| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,049,885 | T→C | intergenic (+134/‑13) | polA → / → spf | 5' to 3' DNA polymerase and 3' to 5'/5' to 3' exonuclease/Spot 42 sRNA antisense regulator of galK translation, Hfq‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,049,885 | 0 | T | C | 97.4% | 229.5 / ‑4.3 | 78 | intergenic (+134/‑13) | polA/spf | 5' to 3' DNA polymerase and 3' to 5'/5' to 3' exonuclease/Spot 42 sRNA antisense regulator of galK translation, Hfq‑dependent |
| Reads supporting (aligned to +/- strand): ref base T (0/2); new base C (33/41); total (34/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.02e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
CTAAGATTCGCCTGAACATGCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAA > NC_000913/4049748‑4050021 | cTAAGATTCGCCTGAACATTCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGt < 1:6277/143‑1 (MQ=255) tAAGATTCGCCTGAACATGCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGtt > 2:550127/1‑143 (MQ=255) aGATTCGCCTGAACATGCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTG‑AAAAAAAATTACACAAAGTGCTTTCTGAACTGAACAAAAAAGAGAAAAGTCAg > 1:358632/1‑143 (MQ=255) gCCTGAACATGCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAAATTACACAAAGTGCTTTCTTAACTGAACAAAACAGAGCAAACTTGGTcgcg > 1:18323/1‑143 (MQ=255) gCCTGAACATGCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGt > 2:217780/1‑143 (MQ=255) gCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACaga > 1:1309724/1‑143 (MQ=255) gCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACaga > 1:1309944/1‑143 (MQ=255) gCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTG‑AAAAAAAATTACAAAAAGTGCTGTCTGAACTGAACAAAAAAGAGCAAAGTTAGTAGCGCAGGGTACaga > 2:821609/1‑143 (MQ=255) gCCTTCTCTCGTAAGTAAGCAACATAACCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACaga < 2:594466/143‑1 (MQ=255) ccTTTTTTCGTAAGTAAGCAACAAAAGCAGTCACATACTATGATCGCTATTAGAAATTCCTATGCAACAACTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACagag < 2:196015/143‑1 (MQ=255) ttttttCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGt > 2:1287247/1‑143 (MQ=255) tttCGTAAGTAAGCAACTTAAGCTGTCACGGTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTG‑AAAAAAAATTACAAAAAGTGCTTTCTTAACTGAACAAAAAAGAGCAAAGTTAGTCTCGTAGGGTACAGAGGTAAg < 1:353856/143‑1 (MQ=255) tCGTAAGTAAGCAACATAAGCTGTCACGTATTGTGATGGCTATTAGAAATTCCAATGCAACAACTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGGTAGACGCGTGGGGTGCAGAGGTAAGAt > 1:462770/1‑143 (MQ=255) cgtatttaataaaCATAAGCTGTCAAGTTTTGTAATGGCGATTAAAAATTCCTATTCAACAACTG‑AAAAAAAAGTACAAAAAATACCTGCTGAACAGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATg < 2:1344202/132‑1 (MQ=255) gtaagtaaGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTCGTCGCGTAGGGTACAGAGGTAAGATGt > 2:949665/1‑143 (MQ=255) gtaagtaaGCAACATAAGCTGGCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGt < 2:970645/143‑1 (MQ=255) gaagtaagGAACATAAGCTGTGACGGTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTG‑AAAAAAAAGTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGtt < 1:916495/142‑1 (MQ=255) aagtaagCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTc < 2:713840/143‑1 (MQ=255) aagtaagCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAACGTAGTCGCGTCAGCCACCGAGGAAAGATGTTc > 1:157323/1‑143 (MQ=255) agtaagCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTG‑AAAAAAAATTACAAAATGTGCTTTCTGAACTGAACAAAAAAGGGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCt < 1:345760/143‑1 (MQ=255) gCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTG‑AAAAGAAGTTACAACAAGTGCTTTCTGAACTGAACACCAAAGCGCACAGTTGGTCGCGTAGGGTACAGCGGTGTGATGTTCtcgctt > 2:189462/1‑138 (MQ=255) gCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTCCtctcct > 2:184726/1‑141 (MQ=255) tAAGCTGCACCGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGAc < 1:776232/143‑1 (MQ=255) aaGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGAcc > 2:829433/1‑143 (MQ=255) cTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATTCAATAACTG‑AAAAAAAAGTACAAATAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCttt < 1:1085229/143‑1 (MQ=255) cTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACCGAGGTACGATGTTCTATCTTTCAGACCttt > 2:1132815/1‑143 (MQ=255) cTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCttt < 1:993568/143‑1 (MQ=255) cTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCttt < 2:401259/143‑1 (MQ=255) gTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTa < 1:350177/143‑1 (MQ=255) gTCACGTTATGAAGTGGCTATTAGAAATTCCTATGCAAAAACTG‑AAAAAAAATGACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTa < 1:974250/143‑1 (MQ=255) tCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTGAc > 1:1313516/1‑143 (MQ=255) cACGTATTGTGATGGCTATGAGAAATTCCGAGGCAACAACTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCCAAGGTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACt < 2:1354330/143‑1 (MQ=255) cggtgtgggATGGCGATTAGAAGTTCGGATGCAACAGGTG‑AAAAAAAATTACAAAAAGTGCTGGCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTc < 1:924391/135‑1 (MQ=255) cGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTc < 1:311825/143‑1 (MQ=255) ttttGTGATGGCTATTAGAAATTCCTATGCAACAACTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCAc < 1:217780/143‑1 (MQ=255) tttGTGATGGCTATTAGAAATTCCTATGCAACAACTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACg < 1:193396/143‑1 (MQ=255) tttGTGATGGCTATTAGAAATTCCTATGCAACAACTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACg > 1:586115/1‑143 (MQ=255) ttGTGATGGCTATTAGACATTCCTATGAAACAACAG‑AAAAAAAATTACAAAAAGTGCCTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGt < 1:1296583/143‑1 (MQ=255) gtgATGGCTATTAGAAATTCCTATGCAACAACTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGAAAAGCGGTAAGACGTTCTATCTTTCAGACCTTTTACTTCACGTaa > 1:235316/1‑143 (MQ=255) tgATGGCTATTAGAAATTCCTATGCAACAACTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAAt < 1:829433/143‑1 (MQ=255) gCTATTAGAAATTCCTATGCAAAAAATG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGAt < 1:118411/143‑1 (MQ=255) tATTAGAAATTCCTATGCAACAACTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGAttt < 1:231224/143‑1 (MQ=255) ttAGAAATTCCTATGCAACAACTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTgg < 2:1329584/143‑1 (MQ=255) ccTATGCAACAACTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATAtt < 2:1309944/143‑1 (MQ=255) ccTATGCAACAACTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATAtt < 2:1309724/143‑1 (MQ=255) cgaTGCAACAACTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATAttt < 1:1297857/141‑1 (MQ=255) gCAACAACTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTCAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCCGACCTTTTACTTCACGCAATCGGATTTCGCTCAATATTTTAgc > 1:846355/1‑143 (MQ=255) caacgaCTG‑AAAAAAAATTACAAAAAGTGCTTGCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAgcc < 1:322017/143‑1 (MQ=255) caacaaCTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCCCGTAATCGGATTTGGCTGCATATTTTAgcc > 2:1307942/1‑143 (MQ=255) aacaacTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAgccg > 2:932385/1‑143 (MQ=255) aacTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGccc > 1:593557/1‑143 (MQ=255) aacTG‑AAAAAAAAGTACAAGAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGccc < 1:1202584/143‑1 (MQ=255) tG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATATTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATACTTTAGCCGCCCcag > 1:750472/1‑143 (MQ=255) aaaaaaaTTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCcagtca < 2:715366/143‑1 (MQ=255) aaaaaaaTTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCcagtca > 2:825045/1‑143 (MQ=255) aaaaaaTTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATTTTAAACACCCCCCACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCcagtcag > 2:329596/1‑143 (MQ=255) aaaaaaTTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCcagtcag > 2:340133/1‑143 (MQ=255) aaaaTTACGAAAAGTTCTGTCCGAACTGAACAAAAAAGAGCAAAGTTAGACGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTCATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTa < 1:84034/143‑1 (MQ=255) aaaTTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTaa < 2:1260918/143‑1 (MQ=255) ttACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGa < 2:352675/143‑1 (MQ=255) ccataattGCGTTCTGAACTGAACAAAACACAGCAGAGTTAGTCGCGCAGGGTACAGAGGTATGATGTTCTATCTTTCAGACCTTTTTCTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTg < 1:315858/136‑1 (MQ=255) cAAAAACTGCTTTCTGAAGTGAACAAAAAAGCGCAAACTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTg < 1:1249399/143‑1 (MQ=255) aaaaaGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTgg < 1:1185903/143‑1 (MQ=255) aaaaaGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTgg < 2:1313045/143‑1 (MQ=255) aaaaaGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTgg > 2:1004179/1‑143 (MQ=255) aagaGTGCTTTCTGAACGGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTggg < 1:994752/140‑1 (MQ=255) aaaGTGCTTTCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTgggg > 2:1178103/1‑143 (MQ=255) aaGTGCTTTCTGAACTGAACAAAAAATAGCAAAGTTAGGCGCGTAGGGTACAGAGGTAAGATGTTCTATCTGTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCATTACTGACTGGGGc < 1:941392/143‑1 (MQ=255) ttCTGAACTGAACAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGtttttt > 1:28832/1‑143 (MQ=255) aactgaacAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTgg < 1:149349/143‑1 (MQ=255) aactgaacAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTCTTTATTgg > 1:1044535/1‑143 (MQ=255) aactgaacAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGATTTTTAGTgg > 2:39741/1‑143 (MQ=255) aaatgaaaAAAAAAGAGTAAAGGTAGTCGCGTAGGGTACAGAGGTAAAATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTgg < 1:410957/140‑1 (MQ=255) cggaacAAAAAAGAGATAAGTTAGTCGCGTAGGGGACAGAGGTAAGATGTTCTATCTTGCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGc < 2:1201980/141‑1 (MQ=255) aacAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAACCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGGAATGACCGGGGCGTTTTTTATTTGGCgaa > 1:917571/1‑143 (MQ=255) acAAAAAAGAGCAAAGTTCGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTGCACGTAATCGGATGTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCgaaa < 1:1304266/143‑1 (MQ=255) cAAAAAAGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTCTATTGGGCgaaac > 1:736368/1‑142 (MQ=255) aaaGAGCAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGACCGAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGaaagaaaa > 2:265831/1‑143 (MQ=255) | CTAAGATTCGCCTGAACATGCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTG‑AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAA > NC_000913/4049748‑4050021 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |