| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,184,542 | C→A | 100% | P1100Q (CCG→CAG) | rpoB → | RNA polymerase, beta subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,184,542 | 0 | C | A | 100.0% | 504.2 / ‑6.7 | 148 | P1100Q (CCG→CAG) | rpoB | RNA polymerase, beta subunit |
| Reads supporting (aligned to +/- strand): ref base C (0/2); new base A (80/65); total (80/68) | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 148 total aligned reads displayed.
GAAACACGAGTTCGAGAAGAAACTCGAAGCGAAACGCCGCAAAATCACCCAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCTGGCTGAAAACCTGCGCAAA > NC_000913/4184306‑4184777 | acacGAGTTCGAGAAGAAACTCGAAGCGAAACGCCGCAAAATCACCCAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTgg > 2:715397/1‑239 (MQ=255) gAGTTCGAGAAGAAACTCGAAGCGAAACGCCGCAAAATCACCCAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGt < 2:1281681/239‑1 (MQ=255) ggtgctagaaaaAACTCGAGGCGAAACGCCGGCAAATGCACGAGGGTGGAGATCTGGCACCGTGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTa < 1:473056/233‑1 (MQ=255) cgggaagaaACCTGAAGCGAAAAGTCGGAAAATCCCCCAGGGCGACGATCCGGCACCGGGCGTGCTGAAGATTGGTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTGCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGt < 1:73070/236‑1 (MQ=255) cGAGAAGAAACTCGAAGCGAAACGCCGCAAAATCCCCCAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGt < 2:1313167/239‑1 (MQ=255) gaaACTCGAAGCGAAACGCCGCAAAATCACCCAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACAAGCTGGGCGTACCGTCTCGTa > 2:1188383/1‑239 (MQ=255) aCTCGAAGCGAAACGCCGCAAAATCACCCAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGACGTCACGGTAACAAGGGGGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGACGTACCGTCTCGTATGa > 2:90987/1‑239 (MQ=255) cTCGAGGGGAAACGGCGCAAAGTCGCCCAGGGCGGCGTGCTGGCCCCGGGCGTCGTGAAGATTGTTAAGGTATGTCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACACGATGGCAGGTCGGCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGaa < 1:773512/239‑1 (MQ=255) ccaagggaaagcacggaaaaTCCCCCAGGGGCACGGTCGGGCACCGGGCCTGCTTAAGATTGTTAAGGTATATCTGGCGGGTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACa < 1:1221451/223‑1 (MQ=255) gAAGCAAAACGGCGAAAAATCACCCAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATAGCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACAt < 2:1260903/239‑1 (MQ=255) aaTCACCCAGGGCAACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGaaa < 2:681375/239‑1 (MQ=255) cccccaggggcgaggtttgggcccGGGGGGGCTGGAGATTGGTAAGGTATATCGGACGGTTAAACGCCGTATCCAGCCTGGGGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAAccc < 1:114647/217‑1 (MQ=255) cccAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCa > 2:391985/1‑238 (MQ=255) cccAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCAc < 2:29512/239‑1 (MQ=255) cccAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCAc < 1:154452/239‑1 (MQ=255) cccAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCAc < 2:32735/239‑1 (MQ=255) cccAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACAAGCTGGGCTGACCGTTTCGTATGAAAATCGGTCAG‑ATCTTCGAAACCCa > 2:960569/1‑238 (MQ=255) cccAGGGCCACGATCTGGCACCGGGCGGGCTTAAGATTGTTAAGGTAGAGCTGGCGGTTAAACGCCGTAACCAGACTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCAc < 2:327339/239‑1 (MQ=255) aaGGGCGACGATCTGGCACAGGGCGGGGTGAAGATTGTTAAGGGTTATCTGGCGGTTAAACGGCGTATCCAGCCCGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACGGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCCCCt < 2:818039/238‑1 (MQ=255) cgaTCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGGATg > 2:448100/1‑238 (MQ=255) cgaTCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGGATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATg > 2:77803/1‑238 (MQ=255) tGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGCCACGGTAACAAGGGTGTAATTTCTAAGATCCACCCGATCGGAGATATGCCTTACGATGAAAACGGTAGCCCGGAAAGCATCGAACCGAACAACACGGGCGTACCGTCTCGGATGAACATCGG‑CAGAATACACAAAACCCACCCGGGTAGGGcggga > 1:699090/1‑235 (MQ=255) ggCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGGAt > 2:256915/1‑239 (MQ=255) ggCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCAACCTGGGTATGGCTGCGAAAGGTa > 2:1025107/1‑238 (MQ=255) ttaaGATTGTTAAGGTAAATCGGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGAc < 2:1142635/237‑1 (MQ=255) taaaGATTTGTAAGGTTTATGTGGCGGTTAAACGCCGTGGCCCGCTTGGTGTAAAGGTGGCAGGTCCTTCGTGTAACAAGGGTGTAATTTCTAAGAGCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACTAGCTGGGCGTATCGTCTCGTATGAACATCGGTCAG‑ATCCTCGCAACCCGCCTGGGTATGGCTGCGAAAGGTAGCGGCGAc < 1:168159/237‑1 (MQ=255) tGAAGGTTTGTAGGGTATATCTGGCGGGTAAAAGCCGGTTCCAGCCTGGTGACAAGGTGGCAGGTCGTGACGGTAACGAGGGTGTAATTTCTAAGATAAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGAc < 1:1136184/239‑1 (MQ=255) tatCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGGATCGGCGCAAAGATCAACGCCATg > 2:1327039/1‑237 (MQ=255) tatCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGAGGTAAACGGTACGCCGGTAGACATCGGACTGAACCAGCTGGCGGGACCGTCTCGGTTGGACTACGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCCGCGGAAAGGATAGGGGGAAAGATCAACGCCacgag > 1:303755/1‑235 (MQ=255) tatCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGAAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAAAGGTACGCCGGTAGACACCGAACTGAACCAGCTGGGCGGACCGTCTCGAATGAACATCGGTCAG‑TACCTCGAAACCCACCATGGTATGGCGTGGCAAGGAATCGCGGGAAAGAGCAACGCCAGGcg > 1:518805/1‑238 (MQ=255) cGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTTAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGCCAG‑ATCCTCAAAACCACCCTGGGGATGGTTCGGAAAAGAATCGGCGaaaaaaaaaacccacagcgggaaaaa > 1:551621/1‑217 (MQ=255) cGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCCTGCTGAAAcag > 2:883017/1‑239 (MQ=255) cGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCCGGGAATGGCGGGGAAAGGGATCGGCGACAAACAAAAACCCATGCTGAAAaag > 1:917493/1‑239 (MQ=255) cgcgcgttcccacgttgtaaaaaGATGGCAGGTCGTACAGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGAAACGCCCTACGATGAAAACGGTACGCCGGAAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCaaga < 1:223162/218‑1 (MQ=255) cgccttgtcccagtcggTGAAAAGATGGCAGGTCGTCACGGTAAAAAGGGTTTAATTTCTAAGATCAACCCGATCGAAGATAGGCCTTACGATGAAAACGGTACGCCGGTAGACATCGGACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCaaga < 1:346581/224‑1 (MQ=255) tATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCACCCTGGGAATGGCTGCGAAAGGTGTCGGCGCAAAGATAAACACCAAGCTGAAAAAGAAGAaaaaagagg > 1:590678/1‑236 (MQ=255) cagtcgtgTGAAAAGATGGCAGGTCGGCACGGTAAAAAGGTTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGGTGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGaa < 1:1296885/232‑1 (MQ=255) ccTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCAAAAGGTATCGGCGACAAGCTCACCGCCATGCTGAAACAGCAGCACGAAGTCGCGaa > 2:572416/1‑236 (MQ=255) cTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACCTCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAAcg > 2:526286/1‑237 (MQ=255) ggttaaaaaaTGCCAGGGCGTCACGGTAACAAGGGTGTAATTTTTAAGGTCAACCCGATCGAAGATATGCCTTACGATGAAACCGGTACGCCGGTAGTCATCGGACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTgcg < 1:221428/230‑1 (MQ=255) ggTGACAAGATGGCGGGTCGTCACGGTAACAAGGGGGTAATTTCTAAGAGAAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTgcg < 1:77803/239‑1 (MQ=255) ggTGAAAAGGTGGGAGGTCGTCACGGTAACAAGGTTGTAATTTCTAAGATCAACCCGATCGAAGATTTGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTTAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTgcg < 1:111072/239‑1 (MQ=255) gTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGAATCGGCGCCAAGATCAACGCCATGCTGAAACAGCACCAAGAAGTCGCGAAACTgcgc > 2:111072/1‑239 (MQ=255) gTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAA‑ATCCCCGAAACCCACCTGGGTATGGCTGCGACAGGGATCGGCGACAAGATCGACGCCATGCTGAAACACCAGAAAGAAAACGCGAAAcagggc > 1:838189/1‑234 (MQ=255) aCAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGaa < 2:113831/239‑1 (MQ=255) aGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAg < 2:590678/238‑1 (MQ=255) aGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAg < 2:648181/238‑1 (MQ=255) gtcgtcACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAATCGCGAAACTGCGCGAATTCATCCAgcgt > 2:1156349/1‑239 (MQ=255) gcgtttgcGGTAAGAAGGGTGTATTTTTTAAAGGAAAACCGGACGAAGATTTGTCTTACGATTAAAACGGTACGCCGGGAGACATGGTTCTGAATCAGCTGGGCGTACCGTCGCGGATGAACAGCGGTCAG‑AGCCTCGAAGCCTCCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAATCTGCGCGAATTCATCCAgcg < 1:990062/231‑1 (MQ=255) cgtcACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGCAACTGCGCGAATTCATCCAgcttgc > 2:1132574/1‑239 (MQ=255) cgtcACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGGATCGGCGACAAAATCAACCCCATGCTGAAAAACAAGCAAGAAAACCCGAAACGGCGCGAATTCaacaaccgggg > 1:835338/1‑229 (MQ=255) gtcACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAgcgtgcg < 2:838189/239‑1 (MQ=255) gtcACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAgcgtgcg < 2:496056/239‑1 (MQ=255) tAAAAAGGTTGTAATTTTTAAGATCAGCCCGATCGAAGGTTTGCCTTACGATAAAAACGGGACGCCGGTAAACAGCGTACGGAACCAGCTGGGCGTACCTGCTCGTATGAACATCGGACAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGAt < 1:619075/238‑1 (MQ=255) aCAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTg < 2:551621/239‑1 (MQ=255) gtgtAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTAc < 2:1020595/227‑1 (MQ=255) gtgtAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGCCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCTACACGATCAACCCCCTGCTGAAACAGCAGCAAAAAGTCGCGAAACGGCGCGAATTCACCCACCGAGCGAACGAACAGGgc > 1:1094969/1‑236 (MQ=255) gtgtAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCCGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCCGCGAAAGGGATCGGCGACAAGATCAACGCCCTGCTGAAAACGGACCAAAGAGCCCCGAAACTGGCCCGATTCATACAGCGGGAGAACGAACTggggggc > 1:694027/1‑235 (MQ=255) gtAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAATCCCACCTGGGTATGGCTGCg < 2:1300610/141‑1 (MQ=255) gtAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGGAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTCCGACTTGGGCGCTg > 2:11654/1‑238 (MQ=255) gtAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGGACGATCTGGGCGCTg > 2:814852/1‑238 (MQ=255) gtAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGAGAAACTGCGCGAATTCATCCAGCGTCCGCACGACCTGGCCGCTg > 2:799158/1‑238 (MQ=255) gtAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGGATGGCTGCGAAAGGAATCGGCGACACCGTCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGGAACTGCGCGAATTCATCCCGCGCGGGTACAAACTggggcccga > 1:758639/1‑233 (MQ=255) tttCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGCCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGt > 2:195193/1‑238 (MQ=255) cTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTCTGGCTGCGAAAGGGATCGGTGACAAGATAAACGCCATGCTGAAACAGCAGCAAGAACTCGCGACACACCCCGAATTACTCCAGCGTGCGTACGACCTGGGCGGTCAAGTTCgg > 1:296484/1‑238 (MQ=255) aaGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCa < 2:734066/239‑1 (MQ=255) aaGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGCCa > 2:365762/1‑239 (MQ=255) aaCCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCAc < 2:1325885/111‑1 (MQ=255) aaCCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCAc > 1:1325885/1‑111 (MQ=255) cGATCGAAGATTTGCCTTTGGGTGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGAc < 1:365762/239‑1 (MQ=255) cGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGAc < 2:835338/239‑1 (MQ=255) cGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGAc < 2:499941/239‑1 (MQ=255) gaatgAAAATATGCCTTACGGTCAAACCGGTACGGCGGTACACAACGTACTGAACCAGATGGGCGTACCGGTCCGTATGAACAGCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGGCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGAcc < 1:108694/235‑1 (MQ=255) tCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCCAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGGGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTAACCTg > 2:1160367/1‑239 (MQ=255) ttGCCTTACGGTGAAAGCGGTACGCAGGGAGACCTCGTACTGAAGCCGCTGGGGCTACCGTCTCGTATGAACATCGGTCAA‑AACCGCGAAACCCACCTGGGTATGGGTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGGTGACCTGAGTACCtt < 1:994200/238‑1 (MQ=255) tGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGCACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAACGGTATAGGCGACACGATCCACGCCATGCTGAAACAGCAGCAAGAAGTCGTGAAAACGCGGGAATTCCTACCGCGAGCGTACGACCTGGGCGCTGACGTTAGCCGGAAAGGTGACCTggggaagccc > 1:936681/1‑230 (MQ=255) ccTTACGAGGAAAACGGTCAGCCAGTAGACATGGTACTGAACCAGCTTGGCGTCCCGTTGGGTATGAACATCGGTCAG‑AACCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAg < 1:883017/239‑1 (MQ=255) ttACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTAGTCAGAAAGTTGACCTGAGTACCTCAAGCg > 2:454281/1‑239 (MQ=255) tACGATGAAACCGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCCGCGCCAAGATTAACCCCCCGCTTAAACAGCCGAAAAAAGCCGCGCACCTGCCCGAATTCATCCCGCGTGCGTACGATCTGTGCGCTGACATTCGCCCGAAAGTTCAcccacgacccctcagcgg > 1:948021/1‑223 (MQ=255) tACGATGAAAACGGTAAGCCGGTAGACAACGGTCTGAACCAGCTGGGCGTACCGTCTCGGATGAACATCGGTCAG‑ATCCTCGAAACCCAACTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGa < 2:948021/239‑1 (MQ=255) aCGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCGGAAAGTTGACCTGAGTACCTTCAGCGAt > 2:1046461/1‑239 (MQ=255) aCGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTAACGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGGCGTTCGTCTGCAAGTTGACCTGAGGACCTTCACCggt > 2:320043/1‑237 (MQ=255) cGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTTGGCGCTGACGATCGTCAGAAAGTTGACCTGTGACCCTTCAGCgtgg > 2:880588/1‑236 (MQ=255) agaCGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCCGAAAGTTGACCTGAGAACCTTCACCGTTGaagaag > 2:1240205/3‑239 (MQ=255) gCCGGTAGACCTCGTACTGAACCAGCTGGGCGTACCGTCCCGTATCAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTc < 2:847043/239‑1 (MQ=255) acatggtcatGAACCAGCTGGGCGTTCCTTTTCGTTGGAACAGCGGTCAG‑GTCCCCGAAACCCCCCGGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCTAATTCATCCAGCGTGCGTACGAGCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCTGGCTGaa < 1:561589/230‑1 (MQ=255) cGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCTAAACTCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGGTATTGGTTGGGCTGAAAAca > 2:25116/1‑238 (MQ=255) cGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACACGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCCCGAACCTGCGCCAATTCATCCAGCGTGCGCACGATCTGGACCCTGACGCTCGGCAGAAAATTTGCCTGACTAACTTCCAAGAGGTAGAAGGTATGCGTATGGCTGAAAAc > 1:703857/1‑238 (MQ=255) cGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGGTGAAGAAGTTATGCGTCTGGCTGAAAAcc > 2:411877/1‑239 (MQ=255) cGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTTTGCGTCTGGCTGAAAAcc > 2:239825/1‑239 (MQ=255) cGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCTGGCTGAAAAc > 2:1076311/1‑238 (MQ=255) cGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGCCTGGCTGAAAAcc > 2:1006180/1‑239 (MQ=255) cGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCACCGATGAAGAAGTTATGCGCCTGGCTGAAAAc > 2:188542/1‑238 (MQ=255) cGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCACCCAGCGTCCGTACGAACTGGGCGCTGACGTTGCGCAGAAAGTTGACCCTGGTACCTTCGGGGGTGAAGAAGTTATGGGCCGGGGTAAAAAcc > 1:1325374/1‑239 (MQ=255) tACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCACCGATGAAGAAGTTATGCGTCTGGCTGAAAACCt > 2:310437/1‑238 (MQ=255) tACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCGGGGAATGGCTGCGAAAGGCATCGTCGACAAGTTCAACGCCCGGCTGAAACAGCAGCAAGAAGTCGCGAAACCGCGCGAATTCATCCAGCGTCCGTACTAACTGGGCGCCGACGTCAGTCGGAACGCTGGCCCGAGGACCGACAACGATGAAAAAGATACGCGTcaatgagaaaagaa > 1:505013/1‑225 (MQ=255) tGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGTCGATAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGGCCTGAGTACCTTCAGTGATGAATAAGTTATGCGTCTGGCTGAAAACCTgcgc < 2:1076405/239‑1 (MQ=255) gAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑GTCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCTGGCTGAAAACCTGCGCa < 2:470456/239‑1 (MQ=255) gAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCTGGCTGAAAACCTGCGCa < 1:392553/239‑1 (MQ=255) aCCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGAACCTTCAGCGATGAAGAAGTTATGCGTCTGGCTGAAAACCTCCGCaaa > 2:460237/1‑239 (MQ=255) | GAAACACGAGTTCGAGAAGAAACTCGAAGCGAAACGCCGCAAAATCACCCAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAG‑ATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCTGGCTGAAAACCTGCGCAAA > NC_000913/4184306‑4184777 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |