGGCGCGAAAAATCCACCTGTCCCCCTTCGCCCATCGCGGCCT‑GCCGCTGGCCCTTATCAGCA‑AGGAAGGGACAAC‑AGAATGGTGCGC‑AGAATACGATGAAt                          <  1:699961/218‑1 (MQ=11)
                                                                                                                                                                                                                  tGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCCGATGCAAAACCAGCTGGACCCGGCGTACACGCCGGCGCGAAAAATCCACCCGTACCACTGCGACCATCACGGCCT‑GCCGCCGGCCCTTATCACCA‑ACGAAGAGACAAC‑AGAATggggacgagaaaagcaagaaacg                         >  1:826960/1‑218 (MQ=11)
                                                                                                                                                                                                                  tGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGGACACGCCCGCGCGAAACATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCCGGCCCTTCTCCGCA‑CGGAAGGGACAAC‑AAACAGGGGCGC‑AGAACAAGAGGAATgg                        >  1:970199/1‑239 (MQ=11)
                                                                                                                                                                                                                   gcgggTGCAGAGGCCCGACC‑GGCGGGAAA‑GTGAAATCCTGGCT‑GCCCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCCCTTATCAGCA‑AGGAAGGGACAAC‑AGAATGGTGCGC‑AGAATACGATGAATggg                       <  2:1305734/236‑1 (MQ=255)
                                                                                                                                                                                                                    cTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGGGTACCAGCCGGCGCGAAAAATCCAACTGTACCACGGCCACCACCGCGGCCT‑GCCCCTGGCCCTTAACAGCA‑CGGAAGGGACAAC‑AGAAAgggggcaagaaaacgagaaaggggg                       >  1:119247/1‑216 (MQ=11)
                                                                                                                                                                                                                          ggaggtgcccgcc‑GGGTGGAGAGGTGACAGCCGGGCT‑GGCCGGGGGAGG‑AGGGA‑AAGCCGCCGCTGGCTAGCATCGGGGGGCCGGGCCGTGGAGCAGAGGCAAAGCCAGATGGTCCTGGTGGACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCCCTTATCAGCA‑AGGAAGGGACAAC‑AGAATGGTGCGC‑AGAATACGATGAATGGGGCAAc                  <  1:272683/227‑1 (MQ=11)
                                                                                                                                                                                                                            gATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGCCCCGGGGTACACGCCGGCGCGAAAAATCCACCTGTACCACCGCGACCATCCCGGCCT‑GCCGCTGGCCCTTATCAGCA‑AGGCAGGG‑CAACAAAAATGGTGGCC‑CGAAAACGATGAAAGGGGCAAcaggc              >  1:561874/1‑235 (MQ=11)
                                                                                                                                                                                                                            gATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCCCTTTTCAGCA‑AGGAAGGGACACA‑CGAATGGTGCGC‑AGAAGACGTTGAATGGGGCAACctgc              >  2:287643/1‑239 (MQ=255)
                                                                                                                                                                                                                            gATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGAACCACTGCGACCATCGCGGCCT‑GCCGCTGGCCCTTATCAGCA‑AGGAGGGGCCACC‑AGAATGGTGGGC‑AGAATACGATGAATGGGGCACCctcc              >  2:472912/1‑237 (MQ=255)
                                                                                                                                                                                                                                 tCGCCC‑GGCGGGAAG‑GGGAAATCGTGGCT‑GACGGGGTGAGT‑GGAGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCCCTTATCAGCA‑AGGAAGGGACAAC‑AGAATGGTGCGC‑AGAATACGATGAATGGGGCAACCTGCtgaa          <  2:351509/238‑1 (MQ=11)
                                                                                                                                                                                                                                 tCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGCAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCCCTTATCAGCA‑AGGAAGGGACAAC‑AGAATGGTGCGC‑AGAATACGATGAATGGGGCAACCTGCtgaat         >  2:272683/1‑239 (MQ=37)
                                                                                                                                                                                                                                  cGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCCCTTATCAGCA‑AGGAAGGGACAAC‑AGAATGGTGCGC‑AGAATACGATGAATGGGGCAACCTGCtgaatg        >  2:208003/1‑239 (MQ=37)
                                                                                                                                                                                                                                  cGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGGGGAGCAGAGGCAAAACCACATGGGACCGGGGTACACGCCGCGGCGAAAAATCAACCTGACCAACGTCACCCGTCCAGGCCC‑ACCGCGGGCCCTTTCCAACA‑AGGAAGGGGCAAC‑AG‑ACGGTGGACAAGAAAACGATTGATCGGGCAACACGCcgaatg        >  1:82206/1‑239 (MQ=2)
                                                                                                                                                                                                                                     cc‑GGCGGGAAA‑GGAAAATCCGGGCT‑GACGGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGGGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCCCTTATCAGCA‑AGGAAGGGACAAC‑AGAATGGTGCGC‑AGAATACGATGAATGGGGCAACCTGCtgaatgaa      <  2:523909/238‑1 (MQ=255)
                                                                                                                                                                                                                                         gCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCCCTTATCAGCA‑AGGAAGGGACAAC‑AGAATGGGGCGC‑AGAATACGATGAATGGGGCAACCTGCTGAATGAAgaga  >  2:1208030/1‑239 (MQ=37)
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                            
CTGGTACGGCTGGGACGGCGACC‑GGCTGACCACAATACAGAACGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCG‑CCGCAGCCTGGCGGATGCGCTT‑CAGCAGTCC‑GGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACC‑GGCTGGAAA‑GTGAAATCCTGGCT‑GACCGGGTGAGT‑GAGGA‑AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCCCTTATCAGCA‑AGGAAGGGACAAC‑AGAATGGTGCGC‑AGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGA  >  NC_000913/3765256‑3765722

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑