| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,542,118 | A→G | 12.8% | R27R (AGA→AGG) | fimE → | tyrosine recombinase/inversion of on/off regulator of fimA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,542,118 | 0 | A | G | 12.8% | 260.1 / 4.9 | 112 | R27R (AGA→AGG) | fimE | tyrosine recombinase/inversion of on/off regulator of fimA |
| Reads supporting (aligned to +/- strand): ref base A (47/46); new base G (13/3); total (63/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.91e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 112 total aligned reads displayed.
GATATTTTATTTTTGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTG‑AACTGCTTGATCTGCA‑TTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATT > NC_000913/4541885‑4542349 | gATATTTTATTTTTGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTTTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGa‑tta < 1:222248/239‑1 (MQ=255)gATATTTTATTTTTGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGa‑tta < 1:71804/239‑1 (MQ=255) ttttattttTGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTTTTAC‑GGGGCAAAGGGAGACCGAGA‑ATATTgg > 2:222248/1‑238 (MQ=255) aaTGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCCACGGGAGCCAGGGA‑TTATTGTCTTATTCTGTTGGCATAACg > 1:36028/1‑238 (MQ=255) tGTAATTGACTTATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCa < 1:994828/239‑1 (MQ=255) tGTAATTGACTGATAGCCAAATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCa < 1:1223536/239‑1 (MQ=255) atttgtataagagacagacaTCCCTCCGTGGTGGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATGGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCa < 2:512913/221‑1 (MQ=255) agtGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGATGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATggg < 1:842421/237‑1 (MQ=255) aTTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTTGTAC‑GGGGCAACGGGAGCCAGGAG‑TTATTGTCTTATTCTGTTTGCATATCGGCATggg > 1:1228631/1‑239 (MQ=255) aTTGACTGATAGCCAAATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATggg < 1:382860/239‑1 (MQ=255) ttGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGCTTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTTTTACGGGGGCAACGGGA‑CCAAGGA‑TTATTGTCTTTTTTCGTTgggccatgtctcttaaa > 2:1212625/1‑224 (MQ=255) ttGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTTTTAC‑AGGGGAACGGGAGCCAGCGG‑ATATTTTTTTTTTTTTGTGGCAAATCGGccagggg > 2:1223536/1‑233 (MQ=255) aTAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTAAGGCCATGATGCAGGCGGTTTGTTAC‑CGGGCAACGGGGCGCAGAGA‑ATATTTTCTTTATCTGTTGGCATATCCGCATGGGGTGCGGAt > 1:96858/1‑239 (MQ=255) acttCACTTCGTTTTTGGTTATTTTTTTATCTATTGGGCTAATTTTTACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTG‑a < 2:119989/236‑1 (MQ=255) acaTCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTATTTTTCTTTTGGAGTATTTGCATGGGGTGCGGAGTA‑GTG‑a > 2:37572/1‑239 (MQ=255) ctcTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTG‑AACTg < 1:37572/237‑1 (MQ=255) cACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGCGCCAGAGG‑TTATTGTCTTTTTCTGTTTGGAATTTGGCCTTGGAATCGTATTA‑GTG‑CAca > 1:1189984/1‑237 (MQ=255) cTCCGTGTGTTGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAAGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTAAGGCCCTGATGCAGGCGGGTTGTTAC‑AGGGGAAAGGGAGACAGAGA‑TTCTTTTGTTTTTCTGTTGGCATTACGGccaggggagcggaataattaaac > 2:45835/1‑214 (MQ=255) tCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGGATTA‑GTG‑AACtcgtt > 1:206516/1‑235 (MQ=255) tgtgttGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGa‑tta < 2:361256/183‑1 (MQ=255) tgtgtgGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGa‑tta > 1:361256/1‑183 (MQ=255) tgtgtgGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAAGGA‑TTTTTGTGTTATTCTGTTTGCATAACGGCATGGGGTGCggacttactcttatacaaca > 1:512913/1‑219 (MQ=255) tgtgtgGTTATCTTTGTATCTATTGGGCTAATTTTGACCGATTGAGGTTACGTATAGGTATTCATTCAAAT‑ATATCTCAGGTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGAAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTAtt < 1:649135/223‑1 (MQ=255) gtgtgGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑GTATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAA‑GGGGGAAAGGGAGCCA‑AGAGTTATTGTCTTTTTTTTTTGGCATAACCGCATGGGGTGGGTATTT‑GAG‑AACTGTTTTAttt > 2:522391/1‑237 (MQ=255) tgGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTTTCTTATTTTGTTGGCATATCGGCATGGGATGCGTATTA‑GTG‑AACTGCTTGATTTGCa > 1:347256/1‑239 (MQ=255) tgtttacTTTTTTACTATTGGGTTAAATTTTGCCGGTTGGAGTTTCCCAAAGGGTTTCCATCAAAT‑ATATCTCAGTTAGGAATTCTTCTATTTGGAATAAACGGCGGTTTCTTACCGGTAAAGAAGGTCAGGGCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTG‑AACTGCTTGATCTGCa < 1:906591/232‑1 (MQ=255) gTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTTTTAC‑CGGGGAAAGGGAGCCACGGG‑TTATTTGCTTTTTTTGTTGGCCAATCGGGATGGGGGGGGTATTA‑ATG‑GAATGCTTTATTTGCA‑tt > 2:65800/1‑239 (MQ=255) tCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑TTG‑AACTGCTTGATCTTCA‑TTATCa > 1:1054498/1‑239 (MQ=255) aTCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCa < 2:358805/193‑1 (MQ=255) ggCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTG‑AACTGCTTGATCTGCA‑TTATc < 1:1094895/223‑1 (MQ=255) ttAATTTTGCCCGATTGAGGTTTCCTTTAGGTATTCATTCAAAT‑ATATCCCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTG‑AACTGCTTGATCTGCA‑TTATCAGGACCTTGACCTTAAt < 2:36028/237‑1 (MQ=255) tAATTTTGACCGATTGGGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGa‑tta < 2:1077053/155‑1 (MQ=255) tAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGa‑tta > 1:1077053/1‑155 (MQ=255) aTTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGTTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGGCACGGGACGCCGAGA‑TTATTGTCTTTTTCTTGTGGCAGAACGGCATTGGAGGCGTATTA‑TTG‑AACTTCTTGTTTTGCA‑TTATCAAGAACCTTACCCTTATGAAg > 2:941130/1‑239 (MQ=255) tttttaagaggcagggTTTCCTATAGGTTTTCATTCAAAT‑ATATCTCAGTTAAGAGGACTACTATTGGGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTG‑AACTGCTTGATCTGCA‑TTATCAGGACCTTGACCTTAATGAAgg < 2:1003969/225‑1 (MQ=255) gACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGGATGGGATGCGTCTTA‑GTG‑AACTGCTTGATCTGCA‑TTATCAGGACCTTGACCTTAATGAAGGgaga > 1:731353/1‑239 (MQ=255) gACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAA‑GGGGCAACGGGGGCCCGGGA‑TTATTGTCTTATTCTTTTGGCATATTGGCATGGGATGCGGATTA‑GTGAAACTGTTTGTTTTGC‑‑TTTTCCGggccttgacctttctttttaacac > 2:1094895/1‑227 (MQ=255) tCCTATAGGTATTCATTCACAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCCAAGGGAGCCAGAGG‑TTTTTGTCTTATTTTTTTGGCCTATCGGGACGTGATGAGCGTTT‑GTT‑GACTTCTTTTACTGCA‑TTGTCAGGACCCTGTCCTTTATGAAGGGAGAAAAAAAAtttccca > 2:1190328/1‑234 (MQ=255) ccTATAGGTATTCATTCAAAT‑ATATCGCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTG‑AACTGCTTGATCTGCA‑TTATCAGGACCTTGACCTTAATGAAGGt < 1:673227/221‑1 (MQ=255) cTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTG‑a < 1:793980/177‑1 (MQ=255) ggTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAAAGGGAGCCCGGGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGCTGCGTGTTA‑GTG‑AACTGCTTGATTTGCC‑TTATCAGGACCTTGACCTTAATGCGAGTAGaataaaaactgtttctttttaa > 1:1003969/1‑223 (MQ=255) tttaattcaAATAATATC‑CGGTTAGGAGTACTACTATTGTGAGTAAACGGTGTTATCTTAACGGTAAAGAAGGTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTG‑AACTGCTTGATCTGCA‑TTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAAc < 2:890959/235‑1 (MQ=255) attcattcAAAT‑ATATCTCAGTTAGGAGTACTACTAGTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTG‑AACTGCTTGATCTGCA‑TTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAAc < 1:97618/239‑1 (MQ=255) ttcattcaAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGa‑tta < 2:243648/123‑1 (MQ=255) ttcattcaAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTTGCATATCGGCATGGGATGCGGATTA‑GTT‑AAATGCTTGATCTTCA‑TTATCAGGCCCTTTGCCTTAATGAAGGGaaaaaaaaaaactttttcttaaacaaa > 2:673227/1‑219 (MQ=255) ttcattcaAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACCGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCCTATCGGCATGGGATGCGGATTA‑GTG‑AACTGCTTGATCTGCA‑TTATCAGGACCTTGACCTTAATGAAGGTAGGATAAATATTCGCCGCCTGAGGAACg > 1:62122/1‑239 (MQ=255) ttcattcaAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑AGGGCAACGGGAGCCAGAGa‑tta > 1:243648/1‑123 (MQ=255) cattcaAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTTTTAC‑CGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATTCGCATGGGATGGGTATTA‑GTG‑AACTGCTTGATCTGCA‑TTATACGGACCTTGACCTTAATGGAGGTAGAATAAATATTCTCCGACTGAAGAACGGa > 1:890959/1‑239 (MQ=255) cattcaAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCCACGGGAGCCAGCGG‑TTATAGTCTTATTTTGTTGGCATATCGGCATGGGGAACGTCTTA‑GTG‑AAATCCTTGGTCTCCA‑TTATAGGGACCTTGTCCTTATATAAGGAGGAATAAAAATTCTCCGCCTGAAAAAAggg > 2:1366012/1‑238 (MQ=255) tcaAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCg < 2:135521/154‑1 (MQ=255) tcaAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCg > 1:135521/1‑154 (MQ=255) aaaT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCCTATTCTGTTGGCATATCGGCCTGGGATGCGGATTA‑GTG‑AACTGCCTGGTCCGCA‑TTTTTAGGACCCTGACCTTTATGAGTGTAAAATAAATATTCGCCGCCTGAAGAAAGGAttttt > 2:265015/1‑238 (MQ=255) atCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑CGGGCAACGGGAGCCAGAGA‑TTATTTTCTTATTCTTTTGGCCTATCGGCATGGGATGCGTATTA‑GTG‑AACTCCTTGATCTGCA‑TTATCCGGACCTTGACCTTAATGAAGGTAGAATAAAAATTCGCCGCCTTAAGAACGGATTTTCTACCGt > 1:1263169/1‑239 (MQ=255) gTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCAATGGATGCGGATTATGTG‑‑ACTGTTTGATCTGCA‑TTATTAGGAACTTGAACTTAATAGAGGGAGAATAAAAAATTGCCAGCCGAAAAAAGGATTTTTTACCATTccacc > 2:598587/1‑235 (MQ=255) aGGGGTTCTACTTTTTTTAGTAAACGGTGTTATCTTACCGGTAAAGAAGTTCAGGCCATGGTGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTG‑AACTGCTTGATCTGCA‑TTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGtt < 2:206516/239‑1 (MQ=255) actactATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGGCACGGGAGCCCGAGA‑TTATTGTCTTATTCTTTTGGGATATTGGCATCGGGAGCGGATTT‑GTT‑GCATGCTTGATCTGCA‑TTTTCCGGACCTTTACCTTACTGGAGGTAGAATAAATATTCGCCGACTGAAGAAACGGTTTTCTACCGTTTACCCATTACGttt > 2:987066/1‑239 (MQ=255) actactATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGGGCCAGAGA‑TTATTGTCTTATTCTGTTGGCAAATCGGCATGGGGTGCGTATTA‑GTG‑AACTTCTTTATCTGCA‑TTATCAGGACCTTGACCTTAATGAAGGTGGAATAAATATTCGCCGACTGGAGAACGGATTTTTTACCGTTCACCCGTTAAGttt > 1:1285517/1‑239 (MQ=255) actactATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTTTGTTTGCATATCGGCATGGGGTGCGGATTA‑GTG‑AACTGCTTGATCTGCA‑TTTTCCAGACCTTGACCTTAATGAAGGGAGAATAAATATTCCCCCCCTGAAGAAAGGATTTTTTCCCGTTCCCCCCTTTCtttt > 2:828190/1‑239 (MQ=255) tactaTTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGGATTA‑GTG‑AACTGCTTGATCTGCA‑TTATCAGGACCTTGACCTTAATGAAGGGAGAATAAATATTCGCCGCCTGAAGAACGGGTTTTTTTCCGTTTAccccgtcagttttg > 1:1147543/1‑228 (MQ=255) tactaTTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCCGCATGGGGTTGGTATTT‑ATG‑AACTGCTTGATTTGCC‑TTATTAGGGCCTTGAACTTTATGAAGGCATAATAAATATTCGCCCCATGAAAAACGGCATTTTTACCCTTCTCCCCTTACGTTTtg > 2:73485/1‑239 (MQ=255) ctaTTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGGGCCCGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTG‑GACTCCTTGATCTGCA‑TTATCAGGACCTTGACCTTAATTAAGGTAGAATAAATATTTCCCCACCAAAAAAAGGATTTTTTACCGtttaaccctaaaggttttga > 2:591120/1‑221 (MQ=255) aGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTTTTAC‑TGGGCAACGGGAGCCAGAGA‑TTATTGGCTTATTCTTTTGGCCTATCGGCATGGGTTGCGGATTA‑GTG‑AACTGCTTGATCTGCA‑TTATCAGGACCTTGACCTTAATGAAAGTAGAATAAAATTTCGCCGCCTTAAGAACGGATTTTTTACCGTTTACCCTTTACGTTTTGATTAGCGTGa > 1:1235648/1‑239 (MQ=255) aGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTG‑AACTGCTTGATCTGCA‑TTATCAGGACCTTGACCTTAATGAAGGTAGAATAAAAATTTGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGCTACGTTTTGATGAGCGTGa > 1:315545/1‑239 (MQ=255) aGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTG‑AACTGCTTGATCTGCA‑TTATCAGGACCTTGACCTTAATGAAGGTAGAATAAAAATTCGCCGCCTGAGAAACGGGTTTTCTACCGTTCACCCGTTAAGTTTtgatgacgcgga > 1:87400/1‑233 (MQ=255) aGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGGATTA‑GTG‑AACTGCTTGATCTGCC‑TTATTAGGGCCTTTGCCTTAATTAAGGGAGAAAAAATATTTTCCGACTGAAAAACGGATTTTCTACCGTTCCTCCGGTACGGTTTGATTAggggta > 1:844908/1‑234 (MQ=255) aGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGGATTA‑GTG‑AACTGCTTGATCTGCA‑TTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTTACCCGGTACGTTTTGATTAGccgta > 1:359016/1‑235 (MQ=255) aGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAAAGGGAGCCAAGGA‑TTATTGGCTTATTCTGTTGGTATATGGGGCAGGGATGGGGATTA‑GGG‑AACTTCTTTGACTGCA‑TTATCAGGACCCTGACCTTAATAAAGGGTGAATAAATATTCCCCGACTGAAGAACGGATTTTTTACGGGTGAACCGTTACGATTTTATGAGCGTGa > 1:946326/1‑239 (MQ=255) aGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGAAAAGGGAACCAGAGA‑TTGTTGTCTTATTTTTTTGGCACATTGGCTCGGGATCCGTAATA‑GGG‑AACTGCCTGATCTGCC‑TTATCCGGTGCTTTGCCTTTAAGAAGGGAGAAGAAATTTTCAACGGATTAAGAACAGATTTGGTTCCGTTCCCCCGTTTCGTTTTTATTGGCGTGa > 1:60751/1‑239 (MQ=255) tAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGGGCCAGAGA‑TTATTGTCTTATTCTTTTGGCATATCGGCATGGGATGCGTATTA‑GTG‑GACTGCTTGATCTGCA‑TTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTTGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGGGaa > 1:131850/1‑238 (MQ=255) aCGTTGTTTTCTTACAGGTAAAGAAGTTCAGGGCATGATGTCGGCGGTTTGTTGC‑GGGGCACAGGGAGCCAGGGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTG‑AACTGCTTGATCTGCA‑TTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCg < 2:1235648/239‑1 (MQ=255) aCGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAAAGGGAGCCAGAGC‑TTATTGTCTTATTCTTTTGGCATATCGGCATGGGGGGCGTATTA‑GTG‑AAATGCTTGTTTTGCC‑TTTTCAGGGCCTTGACCTTAATGAAGGGAGAAAAAAAATTTGCCCACTGAGGAAAGGATTTTTTACCGTTTCCCCCCTAAGTTTtgttagagggaaaaacg > 2:479103/1‑224 (MQ=255) tcgtTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTG‑AACTGCTTGATCTGCA‑TTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTTGCCGACTGGAGAACGGATTTTTTAACGTTTACCCCTTACGTTTTGATAGGGCTGAAGCCgggg > 1:83511/1‑239 (MQ=255) tagcctACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTG‑AACTGCTTGAGCTGCA‑TTATCAGGACCTTGACCTTAAGGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACg < 1:987066/234‑1 (MQ=255) tATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGGGA‑GTATTGTCTTATTCTGTTGGCCTATCGGCATGGGATGCGTATTA‑GGG‑AACTGCTTGGTCTGCA‑TTATCAGGACCTTGACCTTAAAGAAGGAGGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTAGCTTTTGATGTGGGTGAAGACGTGGGAc > 1:55767/1‑238 (MQ=255) tttttACCGGTTAAGGAGTTCAGGCCATTATTCAGGCGGTTTTTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTAGTA‑GTG‑AACTGCTTGATCTGCA‑TTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGc < 2:1285517/236‑1 (MQ=255) tCTTACGGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTG‑AACTGCTTGATCTGCA‑TTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCt < 1:1167482/239‑1 (MQ=255) tCTTACCGGTAAAGAATTTTAGGCCATGGGGGAGGGTGTTTGTTAC‑GGGGCAACGGGGGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTG‑AACTGCTTGATCTGCA‑TTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCt < 2:55767/239‑1 (MQ=255) aCCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACTGGGGCAA‑GGGAGCCAGAGA‑TTTTTGTCTTATTTTTTTGGCATTACGGCATGGGAGGCGGGTTT‑TGG‑AACCGCTTTGTTTGCATTTTTCAGACCTTTGACTTTATGGAGGGAAGAATAAAATTTCGCCCCTTAGAAAAGGGATTTTTTCCCGTTCCCCCGACACGTTTTGTTGA‑CGCGAAGcccggggaaacgtga > 2:26094/1‑225 (MQ=255) ccGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGGTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTG‑AACTGCTTGATCTGCA‑TTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGAcc < 1:65800/239‑1 (MQ=255) aaaGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTG‑AACTGCTTGAt < 2:910778/114‑1 (MQ=255) tttaGGCCATGTTGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGT‑TTATTGTCTTATTCTGTTGTCATATCGGCATGGGATGCGTATTA‑GTG‑AACTGCTTGATCTGCA‑TTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCt < 2:60751/236‑1 (MQ=255) ttaGGCCATGATGCGGGCTGTTTGGTCC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCAAATCGGCATGGGATGCTTATTA‑GTG‑AACTGCTTGATCTGCA‑TTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCt < 2:731353/236‑1 (MQ=255) tCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTG‑AACTGCTTGATCTGCA‑TTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCt < 1:828190/238‑1 (MQ=255) cAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGGGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCg > 2:420156/1‑86 (MQ=255) cAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCg < 1:420156/86‑1 (MQ=255) cAGGCCATGACGCAGGCGGTTTGTTTC‑GGGGAAAAGGGGGCCAGAGA‑TTATTGTCTTATTCTTGTGGCATATCGGCATGGGATGCGTATTA‑GTG‑AACTGCTTGATCTGCA‑TTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTaa < 2:1263169/239‑1 (MQ=255) gCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTG‑AACTGCTTGATCTGCA‑TTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAAc < 1:21809/229‑1 (MQ=255) cATGAGGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTG‑AACTGCTTGATCTGCA‑TTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGa < 1:591120/239‑1 (MQ=255) atgatgCAGGCGGGTTGGTAC‑GGGGCAACGGGAGGCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTG‑AACTGCTTGATCTGCA‑TTAACAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGaa < 1:265015/239‑1 (MQ=255) gatgCAGGCGGTTTGTTAC‑GGGGCAACGGGATCACGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGGGTATTA‑GTG‑AACTGCTTGATCTGCA‑TTATCAAGAACTTGACCCTTATGAAGGGAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTAAGATTTGATGACAGTTTACCCGGGGGATGCTGGTCCCCGGAACGTGCTAACTGGaagg > 1:1036248/1‑237 (MQ=255) gctggtgtttttttGC‑GGGGCAACGGGAGCCAGAGA‑TTATTTTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTG‑AACTGCTTGATCTGCA‑TTATCAGGACCTCGACCTTAATGAAGGTAGAATAAATAGTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGgcg < 2:96858/231‑1 (MQ=255) aGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTTGCATATCGGCATGGGGTGCGTATTA‑GTG‑AACTGCTTGATCTGCA‑TTATCAGGACCTTTACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGGTTTTTTACCCTTCACCCCTTACGTTTTGATTAGCGGGAAACCGTGGAAACCTGGCCCCCGGaaacggccaacaggccgtctttt > 2:21809/1‑218 (MQ=255) gCGGTTTGTTAC‑GGGGCAACGGGAGCCCGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGGATTA‑GGG‑AAATCCTTGATCTGCA‑TTTTCAGGGCCTTGGACTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCCCCCCGTACGTTTTGTTGAGCGTGAAGCCGTGGTATCATGGACCCCGGAAAGTGGTAATTGGAAAgggggggg > 2:836071/1‑233 (MQ=255) tttttGTTAC‑GGGGCAGTGGGATCCGGGGA‑TTATTTTTTTATTCTGGTGGCATATCGGCATGGGATGCGTATTA‑GTG‑AACTGCTTGATCTGCA‑TTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATAGTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGAc < 2:1189984/236‑1 (MQ=255) gTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTG‑AACTGCTTGATCTGCA‑TTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACt < 1:1249399/239‑1 (MQ=255) agggggCAACGGGAACCAAGTA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATTCGTATTA‑GGG‑AACTGCTTGATCTGCA‑TTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGAc < 1:723943/237‑1 (MQ=255) ggggCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTG‑AACTGCTTGATCTGCA‑TTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGc < 1:26094/239‑1 (MQ=255) cAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTG‑AACTGCTTGATCTGCA‑TTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCTTGGAACGCTGGACCCAGGAACGTGCTAAATGGAAAGGCGCTGACCGGACTGACGCtata > 2:1000445/1‑239 (MQ=255) cGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTG‑AACTGCTTGATCTGCA‑TTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGGGCTAACTGGAAAGGCGCTGCCCGGACTGACGCTAtattt > 1:1089259/1‑239 (MQ=255) gCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTG‑AACTGCTTGATCTGCT‑TTATCAGGACCTTGACCTTAATGAAGGTAGAATAACTATTCGCCGCCTGACGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGTGCGGGAACCCGCGGAACGCGGGACCCAGAAACGTGCTAACCGGAAAGGCGCTGACCGGAATGCCGccaacttcatt > 2:924739/1‑227 (MQ=255) | GATATTTTATTTTTGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAC‑GGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTG‑AACTGCTTGATCTGCA‑TTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATT > NC_000913/4541885‑4542349 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |