| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,638,227 | A→G | 22.0% | E196G (GAG→GGG) | pitA → | phosphate transporter, low‑affinity, tellurite importer |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,638,227 | 0 | A | G | 22.0% | 81.8 / 3.0 | 56 | E196G (GAG→GGG) | pitA | phosphate transporter, low‑affinity, tellurite importer |
| Reads supporting (aligned to +/- strand): ref base A (20/21); new base G (5/9); total (26/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.37e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACG‑CGCCC‑GTATCCACCTGACCCCAGCGGAGCG‑TG‑AAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCACGGCGCGAAC‑GATGGTCAG‑AAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATCAACAACGT > NC_000913/3638013‑3638449 | aTTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTTTTTCCCCGTTCCCACTTGATCGGCACCAAGAAAAG‑CGCCC‑CTACCCCCCTGACCCCCACGGGGCG‑GG‑Aaaaggaa > 1:463877/1‑228 (MQ=255) tGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCGATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGGGTTTGCTGGCGGTCTGATTTTCTTTCTGCGTCGCTCCTGGGGGGGGCACAAGAAACG‑CGCCC‑GTATCCACCCGACCCCCCCGGGGGG‑GG‑AAaaaaaaga > 1:619236/1‑228 (MQ=255) taaacaaagggtgtgatgaCGGGGCGGGTAGTGGGGGATCCCCTCAAATCCCCTGAAGTATTAAGTTTTTCCGGTTCTTGGATCTTTTCCCCGTGTGGC‑GGCCGGGGGTTTGCTGGGGTGCGAATTTTCTTGCTGCGTCGCTACGGGGGCGGCACCAAGAAGCG‑CGCCC‑GTACCCACCGGACCCAAGGGGGGCG‑TG‑AAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTc < 1:397977/215‑1 (MQ=255) aatggtttaatggCCGGGACGGTGGGGGTGGATGCCCTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACG‑CGCCC‑GTATCCACCTGACCCCAGCGGAGCG‑TG‑AAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGAc < 2:338532/218‑1 (MQ=255) aagggtgtgatgaCCGGGACGGCCGGGGTGGAAGCACTCAATTTCCCGAAAGTATTAAGTATTTCCGGTTCCCTGATCGTTTCCCCTATTGTC‑GGCCGGTTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACG‑CGCCC‑GTATCCACCTGACCCCAGCGGAGCG‑TG‑AAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGAc < 2:110958/220‑1 (MQ=255) tGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGGAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTTTTGCTTCGTCGCTACTGGGGCGGCCCCAAGAAACG‑GGCCC‑CTATTCACCTGACCCCACCGGAGCG‑TG‑CAAAGAAAGACGGCAAGAAAAA‑ACCGCCCTTCtcggccc > 2:34107/1‑221 (MQ=255) tGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGGTTTTCTTGCTGCCTCGCTCCTTGCGCGGCACCAAGAAACT‑CGCCC‑CGTTCCCCCCGCCCCCAACGGAGCG‑GC‑GAAAAAAAAACGGGAAGAAAAA‑accacccctccgggccgg > 1:601671/1‑216 (MQ=255) tGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACG‑CGCCC‑GTATCCACCTGACCCCCGCGGGGGG‑TG‑AAAAGAAAGACGGCAAGACAAA‑GCCTCCCtt > 2:397977/1‑219 (MQ=255) tgatgaCCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTTTTTCTGCGTCGCTACTTGGACGGCACCAAAAAAAG‑CGCCC‑TTTTTCACCTGCCCCCCGCGGCGCG‑TG‑AAAAACAAAACGGACAGAAAAA‑ACCGCCGGTATggggccgaattt > 1:502264/1‑218 (MQ=255) cGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCCCTACTGGAGCGGCACCAAGAAACG‑CGCCC‑GGATCCACCCGCACCCAGCGGAGCG‑TT‑GAAAGAAAGACGGCAAGAAAAA‑ACCGCCGTTCTGGACCCGCAtttggcggat > 2:206869/1‑220 (MQ=255) cGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTTTTGCCGCGTTGCTACTGGGGGGGGACCAAGGAAAG‑CGCCCGGTTTCCCCCTG‑CACCAACGGAGCG‑TG‑CAAAAAAAAACGGCCAGAAAAACCCCGCCG‑ACTGGCCGCGGATTGCGCTGAGCCtgt > 1:473422/1‑226 (MQ=255) ttCAGTGGTATATGTACTCCATTCCACGAAAGTATTAGTTATTTGCGTTTCTCTGATCGTCTCCCCTGTTGTC‑GGCCTGTTTTTTGCTGGCGGTCTGATTTTCTTGCTGCGGCCCATCTGGGCCGGCACCAAGAAACG‑CGCCG‑GTTTCCACCTGACCCCAGCGGGGCG‑TG‑AAAAAAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCttgc < 1:256084/227‑3 (MQ=255) agggccagCACTCAATACCCGGAAAGTATTAAGGATTTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCGTGGGGTTTGCTGGCGGTCGGATTTTCTTGCTGCGTCGCTACTGGAGCGGACCCAAGAAACG‑CGCCC‑GTACCCACCTGACCCCAGCGGAGCG‑TG‑AAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTa < 2:60072/220‑1 (MQ=255) tatCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACG‑CGCCC‑GGATCCACCTGACCCCAGCGGAGCG‑GG‑AAAAGAAAGAAGGCAAGAAAAA‑ACCGCCGTTCTGGACGCGACATGCGCTGATCCTTTCGGCTA‑TCGGCGT‑GGGGgtttt > 2:578429/1‑227 (MQ=255) cccGAAAGTTTTAAGGTTTTCGGGTTCTCTGCTCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCGTGCTGCGTCGCTACGGGAGCGGCACCAAGAAACG‑CGCCC‑GTATCCACCTGACCCCAGCGGAGCG‑TG‑AAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCa < 2:247596/228‑1 (MQ=255) cgggatgttttgatttttttcggttttcggACGGTTTCCCCT‑GTGTCGGGCCGGGTGTTTGCTGGCGGTCTTATTTGTTTGATGCGTCGCTGCTGGGGCGGCACCAAAAAACG‑CGCCC‑GTATCCACCTGACCCGAGCGGAGTG‑TA‑AAAAGAAAAACGGCAAGAAAAC‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCAc < 1:367613/212‑1 (MQ=255) cGAAAGTATTAATTATTTTCGGTTCTCTGATCGTTTCCCCTATTGCC‑GGCCTGGTGTTTGCTGGGGGTCTGATTTTCTTGCTGCGTCGCTACGGGAGCGGCACCAAGAAACG‑CGCCC‑GTATCCACCTGACCCCAGCGGAGCG‑TG‑AAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCAc < 2:619236/227‑1 (MQ=255) aagtattaagtattTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTTGTTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACG‑CGCCC‑GTATCCACCTGACCCCAGCGGAGCG‑TG‑AAAAGAAAGACGGCAAGAACAA‑ACCGCCGTTCTGGACGCGTCTTGAGCTGAACCTTGCCGCTA‑TCGGCGG‑GGCGTTTTTGccccgac > 1:445393/1‑222 (MQ=255) aagtattaagtattTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACG‑CGCCC‑GTATCCACCTGACCCCAGCGGGGCG‑TG‑AAAAGAAAGACGGCAAGAAAAA‑ACCGCCGTCTTGGCCGCGTTTTGCGCTGATCCTTTCCGCAA‑TCGGCGT‑TGCGGTTTTGCACcgcg > 1:143293/1‑228 (MQ=255) ttaagtattTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GTCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTAATGGTGCGGCACCAAGAAACG‑CGCCC‑GTTTTCCCCTGACCCCCGCGGAGCG‑TG‑ATAAGCAAGAAGGCCAGAAAAA‑CACGCCCCTCTGGACCCCGATTGCCCTGGTTCTTTCCGCCACTCGGCGG‑GCCTtttttccccgcgcggac > 1:420012/1‑215 (MQ=255) tttCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTTCGTCGCTACTGGAGCGGCACCAAGAAACG‑CGCCC‑GTATACACCTGACCCCAGCGGAGGG‑TG‑AAAAGAAAGACGGCCAGAAAAA‑ACCGCCGTTCTCGACCCGGATTGCGCTGTTCACTTCCGCCA‑TCGGAGTGGGCGTTTTccccggccgcgaccactgtca > 1:409137/1‑208 (MQ=255) tttCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGGGCGGCACCAAGAAACG‑CGCCC‑GTATCCACCTGACCCCAGCGGAGCG‑TG‑AAAAGAAAAACGGCCAGAAAAA‑GCCCCCGTTCTGGACGCGGCTTTGGCCGAACCCTTCCGCCA‑TCGGCCTGGGGGTTTGCGCCCGGGGGGAAC‑GAAggcg > 1:132693/1‑226 (MQ=255) tttCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACG‑CGCCC‑GTATCCACCTGACCCCAGCGGAGCG‑TG‑AAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGACCCGCATTGCGCTGATCCTTTCCCCTA‑TCGGCGT‑CGCGTTTTCTCACCGGGCGGAC‑ACTGGTcc > 2:488332/1‑227 (MQ=255) tttCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACCTGGGCGGCCCCCAGAAACG‑CGCCC‑GTTTCCCCCTTACCCCCCCGGGGCG‑TG‑AAAAGAAAGACGGCCAGAAAAA‑ACCCGCGGTCTGGACACCGATTGCGCGTATCCTTTCCCCCA‑TCGCGGT‑GGGGTTTTTGccgcgcgcccacaagggtca > 1:588956/1‑209 (MQ=255) tcggttctcgttgtgTTTCCCTTAGTGTC‑GGCCTGGTTGTGGCGGGCGGTTCGGTTTGCGTGCTGCTTGCTTACTGGGGCGGCACAAATGAACG‑CGCCT‑GGTCCCACCTGCCCCCAGAGGAGCG‑TA‑AAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCACGGCGCGAAC‑GATGGTCAG‑a < 1:509163/214‑1 (MQ=19) tctcTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACG‑CGCCC‑GTATCCACCTGACCCCCGCGGAGCG‑TG‑GAAAGAAAGACGGCAAGAAAAA‑GCCGCCCGTCTGGACGCGTATTGCGCTGATCCTTTCCCCTA‑TAGGCGT‑GGCGTTTTCTGACgggccggaacaggtgcaaaaaagc > 1:457517/1‑206 (MQ=255) tctggaccttttCCCCTGTGTGC‑GGCCGGGTGTTTGCTGGCGGTCTGATTTTCGTGCTGCGTCGCTACGGGAGCGGCACAAAGAAACG‑CGCCG‑GTATCCACCTGACCCAAGGGGAGCG‑GG‑AAAAGAAAGCCGGCAAGAAAAA‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCACGGCGCGAAC‑GATGGTCAG‑AAAGGCa < 1:488332/219‑1 (MQ=37) ctGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACG‑CGCCC‑GTAACCACCTGACCCCAGCGGAGCG‑TG‑AAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGAc < 2:38057/155‑1 (MQ=255) gtttgTTTCCCCTTTTGTG‑GGCGTGGTGTTTGCGGGCGGTTGTATTTTCGTGCTGGGCCGCTAGGGGGGCGGCCACAAAAAACG‑CGCCC‑GTATCCACCGGCCCCCAGCGGGGGT‑TG‑AAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCACGGCGCGAAC‑GATGGTCAG‑AAAGGCATTgg < 1:614542/224‑1 (MQ=25) tttgTTCCCCCTTTTGTC‑GGGGTTGTGTTTGCTGGCGGTCTGATTTTGTTGCTGCGGCGCTACTGGAGCGGCACAAAGAAACG‑CGCCC‑GTACCCCCCTGCCCCCAGCGGAGTG‑TG‑AAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCACGGCGCGAAC‑GATGGTCAG‑AAAGGCATTGGt < 1:540536/225‑1 (MQ=38) tatgttttccctgtttccgggCCGGGTGTTTGCTGGCTGTCTGTTTTTTTTGCTGCGTCCCTACTGGAGCGGCACCAAAAAACG‑CTCCC‑GTACCCACCTGACCCCGGCGGAGCG‑TG‑AAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCACGGCGCGAAC‑GATGGTCAG‑AAAGGCATTgg < 1:131728/209‑1 (MQ=37) aTCTTTTCCCCGTTTGGC‑GGCCTGGTTTTGGGTGGCGGCTGGATTTCTTTGCGCGGTCGCTCCTGGGGGGGCACCAGAAAACG‑GGCCG‑ATATCCACCGGACCCCAGGGGGGGT‑GG‑AAAAGAAAAACGGCAAGAAAAG‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCACGGCGCGAAC‑GATGGTCAG‑AAAGGCATTGGt < 1:206869/228‑1 (MQ=19) ttgTTTCCCCTATTGGC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACG‑CGCCC‑GTATCCACCTGACCCCAGGGGAGCG‑TG‑AAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCACGGCGCGAAC‑GATGGTCAG‑AAAGGCATTGGt < 2:558355/225‑1 (MQ=255) atgtgtataagagacgtgcccTGGTGTTTGCTGTCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACG‑CGCCC‑GTATCCACCTGACCCCAGCGGAGCG‑TG‑AAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCACGGCGCGAAC‑GATGGTCAG‑AAAGGCATTGGTc < 2:154064/209‑1 (MQ=255) tCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACG‑CGCCC‑GTATCCACCTGACCCCAGCGGAGCG‑TG‑AAAAGAAAGACGGCAAGAAAAA‑ACCCCCGGTCTGGACGCCGATTGCGCTGATCCTTTCCGCCA‑TCGGCGT‑GGGGGTTTTCCCCGGCGCGACC‑GACGGGCAG‑AAAAGCacttgggtggt > 1:558355/1‑217 (MQ=255) ggCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACG‑CGCCC‑GTATCCACCTGACCCCAGCGGAGCG‑TG‑AAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGGGTTTTTTCACGGCCCGCAC‑GATGGTCCGAAAAGGCTTTGG‑CTGGGTTTGTTGGGattt > 2:204376/1‑227 (MQ=255) gCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCCAGAAACG‑CGCCC‑GTATCCACCTGACCCCAGCGGAGCG‑GG‑AAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTCGACGCGGATTGCGCTGATCCTTTCCCCTA‑TCGGCGT‑GGGCTTTTTGCCCGGGGCGCACGGAGGGTAAG‑AAA‑GCAAGGGTCGGGGTCTGTTTGTTATGGTTGGCgcccgg > 1:569551/1‑223 (MQ=255) gggttgtttttCCTGTTGCGTCGCTATGGGAGCGGCCACAAGAAGCG‑CGCCC‑GTCTCCCCCTGACCCGAGGGGGGGG‑TG‑AAAAGAAAGACGGCAAGAAAAG‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCACGGCGCGAAC‑GATGGTCAG‑AAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCcagc < 1:418567/220‑1 (MQ=37) gtttgtgggcgcgcggacaggggAGGGGCACCAAGAAACG‑GCCCG‑GAAACCAGCTGACCCCAGCGGAGGG‑AA‑AAAAGAAGGTAGTGAAGAAAAG‑GCCGCCGGTCGGGACGAGTATTGCGCTGAGCCTTGCCGGGA‑TCGGCGG‑GGCGTTTTCGCATGGCGCGAAC‑GATGGTCAG‑AAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCg < 1:461648/207‑1 (MQ=255) ttctggggtgCTACGGGGGCGGCAACAAGAAAGG‑CGCCC‑TGAACCACCTGACCCCAG‑GGGGCGTTG‑AAAAGAAATACGGCAAGAAAAA‑GGCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCACGGCGCGAAC‑GATGGTCAG‑AAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCgtggtg < 1:34107/218‑1 (MQ=37) tGGAGCGGTCCCAAGAAACGCCGCCT‑GT‑CCCACTCGACCCCAGCGGAGCG‑TG‑AAAAGAAAGACGGCAAGAAAAA‑GCCGCCTTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCACGGCGCGAAC‑GATGGTCAG‑AAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACt < 2:454136/228‑1 (MQ=37) ggcgaaacAAAAACCG‑CCCCC‑GTAACCCCCGGACCCC‑GGGGGGCG‑GGAAAAAGAAAGACGGCAAAAAAAA‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCACGGCGCGAAC‑GATGGTCAG‑AAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCt < 1:204376/221‑1 (MQ=25) gggCACAAAGAAACG‑CCCCC‑GTAACCCCCTGACCCCGGCGGAGGT‑GG‑AAAAGAAAGGCGGCAAGAAAAG‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑GGGGAGT‑GGCGTTTTCGCACGGCGCGAAC‑GATGGTCAG‑AAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTa < 2:588956/227‑1 (MQ=255) ggCACCAAGAAACG‑CGCCC‑GTATCCACCTGACCCCAGCGGAGCG‑TG‑AAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCACGGCGCGAAC‑GATGGTCAG‑AAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCCTCCTGGTGAACATGAATGCCACTGGCTAc > 2:119258/1‑228 (MQ=255) aCCAAGAAACG‑CGCCC‑GTAACCACCGGACCCCAGCGGAGCG‑TG‑AAAAAAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCACGGCGCGAAC‑GATGGTCAG‑AAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGaa < 2:445393/228‑1 (MQ=255) aaGAAACG‑CGCCC‑GTATCCACCTGGCCCCGGGGGGGTG‑TG‑AAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCACGGCGCGAAC‑GATGGTCAG‑AAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATc < 2:601671/228‑1 (MQ=255) aaGAAACG‑CGCCC‑GTATCCACCTGCCCCCAGGGGAGCG‑TG‑AAAAAAAAGACGGCAAGAAAAA‑TCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCACGGCGCGAAC‑GATGGTCAG‑AAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATc < 2:497587/228‑1 (MQ=255) aaaaaaggacccc‑GGATCCAACTGGCCGCATGGGAGCG‑GG‑AAAAGAAAGACGGAAAAAAAAA‑GCCGCCGTTCGGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCACGGCGCGAAC‑GATGGTCAG‑AAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATc < 2:596543/218‑1 (MQ=37) ccccgcggtttacctgtggccccCGCGGAGGG‑TA‑AAAAGAAAGACGGCAAAAAAAA‑GCCGCCGTTCCGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCACGGCGCGAAC‑GATGGTCAG‑AAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCacccgt < 1:622560/209‑1 (MQ=37) ccccc‑GTACCCCCCGAACCCAGGGGGGGCG‑TG‑AAAAAAAAGCCGGAAAGAAAAG‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCACGGCGCGAAC‑GATGGTCAG‑AAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCacccgtac < 2:420012/226‑1 (MQ=37) tCCACCTGACCCGAGCGGAGCG‑TG‑AAAAGAAAGCCGGCAAGAAAAA‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCACGGCGCGAAC‑GATGGTCAG‑AAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATg < 2:132693/228‑1 (MQ=255) aCCTGACCCCAGCGGAGCG‑TG‑AAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCACGGCGCGAAC‑GATGGTCAG‑AAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCCGGGTTCCGGGGGAAAATGAAAGCCCCATGGTACCAAATACACCGCACCCGGGATGcac > 1:557752/1‑226 (MQ=37) cTGACCCCAGCGGAGCG‑TG‑AAAAGAAAGCCGGCAAGACAAA‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCAGTTTCGCACGGCGCGCAC‑GGTGGTCAA‑AACGGCATTGGTCTGGGTATGTTGGGCTTTGTTGGGGTCACGCCAGCGGGCTTCGTGGTGAACATGAACGCCACTGGGCAGGGAATCacacggcccctggagtacaca > 1:99864/1‑212 (MQ=255) cTGACCCCAGCGGAGCG‑TG‑AAAAGAAAGACGGCAAGGAAAA‑GCCGCCGTTCTGGa > 1:328001/1‑55 (MQ=255) aCCCCAGCGGAGCG‑TG‑GAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCACCGCGCGAAC‑AGTGGTCAG‑AAAGGCCTTGGGCTGGTTATGTTGGTATTGATTTGCGTCCCGCCAGCAGGCTTCGTGGGGAACATGAATGCACCTGGCTTCGAAAACAACCGGACACCGGATGGCCTcaaa > 1:249235/1‑227 (MQ=255) aGCGGAGCG‑TG‑AAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCACGGCGCGAAC‑GATGGTCAG‑AAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCCCGCCAGCAGGCTTCGTGGGGAACATGAATGCCACTGGCTACGCAATCACCCCGACCCGTGATGCCATCAACAACGt > 2:606356/1‑228 (MQ=255) | ATTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACG‑CGCCC‑GTATCCACCTGACCCCAGCGGAGCG‑TG‑AAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCACGGCGCGAAC‑GATGGTCAG‑AAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATCAACAACGT > NC_000913/3638013‑3638449 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |