| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 421,546 | G→T | 18.7% | L187L (CTG→CTT) | proY → | proline‑specific permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 421,546 | 0 | G | T | 18.7% | 112.7 / 3.0 | 64 | L187L (CTG→CTT) | proY | proline‑specific permease |
| Reads supporting (aligned to +/- strand): ref base G (23/28); new base T (10/3); total (33/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.16e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.71e-01 | |||||||||||
TATATGGGTGTCTGGTTCCCGACGGTGCCGCACTGGATTTGGGTACTGAGCGTGGTGCTGATCATTTGCGCCGTAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGGCGGGCAACCGACCGGTATTCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCATGGTAATGTC‑GTTGCAAATGGTGATGTTTGCTTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTGGTGTTCTACGTCGGTACGCTGTTCGTCATTATGTCTATCTACCCGTGGAATCAGGTTGGCACTGCCG > NC_000913/421322‑421784 | tataTGGGTGTCTGGTTCCCGACGGTGCCGCACTGGATTTGGGTACTGAGCGTGGTGCTGATCATTTGCGCCGTAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGGCGGGCAACCGACCCGTATTCATAAACTTGTGTGCAAcggcg > 1:6960/1‑238 (MQ=255) gggTGTCTGGTTCCCGACGGTGCCGCACTGGATTTGGGTACTGAGCGTGGTGCTGATCATTTGCGCCGTAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGCCATCATCATCTGGGGGATTGGCAACGGCGGGCCACCCACCGGGATTCATAACCCTTGGCGCAAagggggggttt > 2:586928/1‑234 (MQ=255) tgtCTGGTTCCCGACGGTGCCGCACTGGATTTGGGTACTGAGCGTGGTGCTGATCATTTGCGCCGTAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGGCGTGCAACCGCCCGGTGTTCCTAACCTTTGGGGCAAtcgcgggctctct > 1:304079/1‑231 (MQ=255) tgtCTGGTTCCCGACGGTGCCGCACTGGATTTGGGTACTGAGCGTGGTGCTGATCATTTGCGCCGTAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGGCGGGCAACCGACCGGTATTCTTAACCTGTGGGGCAACGGCGGCTTCTTCa > 1:726923/1‑239 (MQ=255) tgtCTGGTTCCCGACGGTGCCGCACTGGATTTGGGTACTGAGCGTGGTGCTGATCATTTGCGCCGTAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGGCGGGCAACCGACCGGGATTCATAACCTGTGGGGCAACGGCGGCttcttcg > 1:92261/1‑238 (MQ=255) tCTGGTTCCCGACGGTGCCGCACTGGATTTGGGTACTGAGCGTGGTGCTGATCATTTGCGCCGTAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGCTTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGGCGGGCAACCGACCGGGATTCTAAACCTGTGGGGAAACGGGGGgttcttacat > 1:1044978/1‑235 (MQ=255) tCTGGTTCCCGACGGTGCCGCACTGGATTTGGGTACTGAGCGTGGTGCTGATCATTTGCGCCGTAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGGCGGGGAACCGGCCGGAATTCATAACCCGGGGGGGCACGGGGGGTTTTTCAga > 2:378681/1‑238 (MQ=255) tCTGGTTCCCGACGGTGCCGCACTGGATTTGGGTACTGAGCGTGGTGCTGATCATTTGCGCCGTAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGGCGGGGAACCGACCGGGATTCAAAACCTTTGGGGGCACGGCGGCTTCTTCCGt > 1:667727/1‑239 (MQ=255) tCTGGTTCCCGACGGTGCCGCACTGGATTTGGGTACTGAGCGTGGTGCTGATCATTTGCGCCGTAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGGCGGGCAACCGACCGGTATTCATAACCTGTGGGGCAACGGCGGCTTCTTCAGt > 1:354837/1‑239 (MQ=255) tCTGGTTCCCGACGGTGCCGCACTGGATTTGGGTACTGAGCGTGGTGCTGATCATTTGCGCCGTAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGGCGGGCAACCGACCGGTATTCATAAACTTTGGAGGGACGGCGGCTTCTCCAgg > 1:350650/1‑238 (MQ=255) tCTGGTTCCCGACGGTGCCGCACTGGATTTGGGTACTGAGCGTGGTGCTGATCATTTGCGCCGTAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGGCGGGCAACCGACCGGGATTCTTAACCTGTGGAGCAAAGGCGGGCTCTCCAgg > 1:323468/1‑238 (MQ=255) tCTGGTTCCCGACGGTGCCGCACTGGATTTGGGTACTGAGCGTGGTGCTGATCATTTGCGCCGTAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGGCGGGCAACCGACCGGGATTCATAACCTGTGGAGCAACGGCGGGCTCTTCCGt > 1:30950/1‑239 (MQ=255) tCTGGTTCCCGACGGTGCCGCACTGGATTTGGGTACTGAGCGTGGTGCTGATCATTTGCGCCGTAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGCCAACGGCGGGAAACCGACCGGTATTCAGAACCTTTGGTGAACCGGCGCGTTCTTCCGt > 1:706530/1‑239 (MQ=255) tCTGGTTCCCGACGGTGCCGCACTGGATTTGGGTACTGAGCGTGGTGCTGATCATTTGCGCCGTAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGCTTCGGCTTCCTCATCTGGGGGGTTGGCAACGGCGGGGCACCGACCGGGATTCCTAACCCGTGGAGTAAcaggaggtttttcaca > 2:458941/1‑224 (MQ=255) tCTGGTTCCCGACGGTGCCGCACTGGATTTGGGTACTGAGCGTGGTGCTGATCATTTGCGCCGTAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCCCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGGCGGGCAACCGACCGGGATTCATAACCTGTGGAGCAAAGGGGGCTTCTTCAga > 2:543935/1‑238 (MQ=255) tCTGGTTCCCGACGGTGCCGCACTGGATTTGGGTACTGAGCGTGGTGCTGATCATTTGCGCCGTAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCACCATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGGCGGGCCACCGCCCGGTATTCATAACCTGGTGGGCAAAGGGGGGTTCTTCCGt > 1:89494/1‑239 (MQ=255) tCTGGTTCCCGACGGGGCCGCACTGGATTTGGGTACTGAGCGTGGTGCTGATCATTTGCGCCGCAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGCACACGCGTGGCAACCTCCCGGTATTCCAACACTTTGGCGCAACGGCGGGTTCTTCAGt > 1:1006224/1‑239 (MQ=255) tGGTTCCCGACGGTGCCGCACTGGATTTGGGTACTGAGCGTGGTGCTGATCATTTGCGCCGTAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGCCGGGCAACCGCCCGGCATTCATAACCTGTgggggaaacggggcgcttttgcgaa > 2:806031/1‑216 (MQ=255) cGACGGTTCCGCACTGGATTTGGGTACTGAGCGTGGTGCTGATCATTTGCGCCGTAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGGCGGGCAACCGACCGGTATTCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACggctgg < 1:586928/239‑1 (MQ=255) ggCCGCACTGGATTTGGGTACTGGGCGTGGGGCTGATCATTTGCGCCGTAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGGCGGGCAACCGACCGGTATTCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTgg < 2:726923/237‑1 (MQ=255) ccGCACTGGATTTGGGTACTGAGCGTGGTGCTGATCATTTGCGCCGTAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGGCGGGCAACCTCCCGGGATTTCAAACCCTTGGTGGACCGCGGGCCCCTTCAGGAAAGGCCGGCtttg > 1:538232/1‑234 (MQ=255) ccGCACGGGATTTGGGTACTGAGCGGGGTGCTGATCAGTTGCGCCGTAAACCTGATGAGCGGGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGGCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGGCGGGCAACCGACCGGTATTCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCa < 1:268314/238‑1 (MQ=255) tGGATTTGGGTGCTGAGCGTGGGGCTGATCATTTGCGCCGTAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGGCGGGCAACCGACCGGTATTCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCATGGTaa < 1:355854/238‑1 (MQ=255) gATGTGGGTACTGGGCGTGGGGCTGATTATTTGCGCCGTAAACCTTATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGGCGGGCAACCGACCGGTATTCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTgg < 1:776560/228‑1 (MQ=255) tACTGAGCGTGGTGCTGATCATTTGCGCCGTAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGGCGGGCAACCGACCGGTATTCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCATGGTAATGTC‑GTTGCa < 1:541945/238‑1 (MQ=255) cTGAGCGTGGTGCTGATCATTTGCGCCGTAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGGCGGGCAACCGACCGGTATTCCTAACCTTTGGGGCAACGGCGGCTTCTTCAGTAACGGCGGGCTTgcccggggatagtgcttgcgaaa > 1:126207/1‑217 (MQ=255) cTGAGCGTGGTGCTGATCATTTGCGCCGTAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGGCGGGCAACCGACCGGTATTCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCATGGGAATGTC‑GTTGCAAAt > 1:866138/1‑239 (MQ=255) tgCGTGTGGCTTATCATTTGGGCTGTAAACCTGATGGGCGTGAAGGTAGTCGGGGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGGTTGTCCCCGGTGTCGGCATCATCATCTGGGGGATTGGCAACGGCGGGCAACCGACCGGTATTCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCATGGTAATGTC‑GTTGCAAATGGt < 2:212111/238‑1 (MQ=255) aGCGTGGTGCTGATCATTTGCGCCGTAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGGCGGGCAACCGACCGGGATTCTAAACCTTTGGGGCAACGGCGGCGTCTTACGTAACCGTGGGcctggcctggggagtacggcaccaaaggg > 2:128581/1‑220 (MQ=255) aGCGTGGTGCTGATCATTTGCGCCGTAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGGCGGGCAACCGACCGGCATTCCTAACCTGGGGAGCAACGGGGGCGTCTTCAGGAACGGGCGGCTTTGccagggtggttcggtgcaccagtg > 2:840213/1‑216 (MQ=255) gttgcgtatctttttggcCGTAAACCTGATTAGTGGGAATGTTTTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATTATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGGCGGGCAACCGACCGGTATTCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCATGGTAATGTC‑GTTGCAAATGGTGATGt < 2:856716/223‑1 (MQ=255) gttcTGATCATTTGCGCCGTAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGGCGGGCAACCGACCGGTATTCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCATGGTAATGTC‑GTTGCAAATGGTGATGt < 1:614910/235‑1 (MQ=255) ttaTCATTTGCTCGGTAAACCTGATTAGCGTGAAGGTATTCGGTTAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGGCGGGCAACCGACCGGTATTCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCATGGTAATGTC‑GTTGCAAATGGTGATGTTTGCt < 1:993660/237‑1 (MQ=255) aTCATTTGCGCCGTAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGGCGGGCAACCGACCGGTATTCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCATGGTAATGTC‑GTTGc < 1:346652/220‑1 (MQ=255) cATTTGGGCCGGAAACCCGGGGGGCGGGGAGGGATTCGGGTGGTTGGAATTTGGGTTTTCGTTCCTTAAAGTCGCCACCTTAAGCAGCATGATTGTCGCCGTTTTCGGCATAATCAGCTGGGGGATTGGCAACGGGGGGCAACCGACCGGTATTCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCATGGTAATGTC‑GTTGCAAATGGTGATGTTTGCTTACg < 2:538232/239‑1 (MQ=255) ttGCGCCGTAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGGCGGGCAACCGACCGGTATTCATAACCTGTGGGGCAACGGCGGCTTCTTCAGTAACGGCGGGCTTGGCATGGGAATGGC‑GTTGCAAATGGGGAGGGTTGCTTTCGGTg > 1:791431/1‑239 (MQ=255) ttGCGCCGTAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGGCGGGCAACCGACCGGTATTCATAACCTGTGGAGCAACGGCGGCTTCTTCAGGAAAGGCCGGCATGGGATGGTAAATTCGGTTGC‑AATGGGGAGGTTTGCTTAAgggg > 1:547400/1‑237 (MQ=255) ttGCGCCGTAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGGCGGGCAACCGACCCGTATTCATAACCTGTGGGGCAACGGCGGGTTCTTCCGGAACAGCGGGGTTGGCAGTGTGATGTC‑GTTGGAAAAgggggggtgtgttttcgtgg > 2:1027721/1‑221 (MQ=255) cGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGGCGGGCAACCGACCGGTATTCATAACCTGTGGGGCAACGGCGGCGTCTTTAGTAAAGGGCGGCTTGGCAGTGGAATGTT‑GTTGCAAATGGTGATGTTTGTTTACgggggggaggaaaaaaatggggtga > 2:1041507/1‑220 (MQ=255) tttgcggggtgCTGGATTTTTGGTTCTTTTTTTTTAATGTCGCCACCATCATCATCATGATTGGCGCCGGTTTCGGCATAATCATCTGGGGGATTGGCAAGGGCGGGCAACCGACCGGTATTCATAGCCTGTGGAGCAACTGCGGCTTCTTCAGTAACGGCTGGTTTGGCATGGTAATGTC‑GTTGGAAATGGTGATGTTTGCTTACGGTGGGATCGAAATTATCGGGATTACCGCCGGt < 2:1007069/229‑1 (MQ=255) gttgggATTTTTGGTCCTCGTTCTTTAAAGTCGCCACAATCATCACCATGATTGTCGCCGGTTGCGGCATCATCATCTGGGGGATTGGCAACGGCGGGCAACCGACCGGTATTCATAACCTGTGGAGCAACGGCGGCTTTTTCAGTAACGGCTGGCTTGGCATGGTAATGTC‑GTTGCAAATGGTGATGTTTGCTTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGaa < 1:378681/234‑1 (MQ=255) ttttgtttCTCTTTTTTTAAAGTCCCCACCGGCATCATCTGGATTGTGCCCGGTTTGGCCATCATCATCTGGGGTATTGGCAAGGCGGGGCAGCCGCCGGGTATTCAAAACCTGGGGAGCACCGGAGGTTTCTTCAGTAACGGCTGGCTTGGCATGGTAATGTC‑GTTGCAAATGGTGATGTTTGCTTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTga < 2:193706/233‑1 (MQ=255) ttttGGTTTTCTTTTTTTAAAGCCCCCCCCACTCTCATCAGGATGGTCGCCGGGTTCGGCATCACAATCGGGGGGATGGGCACCGGGGGGCAACCGCCCGGTATTCATAACCTGTGGAGCAACGGCGGTTTCTCCAGTAACGGTTGGCTTGGCATGGTAATGTC‑GTTGCAAATGGTGATGTTTGCTTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTga < 2:30950/236‑1 (MQ=255) ttaaagcgcccacctCCATCATCATGATGGCGGGCGGTTCGGGAAGCATCATCGGGGGGATTGGGAGGGGGGGGCAACCGACCGGTTTTCAAACCTTGTGGAGCAACGGCGGTTTCTACAGTAACGGCTGGCTTGGCATGGTAATGTC‑GTTGAAAATGGTGATGTTTGCTTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGt < 2:354837/230‑1 (MQ=255) ccaccaTCATCATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGGCGGGCAACCGACCGGTATTCATAACCTGTGGAGCAACGGCGGcttctt < 2:867176/109‑1 (MQ=255) ccaccaTCATCATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGGCGGGCAACCGACCGGTATTCATAACCTGTGGAGCAACGGCGGcttctt > 1:867176/1‑109 (MQ=255) gtttttGTCGCCGTTTCCGGGTTCCTCATCGGGGGGATTGGAAGGGGCGGGCCACCGACGGGTATTCATACCCTTGGGAGCAAGGGCGGTTTCTTCAGTAACGGGGGGCTTGGCATGGTAATGGC‑GTGGCAAATGGTGATGTTTGCTTACGGGGGGATGGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCg < 2:547400/235‑1 (MQ=255) ttGCCGCCGGTTGCGGCATCATCATCTGGGGGATTGGAAACGGCGGGCAACCGACCGGTATTCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCATGGTAATGTC‑GTTGCAAATGGTGATGTTTGCTTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTAtt < 1:135127/239‑1 (MQ=255) ggtgggtgggcgctctatattgggggggATGGGCAGGGGCGGACACGCGACGGGTATTAATACCCGTGGGAGCACCGGGGGCTTTGTCGGAAAGGTCTGGTTTGGAATGGTAATGTC‑GTTGCAAATGGGGATGTTTGCTTAGGGGGGGTGGGAAATTATCGGGATTTCCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTg < 2:922769/215‑1 (MQ=255) tttgggtctcattctgggggggATTGGAAGCGGCGGGCAACCGACCGGTATTCATAACCTGGGGAGCAACGGCGGCTTCTTCAGTAAGGGGTGGCTTGGCATGGTAATGTC‑GTTGCAAATGGTGATGTTTGCTTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTGGTGTTc < 2:125623/221‑1 (MQ=255) ttgggctttcacttcTGGGGGGTTGCAAAGGGGGGGCAACGACCCGGTTTTCAAACCTTGTGGAGCAAGGGGGATTTTTACAGTAACGGCTGGTTGGGCATGGTAAGGTC‑GTTGAAAATGGGGATTTTTGCTTAGGGGGGAATCGAAATTATCGGGTTGACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTGGTGTTCTa < 2:742626/226‑1 (MQ=255) ttCGGAATCATCCTCGGGGGGGTTGGCACCGGCGGGAACCCGACCGTTTTTATTACCCTGTGGAGCAACGGCGTCTTCTTCAGGAACGGCTGGCTTGGCATGGTAATGTC‑GTTGCAAATGGTGATGTTTCCTGGCGGGGGGATCGAAATTATCGGGATTACCGGCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTGGTGTTCTa < 2:1044978/239‑1 (MQ=255) catcttcatCTGGGGGATTGGCAACGGCGGGCAACCGTCCGGTATTCATAACCTGTGGAGCAACGGCGGTTTCTTCAGTAACGGCTGGCTTGGCATGGTAATTTC‑GTTGCAAATGGTGATGTTTGCTTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGt < 1:420441/196‑1 (MQ=255) tatagtcggggggATTGGCAACGGCGGGCAACCGACCGGTTTGTATAACCTTTGGAGCAACGGCGGTTTCTTCAGTAACGGCGGGCTTGGAATGGTAATGTC‑GTTGAAAATGGTGATGTTTGCTTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTGGTGTTCTACGTCGGTa < 1:1027721/231‑1 (MQ=255) actcatcTGGGGGATTGGCAACGGCGGGCAACCGACCGGTTTTCATAACCTGTGGAGCAACGGCGGTTTCTTCAGTAACGGCTGGCTTGGCATGGTAATGTC‑GTTGCAAATGGTGATGTTTGCTTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTGGTGTTCTACGTCGGTa < 1:840213/237‑1 (MQ=255) tGGGGGATTGGCAACGGCGGGCAACCGGCCGGTTTTCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACGGTTGGCTTGGCATGGTAATGTC‑GTTGAAAATGGTGATTTTTGCTTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTGGTGTTCTACGTCGGTACGCTGtt < 1:851391/239‑1 (MQ=255) ggcacgggcggGCACCCGTCTGGTTTTCATACCCGGGGGAGCAACGGCGGTTTTTTCATTAAGGGCTGGCTTGGCATGGTAATGTC‑GTTGCAAAGGGTGAGTGTTGCTTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAGGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTGGTGTTCTACGTCGGTACGCTGTTCGTCATTAt < 2:350650/233‑1 (MQ=255) tataagggacagtttctaacccTGGGGGGCAGCGGGGGTTTCTTCAGTAACGGTGGGCTTGGAATGGTAATGTC‑GTGGAAAATGGTGTTGTTTGCTTCGGGTGGGACCGAATTTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTGGTGTTCTACGTCGGTACGCTGTTCGTCATTATGTCTATCTAccc < 2:888100/219‑1 (MQ=255) aaCCGACCGGTATTCATAACCTGGGGAGCAACGGGGTCTTCTTCAGTAACGGCTGGCTGGGCATGGTAATGTC‑GTTGCAAATGGTGATGTTTGCTTACGGTGGGATCGAAATTAGCGGGATTCCCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTGGTGTTCTACGTCGGTACGCTGTTCGTCATTATGTCTATCTAccc < 1:233658/238‑1 (MQ=255) ccgaccgGTATTCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCATGGTAATGTC‑GTTGCAAATGGTGATGTTTGCTTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGGGAAATCGATACCGCGTGCGATTAACTCCGTGCCGGTGCGTATTCTg > 1:194268/1‑192 (MQ=255) gTATTCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCATGGTAATGTC‑GTTGCAAATGGTGATGTTTGCTTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGCTTAACTCCGGGGCGGTGCGGAATCTGGGGGTCTACGTCGGGACGCTGTTCGTCCTTATGTCTATTTACCCGGGGAATCAg > 2:316307/1‑239 (MQ=255) tCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCATGGTAATGTC‑GTTGCAAATGGTGATGTTTGCTTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTGGTGTTCTACGTCGGTACGCTGTTCGTCATTATGTCTATCTACCCGTGGAATCAGGGTg > 1:927111/1‑239 (MQ=255) ccTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCATGGTAATGTC‑GTTGCAAATGGTGATGTTTGCTTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTGGTGTTCTACGTCGGTACGCTGTTCGTCATTATGTCTATCTACCCGTGGAATCAGGTTGGCACt > 1:527116/1‑238 (MQ=255) cTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCATGGTAATGTC‑GTTGCAAATGGTGATGTTTGCTTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGGATTCTGGTGTTCTACGTCGGTACGCTGTTCGTCATTATGTCTATCTACCCGTGGAATCAGGTTGGCACTg > 1:969974/1‑238 (MQ=255) gtgGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCATGGTAATGTC‑GTTGCAAATGGTGATGTTTGCTTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGGATTCTGGTGTTCTACGTCGGTACGCTGTTCGTCATTATGTCTATCTACCCGTGGAATCAGGCTgctccttat > 1:888100/1‑230 (MQ=255) gtgGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCATGGTAATGTC‑GTTGCAAATGGTGATGTTTGCTTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGGGCCGATGCGTATTCTGGTGTTCTACGTCGGGACGCCGTTCGTCATTATGTCTTTCTACCCGTGGAATCAGGTTGGCATTGCCg > 1:618876/1‑239 (MQ=255) | TATATGGGTGTCTGGTTCCCGACGGTGCCGCACTGGATTTGGGTACTGAGCGTGGTGCTGATCATTTGCGCCGTAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGGCGGGCAACCGACCGGTATTCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCATGGTAATGTC‑GTTGCAAATGGTGATGTTTGCTTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTGGTGTTCTACGTCGGTACGCTGTTCGTCATTATGTCTATCTACCCGTGGAATCAGGTTGGCACTGCCG > NC_000913/421322‑421784 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |