| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,571,895 | A→G | 20.2% | L536P (CTC→CCC) | glgB ← | 1,4‑alpha‑glucan branching enzyme |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,571,895 | 0 | A | G | 20.2% | 122.1 / 3.2 | 61 | L536P (CTC→CCC) | glgB | 1,4‑alpha‑glucan branching enzyme |
| Reads supporting (aligned to +/- strand): ref base A (14/33); new base G (7/7); total (21/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.06e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGTTATCGCCGCCTTCCAACAGATGCCAGTCGAGGCTGGCGTCATGGTTCCACTCGCGGCCCTGGGCAAATTCGTTACCCATGAACAGTAGTTTCTTGCCCGGG‑AATGCCCACATCCAGCCATAGTAGGCGCGC‑AGGTTCGCGAATTTCTGCCATGCGTCGCCCGGCATGCGGTCGAGAATCGATTTTTTACCGTGGACCACTTCATCATGCGACAACGGCAGGACGAAGTTTTCAGTGTA‑GTTGTAGAGAATCCCGAAGGTCAGTTTATCGTGATGATACTGACGATAAACCGGGTCGAGCTTCATGTAG‑TC‑CAGGGTGTCATGCATCCAGCCGAGGTTCCACTTGTACCAGAAGCCCAGACCGCCCATATCCTGCGGACGAGAAACGCCA > NC_000913/3571680‑3572110 | ggttcaaatccgcccccAGCCGCGGGGCACCGGGGGGCTAGTTTTCGCCGCCTTCCAAGAGAGGCCAGTCGAGGCGGGCGTCAGGGTTCCACTCGCGGCCCTGGGCAAATTCGTTACCCATGAACAGTAGTTTCTTGCCCGGG‑AATGCCCACATCCAGCCATAGTAGGCGCGC‑AGGTTCGCGAATTTCTGCCATGCGTCGCCCGGCATGCGGTCGAGAATCGAttttt < 1:132870/213‑1 (MQ=255) gttccggtccccccccggccGCTGGACCGCGTTGTGCCGATTAACGCCGCCGTCCCACGGAAGCCAGTTGAGGCTGGCGTCATGGTTCCACTCGCGGCCCTGGGCAAATTCGTTACCCATGAACAGTAGTTTCTTGCCCGGG‑AATGCCCACATCCAGCCATAGTAGGCGCGC‑AGGTTCGCGAATTTCTGCCATGCGTCGCCCGGCATGCGGTCGAGAATCGAttttt < 1:106389/208‑1 (MQ=255) cAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGTTATCGCCGCCTTCCAACAGATGCCAGTCGAGGCTGGCGTCATGGTTCCACTCGCGGCCCTGGGCAAATTCGTTACCCATGAACAGTAGTTTCTTGCCCGGG‑AATGCCCACATCCAGCCATAGTAGGCGCGC‑AGGTTCGCGAATTTCTGCCATGCGTCGCCCGGCATGCGGTCGGGACTCGCTTTTTTAc > 2:516290/1‑227 (MQ=255) cgctCGCGCACCAGACGCTGGACGCCGTGGTGCCAGTTATCGCCGCCTGCCAACAGATGCCAGTCGAGGCTGGCGTCATGGTTCCACTCGCGGCCCTGGGCAAATTCGTTACCCATGAACAGTAGTTGCTTGCCCGGG‑AATGCCCACATCCAGCCATAGTAGGCGCGC‑AGGTTCGCGAATTTCTGCCATGCGTCGCCCGGCATGCGGTCGAGAATCGATTTTTTACCg < 1:113988/225‑1 (MQ=255) agtcccccccaaaggcGCTGGACCCCGGGTTTCCAGTTACCTCCGCCTTCCAACAGATGCCAGTCGAAGGTGGCGTCATGGTTCCACTCGCGGCCCGGGGCAAATTCGTTAACCATGAACAGTAGTTTCTTGCCCGGG‑AATGCCCACATTCAGCCATAGTAGGCGCGC‑AGGTTCGCGAATTTCTGCCATGCGTCGCCCGGCATGCGGTCGAGAATCGATTTTTTACCg < 1:573732/213‑1 (MQ=255) gATCGCGCACCAGACGCTGGACTCCGTGGTGCCAGTTATCGCCGCCTTCCAACAGATGCCAGTCGAGGCTGGCGTCATGGTTCCACTCGCGGCCCTGGGCAAATTCGTTACCCATGAACAGTAGTTTCTTGCCCGGG‑AATGCCCACATCCAGCCATAGTAGGCGCGC‑AGGTTCGCGAATTTCTGCCATGCGTCGCCCGGCATGCGGTCGAGAATCGATTTTTTACCg < 2:231371/227‑1 (MQ=255) tCGGGCACCAGGCGCTGGTCACCGTGGTGCCAGTTAGCGCCGCCTTCCAACAGATGCCACTCGAGGCGGGCGTCATGTTTCCACTCGCGGCACTGGGCAAATTCGTTACCCATGAACAGTAGTTTCTTGCCCGGG‑AATGCCCACATCCAGCCATAGTAGGCGCGC‑AGGTTCGCTAATTTCTGCCATGCGTCGCCCGGCATGCGGTCGAGAATCGATTTTTTACCGTg < 1:19363/227‑1 (MQ=255) cgcACCAGACGCTGGACACCGTGGTGCCAGTTATCGCCGCCTTCCAACAGATGCCAGTCGAGGCTGGCGTCATGGTTCCACTCGCGGCCCTGGGCAAATTCGTTACCCATGAACAGTAGTTTCTTGCCCGGG‑AATGCCCACATCCAGCCATAGTAGGCGCGC‑AGGTTCGCGCATTTCTGCCATGCGTCGCCCGGCATGCGGTCGGGAATCGAGTTTTTACCGTgggc > 2:408149/1‑225 (MQ=255) cgcACCAGACGCTGGACACCGTGGTGCCAGTTATCGCCGCCTTCCAACAGATGCCAGTCGAGGCTGGCGTCATGGTTCCACTCGCGGCCCTGGGCAAATTCGTTACCCATGAACAGTAGTTTCTTGCCCGGG‑AATGCCCACATCCAGCCATAGTAGGCGCGC‑AGGTTCGCGAATTTCTGCCATGCGGCGCCCGGCATGCGGGCGGGAATCGATTTTTTACCGTGGAc > 2:372439/1‑227 (MQ=255) ggacggtggggCCAGTTTTCGCCGCCTTTCAACAGATCCACGTCGAGGCTGGCGGCAAGGTTCCACCCGCGGCCCTGGGAAAATTCGTTGCCCATGAACAGGTGTTTCGTGCCCGGG‑AATGCCCACAACCAACCATAGTAGGCGCGC‑AGGTTCGCGAATTTCTGCCATGCGCCGCCCGGCATGCGGTCGAGAAGCGATTTTGTACCGTGGACCACTGCATCATGCGAc < 1:220418/223‑1 (MQ=255) cGTGGTGCCAGTTATCGCCGCCTTCCAACAGATGCCAGTCGAGGCTGGCGTCATGGTTCCACTCGCGGCCCTGGGCAAATTCGTTACCCATGAACAGTAGTTTCTTGCCCGGG‑AATGCCCACATCCAGCCATAGTAGGCGCGC‑AGGTTCGCGAATTTTTGCCATGCGTCTCCCGGCATGCGGTCGGGAATCGTTTTTTTACCGTGGACACCTTCACCCTCCGACTACg > 2:288860/1‑228 (MQ=255) tgCCAGTTATCGCCGCCTTCCAACAGATGCCAGTCGAGGCTGGCGTCATGGTCCCCCTCGCGGCCCTGGGCAAATTCGTTACCCATGAACAGTAGTTTCTTGCCCCGG‑AATGCCCACATCCAGCCATCGTAGGCGCGC‑AGGTTCGCGCATGTCTGCCCTGCGTCGCCCGTCAAGCGGTGGGGAACCGATTTTTTACCCTGGGCCCCTtcaacctacgccaccggaag > 1:253184/1‑210 (MQ=255) gTTATCGCCGCCTTCCAACAGATGCCAGTCGAGGCTGGCGTCATGGTTCCACTCGCGGCCCTGGGCAAATTCGTTACCCATGAACAGTAGTTTCTTGCCCGGG‑AATGCCCACATCCAGCCATAGTAGGCGCGC‑AGGTTCGCGAATTTCTGCCATGCGTCGCCCGGCATGCGGTCGAGAATCGAttt > 2:591456/1‑186 (MQ=255) cgccccCTTCCAACAGAGGCCAGTCGAGGCCGGCGTCATGGTTCCCCTCGCGGCCCTGGGCAAATTCGTTACCCATGAACAGTAGGTTCTTGCCCGGG‑AATGCCCACATCCAGCCATAGTAGGCGCGC‑AGGTTCGCGAATTTCTGCCATGCGTCGCCCGGCATGCGGTCGAGAATCGATTTTTTACCGTGGACCACTTCATCATGCGACAACGGCAGGACGAAGtttt < 1:372439/228‑1 (MQ=255) ccccccctCCCACAGGTGCCAGTCGAGGCTGGGTGGCTGGTTCCCCTCGCGGGCGTGGGCAAATTCGTTACCCATGAAAAGGAGTTTCTTGCCCGGG‑GATGCCCACATCCAGCCTTAGTAGGCGCGC‑AGGTTCGCGAATTTCTGCCATGCGTCGCCCGGCATGCGGTCGGGAATCGATTTTTTACCGTGGACCACTTCATCATGCGACAACGGCAGGACGAAGtttt < 1:316700/220‑1 (MQ=255) gccTTCCAACAGGTGCCATTCGGGGCGGGCGCCATGGTTCCACTCGCGGCCCTGGGCAAATTCGTTACCCATGAACAGTAGTTTCTTGCCCGGG‑AATGCCCACATCCAGCCATAGTAGGCGCGC‑AGGTTCGCGAATTTCTGCCATGCGTCGCCCGGCATGCGGTCGAGAATCGATTTTTTACCGTGGACCACTTCATCATGCGACAACGGCAGGACGAAGTTTTCAg < 1:241770/227‑1 (MQ=255) tCCAACAGATGCCAGTCGAGGCTGGCGTCATGGTTCCACTCGCGGCCCTGGGCAAATTCGTTACCCATGAACAGTAGTTTCTTGCCCGGG‑AATGCCCACATCCAGCCATAGTAGGCGCGC‑AGGTTCGCGAATTTCTGCCATGCGTCGCCCGGCATGCGGTCGAGAATCGATTTTTTACCGTGGACCACTTCATCATGCGACAACGGCAGGACGAAGTTTTCAgtg < 2:67166/225‑1 (MQ=255) tggtccatttgAGGCTGGCGTCATTGTTCCACTCGCGGCCCTGGGCAAATTCGTTACCCATGAACAGTAGTTTCTTGCCCGGG‑AATGCCCACAGCCAGGCATAGTAGGCGCGC‑AGGTTCGCGAATTTCTGCCATGCGTCGCCCGGCATGCGGTCGAGAATCGATTTTTTACCGTGGACCACTTCATCATGCGACAACGGCAGGACGAAGTTTTCAGTGTA‑GTTGTaga < 1:286725/218‑1 (MQ=255) aTGCCAGTCGAGGCTGGCGTCATGGTTCCACTCGCGGCCCTGGGCAAATTCGTTACCCATGAACAGTAGTTTCTTGCCCGGG‑AATGCCCACATCCAGCCATAGTAGGCGCGC‑AGGTTCGCGAATTTCTACCATGCGTCGCCCGGCATGCGGTCGAGAATCGATTTTTTACCGTGGACCACTTCATCATGCGACAACGGACGGCCCAAGTTTTCAgtgaaatattaaag > 1:246893/1‑217 (MQ=255) tGCCAGTCGGGGCTGGGGTCATGGTTCCACTCGCGGCCCTGGGCAAATTCGTTACCCATGAACAGTAGTTTCTTGCCCGGG‑AATGCCCACATCCAGCCATAGTAGGCGCGC‑AGGTTCGCGAATTTCTGCCATGCGTCGCCCGGCATGCGGTCGAGAATCGATTTTTTACCGTGGACCACTTCATCATGCGACAACGGCAGGACGAAGTTTTCAGTGTA‑GTTGTAgaga < 2:3006/228‑1 (MQ=255) gCCAGTCGAGGCTGGCGTCATGGTTCCACTCGCGGCCCTGGGCAAATTCGTTACCCATGAACAGTAGTTTCTTGCCCGGG‑AATGCCCACATCCAGCCATAGTAGGCGCGC‑AGGTTCGCGAATTTCTGCCATGCGTCGCCCGGCATGCGGTCGGGAATGGATATTTTACCGTGGACCCCTTCATCATGGGACACAGCCAGGCAGAAGTTTTCA‑TGTAGGTTGTAAAGaa > 1:629430/1‑228 (MQ=255) aGTCGAGGCTGGCGTCATGGTTCCACTCGCGGCCCTGGGCAAATTCGTTACCCATGAACAGTAGTTTCTTGCCCGGG‑AATGCCCACATCCAGCCATAGTAGGCGCGC‑AGGTTCGCGAATTTCTGCCATGCGTCGCCCGGCATGCGGTCGAGAATCGATTTTTTACCGTGGACCACTTCCTCATGCGACAACGGCAGGACGAAGTTTTCAGTGTA‑GTTGTAGAGAATcc > 2:371435/1‑228 (MQ=255) ggttgCGTCATGGTTCCCCCCGGGGCCCGGGGAAAATTCGTTACCCATGAACAGTAGTTTCTTGCCCGGG‑AATGCCCACATCCAGCCATAGTAGGCGCGC‑AGGTTCGCGAATTTCTGCCATGCGTCGCCCGGCATGCGGTCGAGAATCGATTTTTTACCGTGGACCACTTCATCATGCGACAACGGCAGGACGAAGTTTTCAGTGTA‑GTTGTAGAGAATCCCGAAgg < 1:113470/223‑1 (MQ=255) cGTCATGGTTCCACTCGCGGCCCTGGGCAAATTCGTTACCCATGAACAGTAGTTTCTTGCCCGGG‑AATGCCCACATCCAGCCATAGTAGGCGCGC‑AGGTTCGCGAATTTCTGCCATGCGTCGCCCGGCATGCGGCCGGGCATCGATTTTTTACCGTGGACCCCTTCCTCCTGCGGAACCGCCCGAGCGAAGTTTTCGGTGCA‑GTTGTGAGGAATCCCGTAGGTCaagt > 1:388860/1‑225 (MQ=255) tttGGTTCCCCCCGGGGCCCGGGGCAAATTCGTTACCCATGAACGGTAGGTTCTTGCCCGGG‑AATGCCCACATCCAGCCATAGTAGGCGCGC‑AGGTTCGCGAATTTCTGCCATGCGTCGCCCGGCATGCGGTCGAGAATCGATTTTTTACCGTGGACCACTTCATCATGCGACAACGGCAGGACGAAGTTTTCAGTGTA‑GTTGTAGAGAATCCCGAAGGTCAGTTTAt < 1:589327/226‑1 (MQ=255) tcgttttccctccccgGCCCTGGGCAAATTCGTTCCCCTTGAACAGTGCTTTCTTGCCCGGG‑AATTCCCCAATCCAGCCATAGTAGGCGCGC‑AGGTTCGCGAATTTCTGCCATGCGTCGCCCGGCATGCGGTCGAGAATCGATTTTTTACCGTGGACCACTTCATCATGCGACAACGGCAGGACGAAGTTTTCAGTGTA‑GTTGTAGAGAATCCCGAAGGTCAGTTTAt < 1:294009/214‑1 (MQ=255) tCGGGGCCCTGGGCAAATTCGTTACCGAGGAACAGTAGTTGCTTGCCCGGG‑AATGCCCACATCCAGCCATAGTGAGCGAGC‑AGGTTCGCGAATTTCTGCCATGCGTCGCCCGGCATGCGGTCGAGAATCGATTTTTTACCGTGGACCACTTCATCATGCGACAACGGCAGGACGAAGTTTTCAGTGTA‑GTTGTAGAGAATCCCGAAGGTCAGTTTATCGTGATGATAc < 2:584656/228‑1 (MQ=255) ccggggCCCTGGGCAAATTCGTAACCCATGAACAGTAGTTTCTTGCCCGGG‑AATGCCCAAACCCCGCCATAGTAGGCGCGC‑AGGTTCGCGAATTTCTGCCATGCGTCGCCCGGCATGCGGTCGAGAATCGATTTTTTACCGTGGACCACTTCATCATGCGACAACGGCAGGACGAAGTTTTCAGTGTA‑GTTGTAGAGAATCCCGAAGGTCAGTTTATCGTGATGATAc < 1:653815/224‑1 (MQ=255) cgGCCCTGGGCAAATTCGTTACCCATGAACAGTAGTTTCTTGCCCGGG‑AATGCCCACATCCAGCCATAGTAGGCGCGC‑AGATTCGCGAATTTCTGCCATGCGTCGCCCGGCATGCGGTCGAGAATCGATTTTTTACCGTGGACCACTTCATCATGCGACAACGGCAGGACGAAGTTTTCAGGGTA‑GTTGTGGCGAATCCCGAAGGTCAGTTTATCGTGATGATACTGa > 2:63259/1‑228 (MQ=255) gCCCTGGGCAACTTCGTTACCCATGAACAGGGGTTTCTTGCCCGGG‑AATGCCCACATCCAGCCATAGTAGGCGCGC‑AGGTGCGCGAATGTCTGCCATGCGTCGCCCGGCATGCGGTCGAGAAGCGATTTTTTACCGTGGACCACTTCATCATGCGACAACGGCAGGACGAAGTTTTCAGTGTA‑GTTGTAGAGAATCCCGAAGGTCAGTTTATCGTGATGATACTGACg < 1:371435/228‑1 (MQ=255) aTTCGTTACCCATGAACAGTAGTTTCTTGCCCGGG‑AATGCCCACATCCAGCCATAGTAGGCGCGC‑AGGTTCGCGAATTTCTGCCATGCGTCGCCCGGCATGCGGTCGAGAATCGATTTTTTACCGTGGACCACTTCATCATGCGACAACGGCAGGACGAAGTTTTCATTGTA‑GTTGTAGAGAATCCCGAAGGTCAGTTTATCGTGATGATACTGACGATAAACCGGGt > 2:460283/1‑228 (MQ=255) ttgttacccttggcgcgtagtTTATTGCCCGGG‑AATGCCCTCCTCCGGCCATTGTAGGCGCGA‑GGGTTCGCGAATTTCTGCCATGCGTCGCCAGGGAGGCGGTCGGGAAGCGATTTTTTACCGTGGACCACTTCATCATGCGACAACGGCAGGACGAAGTTTTCAGTGTA‑GTTGTAGAGAATCCCGAAGGTCAGTTTATCGTGATGATACTGACGATAAACCGGGTc < 1:115010/211‑1 (MQ=255) ttgtgttccttGAAGAGTAGTTTCTTGCCCGGGTACCGCCCA‑TGCCAGCCCGAGGGGGCGCGC‑AGGGTTGCTAATTTCGGGCATGCGGCGCCCGGCATGCGGGCGGAAAACGATTTTTTACCGTGGACCACTTCAACATGCGACAACGGCAGGACGAAGTTTTCAGTGTA‑GTTGTAGAGAATCCCGAAGGTCAGTTTATCGTGATGATACTGACGATAAACCGGGTc < 1:186438/217‑1 (MQ=255) tCGTTACCCATGAACAGTAGGTTCTGCACCGGG‑AATGCCCACATCCAGCCATAGTAGGCGCGC‑AGGTTCGCGAATTTCTGCCATGCGTCGCCCGGCATGCGGTCGAGAATCGATTTTTTACCGTGGACCACTTCATCATGCGACAACGGCAGGACGAAGTTTTCAGTGTA‑GTTGTAGAGAATCCCGAAGGTCAGTTTATCGTGATGATACTGACGATAAACCGGGTc < 1:408149/227‑1 (MQ=255) ttACCCATGAACAGTAGTTTCTTGCCCGGG‑AATGCCCACATCCAGCCATAGTAGGCGCGC‑AGGTTCGCGAATTTCTGCCATGCGTCGCCCGGCATGCGGTCGAGAATCGATTTTTTACCGTGGACCACTTCATCATGCGCCAACGGCCGGACGAAGGTTTCAGTGTA‑GTTGTAGAGAATCCCGAAGGTCAGTTTATCGGGATGATACTGCCGAAAAACCGGGTCGaa > 1:544053/1‑226 (MQ=255) gacagtGAACGGTTGTTCTTTGCCCGGG‑AACGCCCACCGCCAGCATGGGTAGG‑GCGCGATGTTCGGGAATTTCTGCCCTGCGTTGCCCGGGATGGGGTCGGTAAACAATTTTTGACCGGGGACCCCGTCATCATGCGTCAACGTCAGGACGAAGTTGTCAGTGTA‑GTTGTAGAGAATCCCGAAGGTCAGTTTATCGTGATGATACTGACGATAACCCGGGTCGAGCt < 1:608139/222‑1 (MQ=255) caccAGGAACAGTGGTTTCTTGCCCGGT‑AATGCCCACACCCAGCCAATGTAGGCGCGC‑AGGTGCGCGAATTTTCGCCATGCGTCGCCCGGCATGCGGTCGAGAATCGATTTTTTACCGTGGACCACTTCATCATGCGACAACGGCAGGACGAAGTTTTCAGTGTA‑GTTGTAGAGAATCCCGAAGGTCAGTTTATCGTGATGATACTGACGATAAACCGGGTCGAGCt < 1:29711/225‑1 (MQ=255) gAACAGTAGTTTCTTGCCCGGG‑AATGCCCACATCCAGCCATAGTAGGCGCGC‑AGGTTCGCGAATTTCTGCCATGCGTCGCCCGGCATGCGGTCGAGAATCGATTTTTTACCGTGGACCACTTCATCATGCGACAACGGCAGGACGAAGTTTTCAGTGTA‑GTTGTAGAGAATCCCGAAGGTCAGTTTATCGTGATGATACTGACGATAAACCGGTGCGGGCTTCATGt > 2:547732/1‑227 (MQ=255) tgtttttttctttcCCGGG‑CATGCCCCCCTCCAGCCATAGTCGGCGCCC‑AGGTTCGCGAATTTCTGCCATGCGTCGCCCGGCATGCGGTCGAGAATCGATTTTTTACCGTGGACCACTTCATCATGCGACAACGGCAGGACGAAGTTTTCAGTGTA‑GTTGTAGAGAATCCCGAAGGTCAGTTTATCGTGATGATACTGACGATAAACCGGGTCGAGCTTCATGTAG‑Tc < 1:221483/222‑1 (MQ=255) cggtgtTTTTTTCCCGGG‑AATGCCCACCTCCCGCCATAGTAGGGGGTC‑AGGTTCGGAAATTTCCGCCATGCGTCGCCCGGCATTCGGTCGAGAATCGATTTTTTACCGTGGACCACTTCAACATGCGACAACGGCAGGACGAAGTTTTCAGTGTA‑GTTGTAGAGAATCCCGAAGGTCAGTTTATCGTGATGATACTGACGATAAACCGGGTCGAGCTTCATGTAG‑Tc‑c < 1:288860/224‑1 (MQ=255) tttgtTTCTTGCCCGGG‑AGTGCCCACATCCAGCCATAGTGGGCGCGC‑AGGTTCGCGAATTTCTGCCGTGGGGCGCCCGGCATGCGGTCGGGAATCGATTTTTTACCGTGGACCACGTCATCATGCGACAACGGCAGGACGAAGTTTTCAGTGTA‑GTTGTAGAGAATCCCGAAGGTCAGTTTATCGTGATGATACTGACGATAAACCGGGTCGAGCTTCATGTAG‑TC‑Ca < 1:333685/225‑1 (MQ=255) gtagttctgtGCCCGGG‑AATTCCCACATCCGGGCATAGTAGGCCCGC‑AGGTTCCCGAATTTCTGCCATGCGTCGCCCGGCATGCGGTCGAGAATCGATTTTTTACCGTGGACCACTTCATCATGCGACAACGGCAGGACGAAGTTTTCAGTGTA‑GTTGTAGAGAATCCCGAAGGTCAGTTTATCGTGATGATACTGACGATAAACCGGGTCGAGCTTCATGTAG‑TC‑Ca < 2:126937/219‑1 (MQ=255) tgttgtGCCCAGG‑AATGCCCGCAGCCAGCCATAGTAGGCGGGT‑AGGTTCGCGAATTTCGGCCAGTCGTCGCCCGGAAGGCGGGCGAGAAGCGATTTTTTACCGTGGACCACTTCATCATGCGACAACGGCAGGACGAAGTTTGCAGTGTA‑GTTGTAGAGAATCCCGAAGGTCAGTTTATCGTGATGATACTGACGATAAACCGGGTAGAGCTTCATGTAG‑TC‑CAGGgt < 1:453859/223‑1 (MQ=255) cccGGG‑AATGCCCACATCCAGCCATAGTAGGCGCGC‑AGGTTCGCGAATTTCTGCCATGCGTCGCCCGGCATGCGGTCGAGAATCGATTTTTTAcc > 2:287869/1‑95 (MQ=255) ccGGG‑AATGCCCACATCCAGCCATAGTAGGCGCGC‑AGGTTCGCGAATTTCTGCCATGCGTCGCCCGGCATGCGGTCGAGAATCGATTTTTTACCg < 1:287869/95‑1 (MQ=255) g‑AATGCCCACATCCAGCCATAGTAGGCGCGC‑AGGTTCGCGAATTTCTGCCATGCGTCGCCCGGCATGCGGTCGAGAATCGATTTTTTACCGTGGACCACTTCATCATGCGACAACGGCAGGACGAAGTTTTCAGTGTA‑GTTTATGAGAATCCCCAAGGTCAGTTTTTCGTGATGATACTGGCGATAAACCCGGTCGAGCTTCATGCAG‑TC‑CAGGGGGTCCGGCATcc > 1:571536/1‑227 (MQ=255) gctCCAACCATAGTAGGCGCGC‑AGGTTCGCGAATTTCCGCCATGCCGCGCCCGGCATGCGGTCGAGAATCGATTTTTTACCGTGGACCACTTCATCATGCGACAACGGCAGGACGAAGTTTTCAGTGTA‑GTTGTAGAGAATCCCGAAGGTCAGTTTATCGTGATGATACTGACGATAAACCGGGTCGAGCTTCATGTAG‑TC‑CAGGGTGTCATGCATCCAGCCGAGGtt < 2:388860/226‑1 (MQ=255) ccgccattgtggggcctc‑AGGTTCGGGAATTTCCGCCATGCGTCCCCCGGCCTGCGGTCGGGAATCGATTTTTTACCGGGGACCACTTCATCATGCGACAACGGCAGGACGAAGTTTTCAGTGTA‑GTTGTAGAGAATCCCGAAGGTCAGTTTATCGTGATGATACTGACGATAAACCGGGTCGAGCTTCATGTAG‑TC‑CAGGGTGTCATGCATCCAGCCGAGGTTCCa < 1:516290/210‑1 (MQ=255) gCCATTGTGGGGGCCG‑AGGTTCGCGAATTTCTGCCAGGCGTCGCCCGGCATGGGGTCGAGAATCGATTTTTTCCCGTGGACCACTTCATCATGCGACAACGGCAGGACGAAGTTTTCAGGGTA‑GTTGTAGAGAATCCCGAAGGTCAGTTTATCGTGATGATACTGACGATAAACCGGGTCGAGCTTCATGTAG‑TC‑CAGGGTGTCATGCATCCAGCCGAGGTTCCACtt < 1:460283/228‑1 (MQ=255) agtagGCGCGC‑AGGTTCGCGAATTTCTTCCATGCGTCGCCCGGCATGCGGTCGAGAATCGATTTTTTACCGTGGACCACTTCATCATGCGACAACGGCAGGACGAAGTTTTCATTGTA‑GTTGTAGAGAATCCCGAAGCTCAGCTTATCGTGATGATACTGCAGATAAACCGGGCCGAGCTTCCT‑TAGATCACAGGGT‑TCATGCATCCAACCAAGACTCCACTGGTAc > 1:502562/1‑227 (MQ=255) agtagGCGCGC‑AGGTTCGCGAATTTCTGCCATGCGTCGCCCGGCATGCGGTCGAGAATCGATTTTTTACCGTGGACCACTTCATCATGCGCCAACGGCAGGACGAAGTTTTCAGTGTA‑GTTGTCGAGAATCCCGAAGGTCAGTTTTTCGTGATGATACTGACGATAAACCGGGCCGAGCTTCCTGGAG‑TC‑CAGGGTGGCATGCAACCAGACAAGGTTCCACtttaac > 1:387101/1‑223 (MQ=255) tgagGCGCGC‑AGGTTGGCGAAGTTCTGCGCTGCGTTGGCCGGCATGCGGCGGAGAATCGATTTGTTCCCGTGGACCACTTCATCATGCGACAACGGCAGGACGAAGTTTTCAGTGTA‑GTGGTAGAGAATCCCGAAGGTCAGGTTATCGTGATGATACTGACGAGAAACCGGGTCGAGCTTCATGTAG‑TC‑CATGGTGTCATGCATCCAGCCGAGGTTCCACTTGTACCa < 1:372501/226‑1 (MQ=255) gaggggcgacggTTCGGGAATTTCCGCCCGGCGTCCCCCGGCATGCGGTCGAGAATCGATTTTTTACCGTGGACCACTTCATCATGCGACAACGGCAGGACGAAGTTTTCAGTGTA‑GTTGTAGAGAATCCCGAAGGTCAGTTTATCGTGATGATACTGACGATAAACCGGGTCGAGCTTCATGTAG‑TC‑CAGGGTGTCATGCATCCAGCCGAGGTTCCACTTGTACCAg < 1:482686/218‑1 (MQ=255) ggCGCGC‑AGGCTCGCGAATTTCTGCCATGCGTCGCCCGGCATGCGGTCGAGAATCGATTTTTTACCGTGGACCACTTCATCATGCGACAACGGCAGGACGCAGTTTTCAGTGCA‑GTTGTAGAGAATCCCGAAGGCAAGGTTATCGTGATGATACTGCCGCAAAAACGGGGCTGACTTCATGTCG‑TC‑CAGGGTGTCATGCTTCCAGCCGAGGTTCCACtttcaaccaa > 1:508227/1‑219 (MQ=255) cgcgc‑AGGTTCGCGAATTTCTGCCATGCGTCGCCCGGCATGCGGTCGAGAATCGATTTTTTACCGTGGACCACTTCATCATGCGACAACGGCAGGAAGAAGTTTTCAGTGTA‑GTTGTAGAGAATCCCGTAGGTCCGTTTATCGGGAGGATACTGACGATAAACAGGGTCCAGCTTCATGTCG‑TC‑CAGGGGGACAGGAATCAAGACGAGGGTCCCCTTGAACCAGAAGc > 1:207829/1‑228 (MQ=255) gTTGGCGAATGTCTGCCATGCGTCGCCCGGCATGCGGTCGAGAATCGATTTTTTACCGTGGACCACTTCATCATGCGACAACGGCAGGACGAAGTTTTCAGTGTA‑GTTGTAGAGAATCCCGAAGGTCAGTTTATCGTGATGATACTGACGATAAACCGGGTCGAGCTTCATGTAG‑TC‑CAGGGTGTCATGCATCCAGCCGAGGTTCCACTTGTACCAGAAGCCCAGAc < 2:207829/227‑1 (MQ=255) aagcctCGCCCGGCATGCGGTCGGACATCGTTTTTTTTCCGTGGACCACTTCATCAGGCGACTACCGCAGGACGAAGTTTTCAGTTTA‑GTTGTAGAGAAGCCCGATGGTCAGTTTATCATGAGGATACTGACGATAAGCCGGGTCGAGCTTCATGTAG‑TC‑CAGGGTGTCATGCATCCAGCCGAGGTTCCACTTGTACCAGAAGCCCAGACCGCCCATATCCTGCGGa < 2:207601/222‑1 (MQ=255) aTGCGTCGCCCGGCAGGCGGTCGAGAATCGATTTTTTACCGTGGACCACTTCATCAGGCGACAACGGCAGGACGAAGTTTTCAGTGTA‑GTTGTAGAGAATCCCGAAGGTCAGTTTATCGTGATGATACTGACGATAAACCGGGTCGAGCTTCATGTAG‑TC‑CAGGGTGTCATGCATCCAGCCGAGGTTCCACTTGTACCAGAAGCCCAGACCGCCCATATCCTGCGGa < 2:172145/227‑1 (MQ=255) cGCCCGGCATGCGGTCGAGAATCGATTTTTTACCGTGGACCATTTCATCATGCGACAACGGCAGGACGAAGTTTTCAGTGTA‑GTTGTAGAGAATCCCGAAGGTCAGTTTATCGTGATGATACTGACGATAAACCGGGTCGAGCTTCATGTAG‑TC‑CAGGGTGTCATGCATCCAGCCGAGGTTCCACTTGTACCAGAAGCCCAGACCGCCCATATCCTGCGGACGAGaaa < 2:94305/228‑1 (MQ=255) cGCCCGGCATGCGGTCGAGAATCGATTTTTTACCGTGGACCACTTCATCATGCGACAACGGCAGGACGAAGTTTTCAGTGTA‑GTTGTAGAGAATCCCGAAGGTCAGTTTATCGTGATGCTACTGACGATAAACCGGGTCGAGCTTCATGTAG‑TC‑CAGGGTGTCATGCATCCAGCCGGTGTTCCACTTGTACCAGAAGCCCAGACCGCCCCTATCCTGCGGCCgagaca > 2:170576/1‑226 (MQ=255) ggCATGCGGTCGAGAATCGATTTTTTACCGTGGACCACTTCATCATGCGACAACGGCAGGACGAAGTTTTCAGTGTA‑GTTGTAGAGAATCCCGAAGGTCAGTTTATCGTGATGATACTGACGATAAACCGGGTCGAGCTTCATGTAG‑TC‑CAGGGTGTCATGCATCCAGCCGAGGTTCCACTTGTACCAGAAGCCCAGACCGCCCATATCCTGCGGACGAGAAACGCCa < 2:387101/228‑1 (MQ=255) | GGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGTTATCGCCGCCTTCCAACAGATGCCAGTCGAGGCTGGCGTCATGGTTCCACTCGCGGCCCTGGGCAAATTCGTTACCCATGAACAGTAGTTTCTTGCCCGGG‑AATGCCCACATCCAGCCATAGTAGGCGCGC‑AGGTTCGCGAATTTCTGCCATGCGTCGCCCGGCATGCGGTCGAGAATCGATTTTTTACCGTGGACCACTTCATCATGCGACAACGGCAGGACGAAGTTTTCAGTGTA‑GTTGTAGAGAATCCCGAAGGTCAGTTTATCGTGATGATACTGACGATAAACCGGGTCGAGCTTCATGTAG‑TC‑CAGGGTGTCATGCATCCAGCCGAGGTTCCACTTGTACCAGAAGCCCAGACCGCCCATATCCTGCGGACGAGAAACGCCA > NC_000913/3571680‑3572110 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |