Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,487,251 C→T 12.6% L345F (CTC→TTC)  lptF → lipopolysaccharide export ABC permease

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,487,2510CT12.6% 334.7 / 6.7 134L345F (CTC→TTC) lptFlipopolysaccharide export ABC permease
Reads supporting (aligned to +/- strand):  ref base C (46/66);  new base T (14/5);  total (62/72)
Fisher's exact test for biased strand distribution p-value = 1.18e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 138 total aligned reads displayed.

CTGAACTGGCGTATCACGTTGGTATTCACCGTGTTTATGATGGCACTTATGGTCGTACCGCTGAGCGTGGTTAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGGCGCAGGAATGTATACCTTG  >  NC_000913/4487014‑4487489
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                   
ctgaactgGCGTATCACGTTGGTATTCCCCGTGTTTATGATGGCACTTGTGGTCGTACCGCTGAGCGTGGTTAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTtct                                                                                                                                                                                                                                                    <  2:927987/239‑1 (MQ=255)
ctgaactgGCGTATCACGTTGGTATTCACCGTGTTTATGAGGGCACTTATGGTCGTACCGCTGAGCGTGGTTAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTtct                                                                                                                                                                                                                                                    <  2:596687/239‑1 (MQ=255)
        gCGTATCACGTTGGTATTCACCGTGTTTATGATGGCACTTATGGTCGTACCGCTGAGCGTGGTTAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTCCTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGAAAAGGGAAACTGGACCCGAACCTATGGG‑TGTGGACCGCT‑ACACACTTTTATCTTGGTTTAACAGTTGTTTTCT‑Accctg                                                                                                                                                                                                                                           >  1:188293/1‑236 (MQ=255)
            ttctcGTTGGTTTTCCCCGTTTTTTGTGTGGCATTTAGGGTCGTGCCGCTGAGCGGGGTTAACCCACGTCAGGGACGCGTCCTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGa                                                                                                                                                                                                                                     <  1:63653/235‑1 (MQ=255)
             tCACGTTGGTATTCACCGTGTTTATGATGGCACTTATGGTCGTACCGCTGAGCGTGGTTAACACACGTCAGGGACGCGTACTGACGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGCTCCAGACCTCCCTGAAATCGAACGGCGGTAAAAGTCAACTGGACCCGCCGCTGATGG‑TGTGGGCCGTTAAACCTG‑GTTATCTGGAGTTAGGGGGGTTTCTCA‑Acccatgtgac                                                                                                                                                                                                                                      >  1:1123465/1‑231 (MQ=255)
                             cGTGTTTATGATGGCACTTATGGTCGTACCGCTGAGCGTGGTTAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGGGATTGTTCTCA‑ACCCTT‑T‑GGGCAACGTGCCGGTcccc                                                                                                                                                                                                                     >  2:559794/1‑236 (MQ=255)
                               tgtTTATGATGGCACTTATGGTCGTACCGCTGAGCGTGGTTAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATTCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAAGGAAGCTGGACCCGACGCTGCGGA‑TGTGGGCCGCG‑CACCTGGTTTATCTGGGTTTTGCACTTGTTCTCC‑ACCTTT‑T‑GGACACCGGGCCGGGGcgccgc                                                                                                                                                                                                                  >  1:1117767/1‑239 (MQ=255)
                               tgtTTATGATGGCACTTATGGTCGTACCGCTGAGCGTGGTTAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAATCTGGACCCGCCCCTCTGGC‑TGTGGACCGTG‑AACCTGCATTATCTTGCTTTAGCGTTTGTTTTCA‑CACTTT‑G‑GGAAAcccttcgcgtcccccc                                                                                                                                                                                                                   >  1:702656/1‑224 (MQ=255)
                                         ggCACTTATGGTCGTACCGCTGAGCGTGGTTAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTCAAGGTAAGCGTGACCCCACGCTGTGGAGTGTGG‑CAGTT‑AACCTGATTTATCTTGCTTTTACGATTGTGTTAC‑ACCTTT‑G‑GGACACCCGGCCCGTCCccggcccgtgggccc                                                                                                                                                                                                        >  1:959689/1‑230 (MQ=255)
                                         ggCACTTATGGTCGTACCGCTGAGCGTGGTTAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGCCGCTGTGGA‑TTTGGACCGGT‑AACCTGATTTATTTGGCTTTAGCGATTGTTTTCA‑ACCTTT‑T‑GGACACCGGGCCGGTCCGCCGCCtcccgcccc                                                                                                                                                                                                        >  2:462487/1‑231 (MQ=255)
                                              ttttgggtgtgctggggcgCGTGGTTACCCCCAGTGAGGGTGCGGTACTGTCGATGCTGCCGGCCATGCTTGTGTATCTACTTTGCTACCTGATCCAGACCTCCTGGAAATCGGAGGGCGGTAAGGGTAAGCTGGCCCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTGT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGtttt                                                                                                                                                                                                  <  1:342436/221‑1 (MQ=255)
                                                 tggtcttccccttgggCGTGGTTAACCAACGTTGGGGCCTGTTCGTGTCGATGCTGCCAGCAATGCGGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTcg                                                                                                                                                                                               <  1:503985/224‑1 (MQ=255)
                                                     cGTACGGCTGGGCGTGGTTAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTa                                                                                                                                                                                           <  2:367416/239‑1 (MQ=255)
                                                        aCCGCTGAGCGTGGTTAACCCACGTCATGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGGAAAGGGAAGCCGGCACCGACGCTGTCGA‑TGAGGACCGGT‑AGACTTATGTATCTGGGTTTAGCGATGTATATCC‑ACCTTT‑T‑GGACACCGTGACCGTCCCCCGCCCG‑AGCGCCAGattttgtcgacaag                                                                                                                                                                                        >  1:937205/1‑230 (MQ=255)
                                                        aCCGCTGAGCGTGGTTAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGTACCCGACGCTGTGGA‑TGGGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGCTGGTTTTCA‑ACCTTT‑G‑GGGCACCGCTCGGGTCGGCCGCCTG‑CGCGCCCGCTTTTCGCTTAAAg                                                                                                                                                                                        >  2:909375/1‑239 (MQ=255)
                                                        aCCGCTGAGCGTGGTTAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCCGTGGG‑TGTGGGCCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCC‑ACCCTT‑G‑GGACAACGTGCCGGGCCGCCGCCTG‑GTCGCCAGTTTTTCCCGTGAAg                                                                                                                                                                                        >  2:1034277/1‑239 (MQ=255)
                                                         ccGCTGAGCGTGGTTACCCACCGTCAGGGACGCGTACTGGCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCGTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAg                                                                                                                                                                                        <  2:319250/238‑1 (MQ=255)
                                                          cgatGATCGTTGTTACCCCACTTCGGGGACGCGTACTTTCGATGTTTCACTCAATGCTTCTGTATCTACTTTTCTTCCTGATCCAGGCCTCCCGGAAACCGACCGGCGGTAAAGGTACGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGa                                                                                                                                                                                      <  1:1273939/236‑1 (MQ=255)
                                                           gCTGGGCGTGGTTACCCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAg                                                                                                                                                                                     <  2:1287702/239‑1 (MQ=255)
                                                           cgtggggggtgTTAACCCACGTTGGGGACGCTGTCTGTCGATGCGGCAGGCCATGTGTCTTGAGTTCCTTGTCTTCCTGATCCAGACCGCCCGGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAg                                                                                                                                                                                     <  1:486673/229‑1 (MQ=255)
                                                               aGCGTGGTTAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTTGACCCGACGCTGTGGC‑TGGGGACCGGT‑AACC‑GATTTTCATGGCTTTACGGGATGTTTTCA‑ACCTTTGG‑GGCCACCG‑CCCGGTGCGCCCCCCGCCGTGCCGGTTTTTCGGCTAAAgagggggg                                                                                                                                                                                 >  1:811961/1‑232 (MQ=255)
                                                                gcttGGTTAACCCGCGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTTCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGgt                                                                                                                                                                                 <  2:980179/235‑1 (MQ=255)
                                                                gCGTGGCAAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGgt                                                                                                                                                                                 <  2:432502/238‑1 (MQ=255)
                                                                acGTGGTTACCCCACGTCAGGGACCGGTACTTGCGAGGCTGCCAGCCATGCTTCTGTAACTACTTTGCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGgtg                                                                                                                                                                                <  2:282182/238‑1 (MQ=255)
                                                                 cGTGGTTAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGgtg                                                                                                                                                                                <  2:54239/238‑1 (MQ=255)
                                                                  gTGGTTAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGCAAAAGTAAGCTGGACCCGACGCCCTGGG‑TGTGGACCGTG‑ACACTGATTTATTCGGCTTTAGCGCTTGTT‑TCACACCTTT‑GTGGACCCCG‑GCCGGGCCCCCGCCGC‑CCCGCCTGGTTTTCGCGGaaaacggggggggg                                                                                                                                                                              >  1:758083/1‑228 (MQ=255)
                                                                   tGGTTAACCCGCGGCAGGGACGCGTACTGTCGGAGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGACCCAGGCCCTCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGtgtg                                                                                                                                                                              <  2:190099/238‑1 (MQ=255)
                                                                    ggTTAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGCCCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTa                                                                                                                                                                                           <  2:601728/224‑1 (MQ=255)
                                                                       taccccACGTTAGGGACGGTTTCTGTCGCTGCTGCCCGCCATGCTGCTGATTTGTCTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAGCGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACTCCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCa                                                                                                                                                                         <  1:840537/236‑1 (MQ=255)
                                                                       tAACCCACGTTAGGGACGCGTACTGGCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCa                                                                                                                                                                         <  2:976461/239‑1 (MQ=255)
                                                                              cGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGGCCCGACCCTGTGGG‑TGGTGACCCTT‑AACCCGGTTTTTCTTGCTTTAGCGACTTTTCTCC‑ACCCTT‑T‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCCGTTTTTCGCGTTAAAGAGCgggggggggccacccttt                                                                                                                                                                  >  1:285616/1‑223 (MQ=255)
                                                                              cGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGGAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGGTTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCCGTTTTTTCCGTAAAGGGGCGgtgggggggaaccattt                                                                                                                                                                  >  2:304303/1‑225 (MQ=255)
                                                                              cGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAAGTAAACTGGACCCGACGCTGCGGA‑TGTGGACCGCT‑AACACGATTTCTCTGGCTTTAGCGAGTGTTTTCA‑CACTTT‑T‑GGACACCGCGCCGGTCCGCCGCCTC‑CGCGCCCCGTTTTTGCGGAAAGAAGCggggcgggctcctttaca                                                                                                                                                                  >  1:601728/1‑223 (MQ=255)
                                                                                 cAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACGTTTCTTCCGGATCCAGACCGCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCGGGCTTTAGCGATTGTTCTCa                                                                                                                                                                                                                                                  <  2:577852/160‑1 (MQ=255)
                                                                                    ggACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGGGATGCAACCTTTTGGCgga                                                                                                                                                            >  2:23485/1‑237 (MQ=255)
                                                                                       tccgtctgtcccttgctgcCGACCATGCTTCTGTATCTACTTTTCCTCCTGCTCCCGCCCTCCCTTAAACCTAACGGCGTTAATGGTAAGCTGGCCCCGACGGTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTTGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACGCCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACtt                                                                                                                                                         <  1:1034277/226‑1 (MQ=255)
                                                                                         cgTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCTCGTAAAGGAGCGGTGTGATGCAACCTTTTTGCCGACTTg                                                                                                                                                        >  2:94774/1‑238 (MQ=255)
                                                                                          ttttctgccggggcgccagctaTTCTTGTGTATCTTCTTTTCTTCCGGATCCAGCCCCGCCTGAAATAGAACGGCGGTAAAGGTAAGCTGGCCCCGGCGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGAc                                                                                                                                                      <  1:968731/225‑1 (MQ=255)
                                                                                              tGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGGTTTAGCGATTGGTCTCA‑ACATTT‑G‑GGAAACCGGGCCGGTCCGCCGCCTG‑CGCGCCAGGTTTTTGCGGAAAGGGGCGGGTGGAGGCAACCTTTTGGCGGACTTGACCGCt                                                                                                                                                  >  2:655017/1‑239 (MQ=255)
                                                                                                   aTGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTTATCTCA‑ACCTTT‑G‑GGACACCGGGCCGGTCCGCCGCCTG‑CGCGCCAGGTTTTCGCGTAAAGGAGCGGGGTGATGCAACCTTTTGGCGGACTTGACCCCCATATc                                                                                                                                             >  2:272117/1‑239 (MQ=255)
                                                                                                    tgctgcCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGGAAGATCGACCCCACGCTGTGGA‑TGTGGGCCGTT‑AACATTGTTTATCTGGCTCTAGCGATTTTTTTCA‑ACCTTT‑T‑GGGCCCCGTGCCAGTGCGCCCCCCG‑CGCGCCCGTTTTTCCGGCAAAGGAGGGGGGCGGTGACACCCTTTGGGGTGCTTgggccccttaatg                                                                                                                                            >  1:885146/1‑227 (MQ=255)
                                                                                                       tgcCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTa                                                                                                                                         <  2:338020/239‑1 (MQ=255)
                                                                                                          ccgcgctgtcgcgttttttttttttCTTCCGCATCCAGTCCCCCCGGAAATCCGACGGGGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTaaa                                                                                                                                       <  1:910192/217‑1 (MQ=255)
                                                                                                              caTGCTGCTGTATCTACTTTTCTTCCTTATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACt                                                                                                                                    <  2:891759/237‑1 (MQ=255)
                                                                                                               attctgctgTATTTATTTTTCTCCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTAtt                                                                                                                                 <  2:1179951/236‑1 (MQ=255)
                                                                                                                 gctgctGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGGGTGATGCAACCTTTTGGCGTACTTTACCGCTATATCGGTAAAACTAttt                                                                                                                                >  2:398138/1‑238 (MQ=255)
                                                                                                                 gctgctGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCCCCGCCCG‑CGCGCCAGGTTTTCGCGTAAAGGAGCGGTGGGATTCAACCTTTTGGCGGACTTGACCGCTATATCGGTAAAACTAttt                                                                                                                                >  2:332615/1‑238 (MQ=255)
                                                                                                                    gctgTAGCTACTTTGCTTCCTTGTCCAGGCCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTcac                                                                                                                            <  2:1123465/239‑1 (MQ=255)
                                                                                                                      tgTATCTACTTTTCTTCCTGATCAAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGaca                                                                                                                                                                                                                                   <  2:482418/135‑1 (MQ=255)
                                                                                                                          tCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCC‑ACCTTT‑G‑GGACACCGTTCCGGTCCGCCGCCTG‑CCGGCCAGTTTTTCGCGTAAAGGAGCGGGGGGATTGAACCTTTTGTCGGACTTTACCGCTATATCGGTAAAACTATTTTtaccacac                                                                                                                       >  2:243856/1‑236 (MQ=255)
                                                                                                                          tCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCCGTTTTTCCCGTAAAGGAGGGGGGGGATGCAACCTTTTTGCGGACTTTACCGCTATATCGGTAAAACAATTTTCAACCCcat                                                                                                                      >  2:340828/1‑239 (MQ=255)
                                                                                                                          tCTACTTTTATTCCTGATCCAGCCCCCCCTGAAAGCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACcat                                                                                                                      <  2:528263/239‑1 (MQ=255)
                                                                                                                             aCTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTTGCGTAAAGGAGCGGTGTGATGCAACCTTTTTGCGGACTTGACCGCTATATCGGTAAAACTATTTTCACCACcatcat                                                                                                                   >  2:1316387/1‑239 (MQ=255)
                                                                                                                              cTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTcacca                                                                                                                          <  2:881526/231‑1 (MQ=255)
                                                                                                                               ttttCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AAACTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CCCGCCAGTTTTTCGCGTAAAGGAGCGGGGTGATGCAACCTTTTGGCGGACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCatga                                                                                                                 >  2:1114008/1‑239 (MQ=255)
                                                                                                                                  tcttcCTGATCCAGCCCTCCCTGAAATCGACCGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCAtgatga                                                                                                              <  2:123643/239‑1 (MQ=255)
                                                                                                                                  tcttcCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACCCTCTGGA‑TTGGGACCGTT‑AACCTGATTTTTCTGGGTTTAGGCAGTGGTCTCA‑ACCCTT‑G‑GGGCACAGTGCCCGGACGCCGCCTG‑CGCGCCCATTTTTTGCCTAACAGCACGGAGGGTGGGCACCTATTGGCGTTATTTTCCCCTCTACTGGGAAAAATATTTTCAccaccacaacagtta                                                                                                              >  1:569273/1‑230 (MQ=255)
                                                                                                                                   cttcCTGATCCAGACCTCCCTGAAATCGAACGGGGGTAAAGGGAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCGTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGac                                                                                                             <  2:82712/239‑1 (MQ=255)
                                                                                                                                    ttccttgcccAGACCCCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGGCGCTGTGGA‑TGGGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGaca                                                                                                            <  1:1271427/231‑1 (MQ=255)
                                                                                                                                    ttcCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGTCCCGACCCTGGTGC‑TTTGGGACGTT‑AACCTGATTTATCTGGCTTTAACGATTGTTCTCA‑GCCTTT‑T‑GGACACCGTGCCGGTCCGCCGCCCG‑CGGCCCAGGTTTTTGCGTAAAGGGGCGGGGGGGTTCCACCTTTTGGCGTGTCTGACCGGTGTATTGGTAAAAAAATTTTTaccacccaccaaatgaa                                                                                                             >  1:916921/1‑227 (MQ=255)
                                                                                                                                    ttcCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGaca                                                                                                            <  2:747920/239‑1 (MQ=255)
                                                                                                                                    tgccTGGTCCAGACCTCCCTGAAATCGAACGGTGGTAAAGGTAAGCGGGACCGGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACCCCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGaca                                                                                                            <  1:94774/237‑1 (MQ=255)
                                                                                                                                           ctcaccccccccTGAAATGTAACGGTGGTAAGGGTAAGCTGGCCCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCa                                                                                                     <  1:559794/230‑1 (MQ=255)
                                                                                                                                                     ccTGAAATCGAACGGCGGAAAAGGCTAACCGGAACCGACCCTGTGGA‑TGTGGACCGTT‑TACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑GGCGCCCGTTTTTCGCGTAAAGGGGCGGTGTGATg                                                                                                                                                                           >  2:1306920/1‑159 (MQ=255)
                                                                                                                                                               aaCGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGGGGGGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGGAAAACTATTTTTACCACCATCCAGATGAAACCGTTCATGCTGGGGTCGCTGTCGGGc                                                                                 >  2:868700/1‑239 (MQ=255)
                                                                                                                                                                      gTAAAGGTAAGCGGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATc                                                                           <  2:198063/238‑1 (MQ=255)
                                                                                                                                                                               aGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCatg                                                                                                                  >  2:806146/1‑190 (MQ=255)
                                                                                                                                                                                gCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGGGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTAATGCTGGTGTCGCTGTCGGGAATTATCAAGTTTGTCGa                                                                >  2:515194/1‑239 (MQ=255)
                                                                                                                                                                                     aCCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑CACTTT‑G‑GGACACCGTTCCGGCTCGCCGCCTG‑CGCGCCAGTATTTCGCGTAAAGGAGCgga                                                                                                                                                                                 >  2:80209/1‑120 (MQ=255)
                                                                                                                                                                                         gggtctttggt‑tgtggaCCGTT‑AACCTGTTTTTTCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGGGCCGGGCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGaa                                                      <  1:23485/232‑1 (MQ=255)
                                                                                                                                                                                         gACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGaa                                                      >  1:84796/1‑239 (MQ=255)
                                                                                                                                                                                                tgga‑tgtggaCCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCACGTTTGTCGA‑TCAGCTGAAACAAgac                                               >  2:205981/1‑237 (MQ=255)
                                                                                                                                                                                                tgga‑tgtggaCCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAAcc                                               >  2:672764/1‑239 (MQ=255)
                                                                                                                                                                                                         gaCCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTACAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGGTTTGCTGTCGGGCATTATCAAGTTTTTGGA‑CAAGCTGAAAAAAGCCggggcggg                                       >  1:660178/1‑234 (MQ=255)
                                                                                                                                                                                                         gaCCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGT‑TCAGCTGAAAAAAGCCGGGCAggg                                       >  2:1221381/1‑239 (MQ=255)
                                                                                                                                                                                                         gaCCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAGCCGGGCAggg                                       >  2:1161746/1‑239 (MQ=255)
                                                                                                                                                                                                           ccGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGCCGTCCTTGACCGCTCTATCGGTAAAACTATTTTCACCACCATCCTGTTGAAACTGTTCATGCTGGTGGCGCTGTCGGGCATTATCAAGTTTTCCGA‑TCAGCCTGACAAACCCGGGCGggggg                                     >  1:990946/1‑238 (MQ=255)
                                                                                                                                                                                                              tt‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGAGTAAAGGAGCGGTGGGATGCAACCTTTTGGCCTACTTGACCGCTAGATCGGTAAAACAATGTGCACCACCATCATGATGCAACTGTTCATGCGGGGGTCGCGTTCGGGCCTTATCAAGTTT‑TCAACTCAACTGGAAAAATACGGGCAGGGGGGtt                                  >  1:422974/1‑239 (MQ=255)
                                                                                                                                                                                                               t‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAGCCGGGCAGGGGAGtt                                  >  2:1129381/1‑238 (MQ=255)
                                                                                                                                                                                                                  aCCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGCGTGATGAAACCTTTGGGCGTACTTGCCCGCTATATCGGTAAAACTATTTTCACCACCACCATGATGACACTGTTCATGTTGGTTTCGCTTCCGGGCATTATCAAGTTTG‑CGAGTCAGCTGCAAAAAACCGGGAGGGGGGGTAaca                               >  1:1033138/1‑238 (MQ=255)
                                                                                                                                                                                                                       aTTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGAcgcg                          >  2:59883/1‑239 (MQ=255)
                                                                                                                                                                                                                       aTTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGGGTCGTTGTCGGGCATTATCCAGTTTGTCGA‑TCCACTGAAAAAAACCGGGGAGGGGAGGTACGAcgcg                          >  1:74790/1‑239 (MQ=255)
                                                                                                                                                                                                                       aTTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGAGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGAcgcg                          >  2:709191/1‑239 (MQ=255)
                                                                                                                                                                                                                         ttATTTGGGTTTTGCGCTTTTTTCCA‑CCCTTT‑G‑GGACCCCGTGCCGGTCCGCGGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGtt                        <  1:1221381/239‑1 (MQ=255)
                                                                                                                                                                                                                            tttGGCTTTGGGGATTTTTTTCA‑TCCTTG‑G‑GGAAACGGGGCGGGTCCGCCGCCTG‑CGCGCCAGTTTTTGGCTTAAAGGGGCGGTGTGATGCAACCTTTTGGGTTACTTGGCCGGTAGATCGGTAAAACTATTTTCCCCACCATCATGATGACACTGTTCATGCGGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAgg                     <  1:1315038/237‑1 (MQ=255)
                                                                                                                                                                                                                            tCTGGTTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGaa                                                      <  2:1054451/206‑1 (MQ=255)
                                                                                                                                                                                                                              tgtcctgtcgttttGTTCCTA‑ACCTTT‑G‑GTGAGCCGTGCCGGTCAGCCGCTTG‑CGCGGCAGTTTTTCGTGTAAAGGCGCGGTGTGATGCAACCGTTTGGCGTACTTGACCGCTATAGCGGTAAACCTATTTTCACCACCATCATGATGACCCTGTTCATGCTGGTGGCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGgcg                   <  1:546108/227‑1 (MQ=255)
                                                                                                                                                                                                                              tGGCTTTAGGGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGgcg                   <  2:27597/239‑1 (MQ=255)
                                                                                                                                                                                                                                gCTTTTGCGTTTTTTCTCA‑TCCTTT‑G‑GGACCCCGTGCCGGGCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGGCGCa                 <  1:304303/239‑1 (MQ=255)
                                                                                                                                                                                                                                gCTTTAGCGCTTTTTTTTA‑TCCTTT‑G‑GGACTCCGGGCCGGTCCGCCGCCTG‑CTCGCCAGTTTTTCGCGTAAAGGCGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGGCGCa                 <  1:1224796/239‑1 (MQ=255)
                                                                                                                                                                                                                                 gtttAGCCTTTTTTCTCA‑ACCTTT‑G‑GGACCCCGGGCCGGGCCGGCTCCTT‑GGCGGCAGTTTTGCGCGTAAAGGGGCGGTGTGATGCACCCTTTTGGCGTTCTGGACCGCTATATCGGTAAAACTATTTCCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGGCGCa                 <  1:655017/237‑1 (MQ=255)
                                                                                                                                                                                                                                 ctttgtcgttttttCTCA‑TCCTTT‑G‑GGCCCCCGTGCCGGTCCGCCGCCTG‑CGCGCCAGGTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGGCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGGCGCAg                <  1:1161746/227‑1 (MQ=255)
                                                                                                                                                                                                                                 cTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACCCCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGGCGCa                 <  2:879317/238‑1 (MQ=255)
                                                                                                                                                                                                                                 cTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCTTCATGATGACACTCTTCATGCTGGTGTAGCTGTCGTGCATTATCAAGTTTGTCGC‑TAAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGGCGCAg                >  1:1073587/1‑239 (MQ=255)
                                                                                                                                                                                                                                 cTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGGCGCa                 <  2:916921/238‑1 (MQ=255)
                                                                                                                                                                                                                                     agtcgttGTTTTCA‑ACCTTT‑G‑GGAACCCGTGGCGGGCCGCCGCCGT‑CGCTCCCGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCCTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTGCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGGCGCAGGAAt            <  1:272117/234‑1 (MQ=255)
                                                                                                                                                                                                                                     aGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTTTCGA‑TCAGCCGAAAAAAGCCGGGCAGGGGGATGACGACGCGTTAGGGGCAGGaag            >  1:354945/1‑238 (MQ=255)
                                                                                                                                                                                                                                        gATTGTTCCCA‑ACCTTG‑G‑GGACCCCGTGCCGGTCCGGCGCCTG‑CGCGCCAGGTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGGCGCAGGAATGt          <  2:660178/238‑1 (MQ=255)
                                                                                                                                                                                                                                           tGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTTGCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACCGGTTAGGCGCAGGaaggataa       >  2:121773/1‑232 (MQ=255)
                                                                                                                                                                                                                                               ctcA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATACAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTCTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAACAAAGCCTGGCAGGGGCGTTACGAAGCGCTCGGGGCGAGAATGAAAACCTTg  >  1:496124/1‑239 (MQ=255)
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                   
CTGAACTGGCGTATCACGTTGGTATTCACCGTGTTTATGATGGCACTTATGGTCGTACCGCTGAGCGTGGTTAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑ACCTTT‑G‑GGACACCGTGCCGGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGGCGCAGGAATGTATACCTTG  >  NC_000913/4487014‑4487489

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑