| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,064,898 | G→C | 12.8% | S33S (TCG→TCC) | scpC → | propionyl‑CoA:succinate CoA transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,064,898 | 0 | G | C | 12.8% | 96.6 / 2.5 | 55 | S33S (TCG→TCC) | scpC | propionyl‑CoA:succinate CoA transferase |
| Reads supporting (aligned to +/- strand): ref base G (28/16); new base C (3/5); total (34/21) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.44e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.09e-01 | |||||||||||
TATTCAGGGGATGCGCCGCGCGGTGTATGACAGCGAAGATTACCAGGAAGGGATGAACGCTTTCCTCGAAAAACGTAAACCTAATTTCGTT‑GGTCATTAATCCCTGCGAACGAAGGAGTAAAAATGGAAACTCAGTGGACAAGGATGACCGCCAATGAAGCGGCAGAAATTATCCAGCATAACGACATGGTGGC‑ATTTAGCGGCTTTACCCCGGCGGGTTCGCCGAAAGCCCTACCCACCGCGATTGCCCGCAGAGCTAACGAACAGCATGAGGCCAAAAAGCCGTATCAAATTCGCCTTCTGACGGGTGCGTCAATCAGCGCCGCCGCTGACGATGTACTTTCTGACGCCGATGCTGTTTCCTGGCGTGCGCC‑ATATCAAACATCGTCCGGTTTACGTAAAAAGATCAATCAGGGCGCGGTGAGTTTCGTTGACCTGCATTTGAG > NC_000913/3064677‑3065122 | tATTCAGGGGATGCGCCGCGCGGCGTATGACAGCGAAGATTACCAGGAAGGGATGAACGCTTTCCTCGAAAAACGTAAACCTAATTTCGTT‑GGTCATTAATCCCTGCGAACGAAGGAGTAAAAATGGAAACTCAGTGGACAAGGATGACCGCCAATGAAGCGGCAGAAATTATCCAGCATAACGACATGGTGGC‑ATTTAGCGGCTTTACCCCGGCGGGGTCGCCGaa > 2:2826/1‑227 (MQ=255) gcaaGGAGAGGCGCCGCGCGGTGTAAGACAGCAAAAATTACGAGGAAGGGATGAACGTTTCCCTCGAAAAACGAAAACCTAATTGCGTT‑GGTCATTAATCCCGGCGAACGAAGGAGTAAAAATGAAAACTCAGTGAAAAAGGATGACCGCCAATGAAGCGGCAGAAATTATCCAGCATAACGACATGGTGGC‑ATTTAGCGGCTTTACCCCGGCGGGTTCGCCGAAAGc < 2:173537/225‑1 (MQ=255) aTGCGCCGCGCGGTGTATGACAGCGAAGATTACCAGGAAGGGATGAACGCTTTCCTCGAAAAACGTAAACCTAATTTCGTT‑GGTCATTAATCCCTGCGAACGAAGGAGTAAAAATGGAAACTCAGTGGACAAGGATGACCGCCAATGAAGCGGCAGAAATTATCCAGCATAACGACATGGTGGC‑ATTTAGCGGCTTTACCCCGGCGGGTTCGCCCAAAGCCTTAccc > 2:611983/1‑227 (MQ=255) aTGCGCCGCGCGGTGTATGACAGCGAAGATTACCAGGAAGGGATGAACGCTTTCCTCGAAAAACGTAAACCTAATTTCGTT‑GGTCATTAATCCCTGCGAACGAAGAAGTAAAAATGGAAACTCAGTGGACAAGGATGACCGCCAATGAAGCGGCAGAAATTATCCAGCATAACGACATGGAGGC‑ATTTAGCGGCTTTACCCCGGCGGGGTCGCCGAAACCCCTAccc > 2:418051/1‑227 (MQ=255) tGCGCCGCGCGGTGTATGACAGCGAAGATTACCAGGAAGGGATGAACGCTTTCCTCGAAAAACGTAAACCTAATTTCGTT‑GGTCATTAATCCCTGCGAACGAAGGAGTAAAAATGGAAACTCAGTGGACAAGGATGACCGCCAATGAAGCGGCAGCAATTATCCACCATAACGACATGGTGGC‑ATTTAGCGGCTTTCCCCCGGCGGGTTACCCGAAACCCCTACCCAc > 1:552774/1‑228 (MQ=255) tGCGCCGCGCGGTGGATGACAGCGAAGCTTACCAGGAAGGGATGAACGCTTTCCTCGAAAAACGTAAACCTAATTTCGTT‑GGACATTAATCCCTGCGAACGAAGGAGTCAAAATGGTAACTCAGTGGACAAGGATGACCGCCAATGAAGCGGCAGAAATTATCCAGCACAACGACATGGTGGC‑ATTTAGCGGCTTTACCCCGTCAGGTTCTACCAAACCCCTCCCCa > 2:645252/1‑227 (MQ=255) cGAAGATTACCAGGAAGGGATGAACGCTTTCCTCGAAAAACGTAAACCTAATTTCGTT‑GGTCATTAATCCCTGCGACCGAAGGAGTAAAAATGGAAACTCAGTGGACAAGGATGACCGCCAATGAAGCGGCAGAAATTATCCAGCATAACGACATGGTGGC‑ATTTAGCGGCTTTACCCCGGCGGGGTGGCCGAAAGACCCACCCCACCCCATGTCCCCCAGAGCCAAc > 1:482675/1‑228 (MQ=255) cGAAGATTACCAGGAAGGGATGAACGCTTTCCTCGAAAAACGTAAACCTAATTTCGTT‑GGTCATTAATCCCTGCGACCGAAGGAGTAAAAATGGAAACTCAGTGGACAAGGATGACCGCCAATGAAGCGCAAGACATTATCCAGCAAAATG‑CCTGGTGGCAATTTACCGGGCTTACCCCGCCGGGGTCTCCCAAAACCCTAACCCCcccgctagtcccccggccaaca > 1:21270/1‑210 (MQ=255) cGAAGATTACCAGGAAGGGATGAACGCTTTCCTCGAAAAACGTAAACCTAATTTCGTT‑GGTCATTAATCCCTGCGAACGAAGGCGTAAAAATGGAAACTCAGTGGACAAGGATGACCGCCAATGAAGCGGCAGAAATTATCCAGCATAACGACATGGTGGA‑ATTTAGCGGCTTTACCCCGGCGGGTTCGCCGAAAGCCCTACCAACCGCAATTAACCGCAGGGCTAAc > 2:438734/1‑228 (MQ=255) cGAAGATTACCAGGAAGGGATGAACGCTTTCCTCGAAAAACGTAAACCTAATTTCGTT‑GGTCATTAATCCCTGCGAACGAAGGAGTAAAAATGGAAACTCAGTGGACAAGGATGACCGCCAATGAAGCGGCAGAAATTATCCAGCATAACGACATGGTGGC‑ATTTAGCGGCTTTACCCCGGCGGGGTCGCCGCAAGCCCTACCCACCGCGATTGCCCGCAGGGCTaag > 2:350706/1‑227 (MQ=255) cGAAGATTACCAGGAAGGGATGAACGCTTTCCTCGAAAAACGTAAACCTAATTTCGTT‑GGTCATTAATCCCTGCGAACGAAGGAGTAAAAATGGAAACTCAGTGGACAAGGATGACCGCCAATGAAGCGGCAGAAATTATCCAGCATAACGACATGGTGGC‑ATTTAGCGGCTTTACCACGGCGGGTTCTCCGAAAACCCTACCCACCGCGATTGCCCGCAAGGCTAAc > 2:336144/1‑228 (MQ=255) cGAAGATTACCAGGAAGGGATGAACGCTTTCCTCGAAAAACGTAAACCTAATTTCGTT‑GGTCATTAATCCCTGCGAACGAAGGAGTAAAAATGGAAACTCAGTGGACAAGGATGACCGCCAATGAAGCGGCAGAAATTATCCAGCATAACGACATGGTGGA‑ATTTAGCGGCTTTACCCCGGCGGGTTTGCCGAAAGCCCCACCCCCCGCGACTGCCCGCAGAGCTaa > 2:406500/1‑227 (MQ=255) cGAAGATTACCAGGAAGGGATGAACGCTTTCCTCGAAAAACGTAAACCTAATTTCGTT‑GGTCATTAATCCCTGCGAACGAAGGAGTAAAAATGGAAACTCAGTGGACAAGGATGACCGCCAATGAAGCGGCAGAAATTATCAAGCATAACGACATGGTGGC‑ATTTAGCGGCTTTACCCCGGCGGGTTCGCCGAAAGCCCTAACCACCCACATTGCCCGccagactaac > 1:181601/1‑219 (MQ=255) cGAAGATTACCAGGAAGGGATGAACGCTTTCCTCGAAAAACGTAAACCTAATTTCGTT‑GGTCATTAATCCCTGCGAACGAAGGAGTAAAAATGGAAACTCAGTGGACAAGGATGACCGCCAATGAAGCGGCAGAAATTATACAGCATAACGACATGGGGGC‑ATTTAGCGGCTTTACCCCAGCGGGTTCCCCGAAAGCCCTCCCCACCGCGATTGCCCGccacgcaaac > 2:321690/1‑219 (MQ=255) aaGATTACCAGGAAGGGATGAACGCTTTCCTCGAAAAACGTAAACCTAATTTCGTT‑GGTCATTAATCCCTGCGAACGAAGGAGTAAAAATGGAAACTCAGTGGACAAGGATGACCGCCAATGAAGCGGCAGAAATTATCCAGCATAACGACATGGTGGC‑ATTTAGCGGCTTTACCCCGGCGGGTTCGCCGAAAGCCCTACCCACCGCGATTGCCCGCAGAGCTAAccg > 2:226181/1‑226 (MQ=255) aaGATTACCAGGAAGGGATGAACGCTTTCCTCGAAAAACGTAAACCTAATTTCGTT‑GGTCATTAATCCCTGCGAACGAAGGAGTAAAAATGGAAACTCAGTGGACAAGGATGACCGCCAATGAAGCGGCAGAAATTATCCAGCATAACGACATGGTGGC‑ATTTAGCGGCTTTACCCCGGCGGGTTAGCCGCAAGCCCTACCCACCGCGGTTGCCCGCAGAGCTCACg > 2:574500/1‑227 (MQ=255) aGGGATGAACGCTTTCCTCGAAAAACGTAAACCTAATTTCGTT‑GGTCATTAATCCCTGCGAACGAAGGAGTAAAAATGGAAACTCAGTGGACAAGGATGACCGCCAATGAAGCGGCAGAAATTATCCAGCATAACGACATGGTGGC‑ATTTAGCGGCTTTACCCCGGCGGGTTCGCCGAAAGCCCTACCCACCGCGCATGCCCGCCGAGCTAACGAACAGCATGAGGc > 2:455797/1‑227 (MQ=255) ggatgtaaccttttCATCAAAAAACG‑AAACCATATTTCGTTGGGTCAGTACACCCTGAAAACAAGGAAGTAAAAATGGAACCACAGGGAAAAAGGAGGACCGCCAATGAAGCGGCAGAAATTATCCAGCATAACGACATGGTGGC‑ATTTAGCGGCTTTACCCCGGCGGGTTCGCCGAAAGCCCTACCCACCGCGATTGCCCGCAGAGCTAACGAACAGCATGAGGCCa < 1:604777/217‑1 (MQ=255) ccatagtgttgttgcatatAACCCCCGCGACAGAAGGAAAAAAAAGAGAACACCAGTGAAAAGGGTTGGCCGCCAATGAAGCGGCAGAAATTATCCAGCATAACGACATGGTGGC‑ATTTAGCGGCTTTACCCCGGCGGGTTCGCCGAAAGCCCTACCCACCGCGATTGCCCGCAGAGCTAACGAACAGCATGAGGCCAAAAAGCCGTATCAAATTCGCCTTCTGACgg < 1:611983/210‑1 (MQ=255) tAATTTCGTT‑GGTCATTAATCCCTGCGAACGAAGGAGTAAAAATGGAAACTCAGTGGACAAGGATGACCGCCAATGAAGCGGCAGAAATTATCCAGCATAACGACATGGTGGC‑ATTTAGCGGCTTTACCCCGGCGGGTTCGCCGAAAGCCCTACCCACCGCGATTGCCCGCAGAGCTAACGAACAGCATGAGGCCAAAAAGCCGTATCAAATTCGCCTTCTGACggg > 2:571549/1‑227 (MQ=255) tt‑GGTCATTAATCCCTGCGAACGAAGGAGTAAAAATGGAAACTCAGTGGACAAGGATGACCGCCAATGAAGCGGCAGAAATTATCCAGCATAACGACATGGTGGC‑ATTTAGCGGCTTTACCCCGGCGGGTTCGCCGAAAGCCCTACCCACCGCGATTGCCCGCAGAGCTAACGAACAGCATGAGGCCAAAAAGCCGTATCAAATTCGCCTTCTGAAGGGTGCggaaa > 2:410479/1‑223 (MQ=255) t‑GGTCATTAATCCCTGCGAACGAAGGAGTAAAAATGGAAACTCAGTGGACAAGGATGACCGCCAATGAAGCGGCAGAAATTATCCAGCATAACGACATGGTGGC‑ATTTAGCGGCTTTACCCCGTCGGGTTCGCCGAAAGCCCTACCCACCGCGATTTCACGCAGGGCTCACGCACAGCATGAGGCCAAAAAGCCGTATCAAATTGCCCTTCTGACGGGTGAGTCAATc > 2:169643/1‑228 (MQ=255) t‑GGTCATTAATCCCTGCGAACGAAGGAGTAAAAATGGAAACTCAGTGGACAAGGATGACCGCCAATGAAGCGGCAGAAATTATCCAGCATAACGACATGGTGGC‑ATTTAGCGGCTTTACCCCGGCGGGTTCGCCGAAAGCCCTACCCACCGCGATTGCCCGCAGAGCTAACGAACAGCATGAGGCCAAAAAGCCGTATCAAATTCGCCTTCTGCCGGGGGCGTCAATc > 2:371059/1‑228 (MQ=255) tAATCCCTGCGAACGAAGGAGTAAAAATGGAAACTCAGTGGACAAGGATGACCGCCAATGAAGCGGCAGAAATTATCCAGCATAACGACATGGTGGC‑ATTTAGCGGCTTTACCCCGGCGGGTTCGCCGAAAGCCCTACCCACCGCCATTGCCCGCAGGGCTACAGAAAAGCATGAGGCCCAAAAACCGGATCAAAATCGCCATCTGACggggggggcaaaaagccccg > 1:497935/1‑211 (MQ=255) ccTGCGAACGAAGGAGTAAAAATGGAAACTCAGTGGACAAGGATGACCGCCAATGAAGCGGCAGAAATTATCCAGCATAACGACATGGTGGC‑ATTTAGCGGCTTTACCCCGGCGGGTTCGCCGAAAGCCCTACCCACCGCGATTTCCCGCAGAGCTAACGAACAGCATGAGGCCAAAAAGCCGTATCAAATTCGCCTTCTTACGGGTGCGTCAATCAGCCCCGCCGCt > 2:499532/1‑228 (MQ=255) gCGAACGAAGGAGTAAAAATGGAAACTCAGTGGACAAGGATGACCGCCAATGAAGCGGCAGAAATTATCCAGCATAACGACATGGTGGC‑ATTTAGCGGCTTTACCCCGGCGGGTTCGCCGAAAGCCCTACCCACCGCGATTGCCCGCAGAGCTAACGAACAGCATGAGGCCAAAAAGCCGGATCAAATTCGCCTTCTGACGGGTGCGCCACTCAGCTCCGCCCCTg > 2:327335/1‑226 (MQ=255) aaagaaaaaaaaaGGGAAACCCGGGGGACAGGGAGTGCCGCCAATGAAGCGGCAGAAATTATCCAGCATAACGACATGGTGGC‑ATTTAGCGGCTTTACCCCGGCGGGTTCGCCGAAAGCCCTACCCACCGCGATTGCCCGCAGAGCTAACGAACAGCATGAGGCCAAAAAGCCGTATCAAATTCGCCTTCTGACGGGTGCGTCAATCAGCGCCGCCGCTGACGATGTa < 2:482675/220‑1 (MQ=255) aagaggtacccgaaaagaaaGCGGCAGAAATTATCCAGCCGATAGACATGGGGGC‑ATTTGGGCGCTTTGCCCGGGCGGGTGCGCCGAAATCCATGCCCACCGGGGTTGCCCGAAGAGCTGACGAACAGCATGAGGCAAAAAAGCCGTTTAAAATTCGCCTTCTGACGGGTGCGGCAATCAGCGCCGACGCTGACGATGTACTTTCTGACGCCGATGCTGTTTCCTGGc < 1:438734/210‑1 (MQ=255) ggtgccccccctaTGAAGCGGCAGAAATTATCCAGCATCACGACCGGGTGTC‑ATTTAGCGTCGTTTCCCGGGCGGGTTACCCGAAAGCCCTCCCCGCCCGTATTCCCCGCAGAGCTAACGAACAGCAGGAGGCCAAAAAGCCGTATCAAATTCGCCTTCTAACGGGTGCGTCAATCAGCGCCGCCGCTGACGATGTACTTTCTGACGCCGATGCTGTTTCCTGGCGTg < 1:2826/216‑1 (MQ=255) cccccccAATGAGGCGGCAAAAATTATCCAGCATACCGACATGGTGTC‑ATTTAGCGGCTTTACCCCGGGGGGTTCGCCGAAAGCCCTACCCACCGCGATTGCCCGCAGAGCTAACGAACAGCATGAGGCCAAAAAGCCGTATCAAATTCGCCTTCTGACGGGTGCGTCAATCAGCGCCGCCGCTGACGATGTACTTTCTGACGCCGATGCTGTTTCCTGGCGTGCGcc < 1:571549/223‑1 (MQ=255) cacccgaaaTGAAGGGGAAAAAATTTCCCATCATAGCGACATGGGGGC‑ATTTGGCGGCCTGACCCCGGCGGTTTACCAGAAAGCCCCACCCCCCGCAATTGCCCCCCGAGTTAACGAACAGCATGGGGCCAAAACGCCGTACCAAATTCGCCTTCTGACGGGTGCGTCAATCAGCGCCGCCGCTGACGATGTACTTTCTGACGCCGATGCTGTTTCCTGGCGTGCGcc < 1:227137/221‑1 (MQ=255) cccctcAATGAGGGGGGAGAAATGTCCCCGCATAAAGACAGGGTGCC‑ATTTAGCGGCTTTCCCCCGGCGGGTTCGCCGAAAGCCCTACCCACCGGGATTGCCCGCAGAGCTAACGAACAGCATGAGGCCAAAAAGCCGTATCAAATTCGCCTTCTGACGGGTGCGTCAATCAGCGCCGCCGCTGACGATGTACTTTCTGACGCCGATGCTGTTTCCTGGCGTGCGcc < 1:321690/222‑1 (MQ=255) cccGCCAATGAACGGGCAGAAATTCTCCGGCAGAACCACATGGTGGC‑CTTTGGCGGTTTTACCCCGGGCGGTTCGCCGAAAGCCCCACCCACCGCGATTGCCCGCAGCGCTAACGAACAGCATGAGGCCAAAAAGCCGTATCAAATTCGCCTTCTGACGGGTGCGTCAATCAGCGCCGCCGCTGACGATGTACTTTCTGACGCCGATGCTGTTTCCTGGCGTGCGcc < 1:350706/226‑1 (MQ=255) cccGCCAAAGACGGGGCAAAAATGACCCAGCAGAACGAAAGGGGGGA‑ATGTAGCGGCTTTACCCAGGCGGGTGCGCAAAAAGCCCTCCCCACCGCGATTGCCCGCAGAGCTAACGAACAGCATGAGGCCAAAAGGCCGTATCAAATTCGCCTTCTGACGGGTGCGTCAATCAGCTCCGCCGCTGACGATGTACTTTCTGACGCCGATGCTGTTTCCTGGCGTGCGcc < 1:523668/226‑1 (MQ=255) aTGAAGCGGCAGAAATTATCCAGCATAACGACATGGTGGC‑ATTTAGCGGCTTTACCCCGGCGGGGTCGCCGAAAGCCCTACCCCCCGCGATTGCCCGCAGAGCTAACGAACAGCATGAGGCCCAACAGCCGTATCCAATTCGCCTTCTCACGGGAGCGGCAATCAGCGCCGCCGCTGCCGCTGGTCTTTCTATCCCCGCGGCTGTTTCCCGGCGTGCGCC‑CAATCaaa > 1:279588/1‑228 (MQ=255) taaggtggaaaaaTTAACCATGATAAGGGTATGGTGGC‑ATTTAGCGGCTTTACCCCGGCGGGTTCGCCGAAAGCCCTACCCCCCGCGATTGCCCGCAGAGCTAACGAACAGCATGAGGCCAAAAAGCCGTATCAAATTCGCCTTCTGACGGGTGCGTCAATCAGCGCCGCCGCTGACGATGTACTTTCTGACGCCGATGCTGTTTCCTGGCGTGCGCC‑ATACCAAAc < 1:226181/217‑1 (MQ=255) gCAGAAATTATCCAGCATAACGACATGGTGGC‑ATTTAGCGGCTTTACCCCGGCGGGTTCGCCGAAAGCCCTACCCACCGCGATTGCCCGCAGAGCTAACGAACAGCATGAGGCCAAAAAGCCGTATCAAATTCGCCTTCTGACGGGTGCGTCAATCAGCGCCGCCGCTGACGATGTACTTTCTGACGCCGAGGCTGTTTCCTGGCGTGCGCC‑ATATCAAACATCGTcc > 2:441637/1‑228 (MQ=255) aaTTATCCCGCCTAACGTATTGGTGGC‑TTTTAGAGCTTTTCCCCCGGAGGGTTCCCCGAAACCCCTACCCACCGCGATTGCCCGCAGATCTAACGAACAGCATGAGGCCAAAAAGCCGTATCAAATTCGCCTTCTGACGGGTGCGTCAATCAGCGCCGCCGCTGACGATGTACTTTCTGACGCCGATGCTGTTTCCTGGCGTGCGCC‑ATATCAAACATCGTCCGGttt < 1:264494/228‑1 (MQ=255) caagaaaaCGAGAGGGTGGC‑TTTAAGGGGCTTTCCCACGGGGGATGTCCCAAAAGCCCTCCCCACGGGGATTGCCCGCAGGGCTAACGAACAGCATGAGGCCAAAAAGCCTTATCAAATGCGCCTTCTGACGGGTGCGTCAATAAGCGCCGCCGCTGACGATGTACTTTCTGACGCCGATGCTGTTTCCTGGCGTGCGCC‑ATATCAAACATCGTCCGGTTTACGTaa < 1:657681/221‑1 (MQ=255) gCATAACGACATGGTGGC‑ATTTAGCGGCTTTACCCCGGCGGGTTCGCCGAAAGCCCTACCCACCGCGATTGCCCGCAGAGCTAACGAACAGCATGAGGCCAAAAAGCCGTATCAAATTCGCCTTCTGACGGGTGCGTCAATCAGAGCCGCCGCTGACGATGTACTTTCTGACGCCGATGCTGTTTCCTGGCGTGCGCC‑CTATCAAACATCGTCCGGTTTACGTaaaaa > 2:490868/1‑228 (MQ=255) cATAACGACATGGTGGC‑ATTTAGCGGCTTTACCCCGGCGGGTTCGCCGAAAGCCCTACCCACCGCGATTTCCCGCCGAGCTAACGCACAGCATGAGGCCAAAAAGCCGTATCAAATTCGCCTTCTGACGGGTGCGTCAATCCGCGCCCCCGCTGACGATGTACTTTCTGACCCCGATGCTGTTTCCTGGCGTGCGCC‑ATACCCAACATCGCCCGGTTTCCCTaaaaaa > 1:539676/1‑227 (MQ=255) cATAACGACATGGTGGC‑ATTTAGCGGCTTTACCCCGGCGGGTTCGCCGAAAGCCCTACCCACCGCGATTGCCCGCAGAGCTAACGAACAGCATGAGGCCAAAAAGCCGTATCAAATTCGCCTTCTGACGGGGGCGTCAATCAGCGCCGCCGCTGACCATGGACCTTCTTACGCCGGAGCCGTTTCCCGGCGGGCGCCAATTTCAAAAAAC‑TCCGGGTTAAGaaaaaaa > 1:304522/1‑227 (MQ=255) cATAACGACATGGTGGC‑ATTTAGCGGCTTTACCCCGGCGGGTTCCCCGAAAGCCCTACCCACCGCGATTGCCCGCAGAGCTAACGAACAGCATGAGGCCAAAAAGCCGTATCAAATTCGCCTTCTGACGGGTGCGTCAATCAGCGCCGCCGCTGACGATGTACTTTCTGACGCCGAt > 2:181090/1‑177 (MQ=255) aaaaCGACATGGTGGC‑TTTTAGCGGCTTTCCCCGGGCGGGTTCGCCGAAAGCCCTACCCACCGGGATTGCCCGAAGAGCTAACGAACAGCATGAGGCCAAAAAGCCGTATCAAATTCGCCTTCTGACGGGTGCGTCAATCAGCGCCGCCGCTGACGATGTACTTTCTGACGCCGATGCTGTTTCCTGGCGTGCGCC‑ATATCAAACATCGTCCGGTTTACGTaaaa < 2:497935/223‑1 (MQ=255) aTAACGACATGGTGGC‑ATTTAGCGGCTTTACCCCGGCGGGTTCCCCGAAAGCCCTACCCACCGCGATTGCCCGCAGAGCTAACGAACAGCATGAGGCCAAAAAGCCGTATCAAATTCGCCTTCTGACGGGTGCGTCAATCAGCGCCGCCGCTGACGATGTACTTTCTGACGCCGATg < 1:181090/177‑1 (MQ=255) tggtggC‑ATTTAGCGGCTTTACCCCGGCGGGTTCGCCGAAAGCCCTACCCACCGCGATTGCCCGCAGAGCTAACGAACAGCATGAGGCCAAAAAGCCGTATCCAATTCGCCTTCTGACGGGTGCGTCAATCAGCGCCGCCGCTGACGATGTACTTTCTGACGCCGATGCTGTTTCCTGGCGGGCGCC‑ATATCCAACATCGTACGGGTTACGGAAAAAGAAAAATCAgg > 1:175667/1‑228 (MQ=255) tggtggC‑ATTTAGCGGCTTTACCCCGGCGGGTTCGCCGAAAGCCCTACCCACCGCGATTGCCCGCAGAGCTAACGAACAGCATGAGGCCAAAAAGCCGTATCAAATTCGc > 2:334713/1‑110 (MQ=255) tggtggC‑ATTTAGCGGCTTTACCCCGGCGGGTTCGCCGAAAGCCCTACCCACCGCGATTGCCCGCAGAGCTAACGAACAGCATGAGGCCAAAAAGCCGTATCAAATTCGCCTTCTGACGGGTGCGTCAATCAGCGCCGCCGCTGACGATGTACTTTCTGACGCCGATGCTGTTTCCTGGCGTGCGCC‑ATATCAAACATCGTCCGGTTTACGTAAAAAAATCAATCAgg > 1:390265/1‑228 (MQ=255) ggtggC‑ATTTAGCGGCTTTACCCCGGCGGGTTCGCCGAAAGCCCTACCCACCGCGATTGCCCGCAGAGCTAACGAACAGCATGAGGCCAAAAAGCCGTATCAAATTCGcc < 1:334713/110‑1 (MQ=255) gtggC‑ATTTAGGGGCTTTCCCCCGGGGGGTTAGCCGAAAGCCCTACCCACCGCGATTGCCCGCGGGGCTAACGAACAGCAGGAGGCAAAAAAGCCGTATCAAATTCGCCTTCTGACGGGTGCGTCAATCAGCGCCGCCGCTGACGATGTACTTTCTGACGCCGATGCTGTTTCCTGGCGTGCGCC‑ATATCAAACATCGTCCGGTTTACGTAAAAAGATCAATCAGGgc < 1:495463/228‑1 (MQ=255) gtggC‑ATTTAGCGGCTTTACCCCGGCGGGTTCGCCGAAAGCCCTACCCACCGCGATTGCCCGCAGAGCTAACGAACAGCATGAGGCCAAAAAGCCGTATCAAATTCGCCTTCTGACGGGTGCGTCAATCAGCGCCGCCGCTGACGATGTACTTTCTGACGCCGATGCTGTTTCCTGGCGTGCGCC‑ATATCAAACATCGTCCGGTTTACGTAAAAAGATCAATCAggg < 2:390265/227‑1 (MQ=255) ctttGGCGGCTTTCCCCCGGCGGGTTCGCAGAAAGCCCTCACCACCCGGATTGCCCGAAGGGCTAACGAACAGCAGGAGGCCAAAAAGCCGTATCAAATTCGCCTTCTGACGGGTGCGTCAATCAGCGCCGCCGCTGACGATGTACTTTCTGACGCCGATGCTGTTTCCTGGCGTGCGCC‑ATATCAAACATCGTCCGGTTTACGTAAAAAGATCAATCAGGGCGCGGt < 2:246507/227‑1 (MQ=255) cGGCTTTACCCCGGCGGGTTCGCCGAAAGCCCTACCCACCGCGATTGCCCGCAGAGCTAACGAACAGCATGAGGCCAAAAAGCCGTATCAAATTCGCCTTCTGACGGGTGCGTCAATCAGCGCCGCCGCTGACGATGTACTTTCTGACGCCGATGCTGTTTCCTGGCGGGCGCC‑ATCTCAAACATCGTCCGGTTTACGTAAAAAGATCAATCAGGGCGCGGGGAGttt > 2:174983/1‑228 (MQ=255) cccccGGGGGGTTCGCCGAAAGCCCCACCCCCCGCGTTTGCCCGCAGGGCTAACGAACAGCATGAGGCCAAAACGCCCTATCAAATTCGCCTTCTGACGGGTGCGTCAATCAGCGCCGCCGCTGACGATGTACTTTCTGACGCCGATGCTGTTTCCTGGCGTGCGCC‑ATATCAAACATCGTCCGGTTTACGTAAAAAGATCAATCAGGGCGCGGTGAGTTTCGTTGAc < 1:174983/227‑1 (MQ=255) ttCGCCGAAAGCCCTACCCACCGCGATTGCCCGCAGAGCTAACGAACAGCCTGAGGCCCAAACGCCGTATCCAATTCGCCTTCTGACGGGTGCGGCAATCAGCGCCGCCGCTTACGATGTACTTTCTGTCGCCGATTCCGTTTCCTGTGGGGCGCC‑ATATCAAACATCGTCCGGCTTTAGTAACAAGCGCAATCCGGGAGGGGCGAGATTCGTGGACCCCCATTTGAg > 1:102691/1‑228 (MQ=255) | TATTCAGGGGATGCGCCGCGCGGTGTATGACAGCGAAGATTACCAGGAAGGGATGAACGCTTTCCTCGAAAAACGTAAACCTAATTTCGTT‑GGTCATTAATCCCTGCGAACGAAGGAGTAAAAATGGAAACTCAGTGGACAAGGATGACCGCCAATGAAGCGGCAGAAATTATCCAGCATAACGACATGGTGGC‑ATTTAGCGGCTTTACCCCGGCGGGTTCGCCGAAAGCCCTACCCACCGCGATTGCCCGCAGAGCTAACGAACAGCATGAGGCCAAAAAGCCGTATCAAATTCGCCTTCTGACGGGTGCGTCAATCAGCGCCGCCGCTGACGATGTACTTTCTGACGCCGATGCTGTTTCCTGGCGTGCGCC‑ATATCAAACATCGTCCGGTTTACGTAAAAAGATCAATCAGGGCGCGGTGAGTTTCGTTGACCTGCATTTGAG > NC_000913/3064677‑3065122 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |