| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,511,426 | G→C | 15.8% | intergenic (+101/+40) | ypeC → / ← mntH | DUF2502 family putative periplasmic protein/manganese/divalent cation transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,511,426 | 0 | G | C | 15.8% | 125.6 / 2.8 | 60 | intergenic (+101/+40) | ypeC/mntH | DUF2502 family putative periplasmic protein/manganese/divalent cation transporter |
| Reads supporting (aligned to +/- strand): ref base G (31/18); new base C (4/7); total (35/25) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTTGGTGGCGTCATGATAATGGCTACCACCGTGGCTGGGATAAGCGTAAAGCGTATGAGCGTGGCTATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGG‑GTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATG‑CCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTA‑GGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGTTCACCAGATCGCCCATCAACTTGCTGTCACTGGTGAAAATCAGCAGTGGAACCAGCGCCAGAGCGATACCAAAACTTAACAGTACCTGACTCATAAC > NC_000913/2511192‑2511657 | gTTGGTGGCGTCATGATAATGGCTACCACCGTGGCTGGGATAAGCGTAAAGCGTATGAGCGTGGCTATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGG‑GTCATGGGCCCCGCCATTAAACGCGTCCGCCAATGGAGCACAATG‑CCTGTTGCGCCCCTGGTGCGTCTTATCAGGCCCACCAACCGGCCCTTTAACCATGA‑GGGGGGGACAGGGGTTTAcgcccc > 2:1088431/1‑237 (MQ=255) ccaccGTGGCTGGGATAAGCGTAAAGCGTATGAGCGTGGCTATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGG‑GTCATGGGGACCGCCATTAAACGCGCCCCCCAATGGAGCACAATG‑CCTGATGCGACGCTAGTACGTCTTTTCAGGCCTACAACACGGCTCTTGACATCTCA‑GGGCGGGTAAGCCGTTTACGCGGCaacaccacaaagccacacatgcaa > 2:101691/1‑215 (MQ=255) tGGCTGGGATAAGCGTAAAGCGTATGAGCGTGGCTATCGTGAATGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGG‑GTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATG‑CCTGATGCGACGCTAGTGCGCCTTATCAGGCCTACAAACCGGCCCTTTACCCCGCA‑TGGCGGATAAGGCGTTTACGCCCCATCCGCCAAAAGGGcaaaaaccgaggccaa > 2:387399/1‑223 (MQ=255) aTAAGCGTAAAGCGTATGAGCGTGGCCATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGG‑GTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCAAAATG‑CCTGATGCGAAGCTAGTGCGTCTTATCAGGCCTACACACCGGCGCTTTAACGCGTC‑GGGCGGATAATGCGTTTACGCCGGATCCGACAATAGGGCCaagagggaacctgattcaaatag > 2:77121/1‑217 (MQ=255) gcgtaaagcgtaTGAGCGTGGCTATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGG‑GTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATG‑CCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTA‑GGGCGGCTAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACaaa > 1:463418/1‑237 (MQ=255) gaaaagcttaggggcggtgttATGGTGAAGGGGGGGGCGAACGTGACGATCATCGGGGAAAGGCCGGGG‑GTAAGGGGACCCGCCTTTAACCGCGTCCGCCAATGGAGCACAATG‑CCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTA‑GGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATcc < 1:682170/218‑1 (MQ=255) aaagcgtaTGAGCGTGGCTATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGG‑GTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATG‑CCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTA‑GGGCGGATAAGGCGTTTACCCCGAATCCGCCAATATGGCCAAATGGGACCCCAATTCACCAAAAACCCCa > 2:916877/1‑238 (MQ=255) aagcgtaTGAGCGTGGCTATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGG‑GTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATG‑CCTGATGCGACGCTAGTGCGTCTTATCAGGCTTCCAAACCGGCCCTTTAACGCGTA‑GGGCGGTTAAGGCGTTTACCCCGACTCACCCCATAATGCCAAATGAGACGCCCATTCAACT‑CAAACCCaaa > 2:483096/1‑236 (MQ=255) taTGAGCGTGGCTATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGG‑GTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATG‑CCTGATGCGACGCTAGTGCGTCTTATCAGGCCTAAAACCCGGCTCTTTAACGCGTA‑GGGCGGTTCAGGCGTTTACCCCGCATCCGCCAATAATGCCAGATGGGACGCCAATCCCACTACAAACCCAGCCCCg > 2:284933/1‑238 (MQ=255) taTGAGCGTGGCTATCGTGAAGCCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGG‑GTCATGGGCCCCGCCATTAAACGCGTCCGCCAATGGAGCACAATG‑CCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTACCGCGTA‑GGGCGGCTAAGGGGTTTACCCCCCATCCGCCCCCAGTACCAGATACGACCCCCACTCAAATACAACCCCACCCCCg > 2:566754/1‑238 (MQ=255) gggcggggtgttgggggaggggtGGCGCGCTGGTGAAGATCAGCG‑GGAAAAGGCCGGGTGTCTGGGACACCGCCATTAAACGCGTCCGCCAATGGAGCACAATG‑CCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTA‑GGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTcc < 1:2906/217‑1 (MQ=255) aaGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGG‑GTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATG‑CCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTA‑GGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATACGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGata > 1:141089/1‑239 (MQ=255) tCGTGACGATCATCGCGGAAAAGGCCGGG‑GTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATG‑CCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTA‑GGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCCACAACCAGACATTCAGCCCCACg > 1:420912/1‑238 (MQ=255) gACGATCATCGCGGAAAAGGCCGGG‑GTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATG‑CCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTA‑GGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAAATGCGACGCCCATTCAACTACAATCCCAGCCCCCTCCCCCCCAAAAACCAGATATTCACCCCCCCAACCac > 2:833389/1‑238 (MQ=255) catcGCGGAAAAGGCCGGG‑GTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATG‑CCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTA‑GGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCACCGCCGTCCCCACCAACCACCAAGTATTCAGCGCCACGACCAGcaccac > 1:67011/1‑239 (MQ=255) atcGCGGAAAAGGCCGGG‑GTCATGGGCCCCGCCATTAAACGCATCCGCCAATGGAGCACAATG‑CCTGATGCGACGCTAGGGCGTCTTATCAGGCATACAAACCGGCTCTTTAAAGCGTA‑GGTCGGTTAAGGCGTTTACGCCGCATCCCCAAATAGTGCCAGAAGCGACACTCCTTCAACTACAATCCCACCGCCAGCCCCACACAAAACCAGATATT‑AGCGcccccgaccaaacccaca > 2:665955/1‑223 (MQ=255) tcGCGGAAAAGGCCGGG‑GTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATG‑CCTGATGCAACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTA‑GGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTCCCATCCCACCGCCGTCCCCCCCAAAAACCAGAAATTCCACCCCACCACCAGcacccaaa > 2:412690/1‑235 (MQ=255) g‑gTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATG‑CCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTA‑GGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCCCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCCCGACCAGCACCACAAACACCCAAcccg > 2:25156/1‑233 (MQ=255) aTGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATG‑CCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTA‑GGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCCCCAACAACCAGATATTCAGCCCCCCGCCCAGCCCCAAAAACACCCACCCTGACTGttt > 2:472046/1‑238 (MQ=255) tGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATG‑CCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAGCGCGTA‑GGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCACCGCCGTCCCCCCCAACAACCCGCTATTCAACGCCACGACCAGCCCCCAAACCacccaccccgctcgtttt > 2:84247/1‑228 (MQ=255) tGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATG‑CCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTA‑GGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGtttt > 1:1033052/1‑238 (MQ=255) ccGCCATTAAACGCGTCCGCCAATGGAGCACAATG‑CCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTA‑GGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCCCCAACAACCAGATATTCAGCGCCACGACCAGAACCAAAATCACCCAACCCGTCTGTTTTACACGtt > 2:471775/1‑239 (MQ=255) cGCCCTTAAACCCTGCCCCCCATTGGGCACAATGCCCTGTGGCGACGATGGGGTGTTTTACCGGGCCTCAAAACCGGCTCTTTAACGCGTG‑GGGCGGATAAGGCGTTTCCGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGtt < 2:530312/239‑1 (MQ=255) cGCCATTAAACGCGTCCGCCAATGGAGCACAATG‑CCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTA‑GGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGCCGCTCATTCAACTACAATCCCAGCGCCGCCCCCACCAACACCCAGATATTCAgcg > 1:236127/1‑193 (MQ=255) cGCCATTAAACGCGTCCGCCAATGGAGCACAATG‑CCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTA‑GGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGTAATTCAGCCCCACGACCACCACCCCAACACCCCCCCCTGCCTGTTTTACGCGtt > 2:933023/1‑238 (MQ=255) cGCCATTAAACGCGTCCGCCAATGGAGCACAATG‑CCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTA‑GGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCACGACCAGCACCCCAATCCCCAAGCCCGCCTGTTTTACGCGctt > 1:530312/1‑239 (MQ=255) cGCCATTAAACGCGTCCGCCAATGGAGCACAATG‑CCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTA‑GGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCCCCGTCCCCCCCAACAACCAGATATTCAGCGCCCCCCCCACCACCCCAATCACCCCCCCCTTCTTTTTTACGCGttt > 2:553820/1‑239 (MQ=255) cattaaccggtcccGCCAATGGAACCAAATG‑CCTGATGCGACGTTAGTGGGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTA‑GGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCt < 1:868457/227‑1 (MQ=255) aaTTAAACGCGTCCCCCAATGGGACAAAATG‑CCTGATGGGACGCGAGTGCGTCTTACCAGGCCTAAAAACCGGCTCTTTAACGCGTA‑GGGCGGAAAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCt < 1:42403/238‑1 (MQ=255) tAAACGGCTCCGCCAATGGAGCACAATG‑CCTGATGCGACGTTGGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTA‑GGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGtt < 1:843012/239‑1 (MQ=255) cccGCAAATGGAGCACAATG‑CCTGATGCGACGCTAGTGCGTCTTACCAGGCCTAAAAACCGGCTCTTTAACGCGTA‑GGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGTTCACCAGAt < 1:25156/238‑1 (MQ=255) ccGCCAATGGAGCACAATG‑CCTGATGCGACGCTAGGGCGTCTTATCAGGCCTATAAACCGGCTCTTTAACGCGTA‑GGGCGGATAAGGCGGTTACGCCGAATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGTTCACCAGAt < 1:3342/238‑1 (MQ=255) aaTGGAGCACAAGT‑CCTGGTGCGGCGGTAGGGGGTTTTATCAGGCCTACAAACCGGCTCTTTAACGGGTG‑GGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGTTCACCAGATCGCCCa < 1:277668/239‑1 (MQ=255) cacaATG‑CCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTA‑GGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCCCCAACAACCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGTTCACCAGATCGCCCATCAACt > 1:846392/1‑238 (MQ=255) caATG‑CCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTA‑GGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGTTCACCAGATCGCCCATCAACtt > 1:260223/1‑237 (MQ=255) gATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTA‑GGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCAGTTTTACGCGTTTGCTGTTCACCAGACCGCCAATCAACTTGCTGTAACTg > 1:387861/1‑239 (MQ=255) aTGCGACGCTAGTGCGTTTTATCAGGCCTACAAACCGGCTCTTTAACGCGTA‑GGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACg < 2:113842/102‑1 (MQ=255) aTGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTA‑GGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACg > 1:113842/1‑102 (MQ=255) cGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTA‑GGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCACGACCAGCCCCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGTTCACCAAATCGCCCAACAACTTGCTGTAACTGGTGaaaa > 2:487868/1‑239 (MQ=255) tCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTA‑GGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGc > 1:789448/1‑166 (MQ=255) tCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTA‑GGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTTTTCCCCAGAACCCCCACCAACTTCCTGTCCCTGGTGAAAATcagaaggga > 2:669035/1‑236 (MQ=255) catggccatACAAACCGGCTCTTTAACCGGTG‑GGGCGATAAAGGGGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGTTCACCAGATCGCCCATCAACTTGCTGTCACTGGTGAAAATCAGCAGTGGAAcc < 2:941859/231‑1 (MQ=255) ccTACAAACCGGCTTTTTAACGGGTG‑GGGGGGAAAAGGCTTTTACGCCCCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAACCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGTTCACCAGATCGCCCATCAACTTGCTGTCACTGGTGAAAATCAGCAGTGGAACCAGCGcc < 2:1033052/239‑1 (MQ=255) aaaCCCGCCTTTTAAC‑CGTAGGGGCGGATAAGGCTTTACCCCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGTTCACCAGATCGCCCATCAACTTGCTGTCACTGGTGAAAATCAGCAGTGGAACCAGCGCCAGAGc < 1:471775/239‑1 (MQ=255) cGGCTCTTTAACGCGTA‑GGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCACGACCAGCACCACAATCACCAAGCCTGTCTGTTTTACGCGTTTGCTGTTCACCAGATCGCCCATCAACTTGCTGTCACTGGTGTAAATCAGCATCGGAACAAGAGCCAGAGCGAt > 1:595618/1‑238 (MQ=255) tttttAACGCGGA‑GGGCGGATAGGGCTTTTACGCCCCTTCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGTTCACCAGATCGCCCATCAACTTGCTGTCACTGGTGAAAATCAGCAGTGGAACCAGCGCCAGAGCGATACCa < 1:84247/236‑1 (MQ=255) tttAACCGGTA‑GGGGGGAAAAGCCGTTTACCCCCCACCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGTTCACCAGATCGCCCATCAACTTGCTGTCACTGGTGAAAATCAGCAGTGGAACCAGCGCCAGAGCGATACCaaaa < 1:472046/239‑1 (MQ=255) tAACGCGTA‑GGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGTTCACCAGATCGCCCATCAACTTGCTGTCACTGGTTAAAATCAGCAGTGGAACCAGCGCCAGAGCGTTACCacacct > 1:1069272/1‑234 (MQ=255) tacccagtgggggggATAAGGCTTTTACCCCGCATCCGCCAATAGTGCCGAATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCCCCAACAACCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGTTCACCAGATCGCCCATCAACTTGCTGTCACTGGTGAAAATCAGCAGTGGAACCAGCGCCAGAGCGATACCAAAACt < 2:420912/230‑1 (MQ=255) cgcgTA‑GGGCGGAAAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGTTCACCAGATCGCCCATCAACTTGCTGTCACTGGTGAAAATCAGCAGTGGAACCAGCGCCAGAGCGATACCAAAACTTaa < 1:833389/239‑1 (MQ=255) ccgtgggggCGGTTAGGGCTTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCACGACCAGCACCACAATCCCCCAGCCTGTCTGTTTTACGCGTTTGCTGTTCACCAGATCGCCCATCAACTTGCTGTCACTGGTGAAAATCAGCAGTGGAACCAGCGCCAGAGCGATACCAAAACTTaa < 2:1069272/233‑1 (MQ=255) gATATGCCGTTCACCCCGCTTCCTCCAAGTGGTCCAGATGCGACGCTCACTCACCTACAATCCCAGCGCCCGCCCCACCAACAACCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGTTCACCAGATCGCCCATCAACTTGCTGTCACTGGTGAAAATCAGCAGTGGAACCAGCGCCAGAGCGATACCAAAACTTAACAGTACCTGa < 1:323845/238‑1 (MQ=255) aTAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGTTCACCAGATCGCCCATCAACTTGCTGTCACTGGTGAAAATCAGCAGTGGAACCAGCGCCAGAGCGATACCAAAACTTAACAGTACCTGACt > 1:144849/1‑239 (MQ=255) aTAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGTTCACCAGATCGCCCATCAACTTGCTGTCACTGGTGAAAATCAGCAGTGGAACCAGCGCCAGAGCGATACCAAAAATTAACAATACCTGAc > 1:120144/1‑238 (MQ=255) agggCTTTTACGCCCCACCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCCCCAACAACCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGTTCACCAGATCGCCCATCAACTTGCTGTCACTGGTGAAAATCAGCAGTGGAACCAGCGCCAGAGCGATACCAAAACTGAACAGTACCTGACTCa < 1:4587/237‑1 (MQ=255) aagggctttACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGTTCACCAGATCGCCCATCAACTTGCTGTCACTGGTGAAAATCAGCAGTGGAACCAGCGCCAGAGCGATACCAAAACTTAACAGTACCTGACTCa < 1:933023/233‑1 (MQ=255) aaGGCTTTTACCCCGCATCCGCAAATAGTCCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGTTCACCAGATCGCCCATCAACTTGCTGTCACTGGTGAAAATCAGCAGTGGAACCAGCGCCAGAGCGATACCAAAACTTAACAGTACCTGACTCa < 1:566754/239‑1 (MQ=255) aaGGCCTTTCCCCCACATCCGCCAATAGTGCCAGATGCGACCCTCATTCAACTACAACCCCAGCGCCGTCCCCCCCAACAACCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGTTCACCAGATCGCCCATCAACTTGCTGTCACTGGTGAAAATCAGCAGTGGAACCAGCGCCAGAGCGATACCAAAACTTAACAGTACCTGACTCa < 1:989271/239‑1 (MQ=255) gTTTACCCCGGATCCCCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGGCTGTTTTACGCGTTTGCTGTTCACCAGATCGCCCATCAACTTGCTGTCACTGGTGAAAATCAGCAGTGGAACCAGCGCCAGAGCGATACCAAAACTTAACAGTACCTGACTCATAAc < 1:101691/238‑1 (MQ=255) tACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCACGACCAGCACcaca > 1:904233/1‑104 (MQ=255) tACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCACGACCAGCACcaca < 2:904233/104‑1 (MQ=255) | GTTGGTGGCGTCATGATAATGGCTACCACCGTGGCTGGGATAAGCGTAAAGCGTATGAGCGTGGCTATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGG‑GTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATG‑CCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTA‑GGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCACGACCAGCACCACAATCACCCAGCCTGTCTGTTTTACGCGTTTGCTGTTCACCAGATCGCCCATCAACTTGCTGTCACTGGTGAAAATCAGCAGTGGAACCAGCGCCAGAGCGATACCAAAACTTAACAGTACCTGACTCATAAC > NC_000913/2511192‑2511657 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |