| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 501,710 | T→C | 16.0% | E510G (GAG→GGG) | ybaL ← | inner membrane putative NAD(P)‑binding transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 501,710 | 0 | T | C | 16.0% | 190.3 / 5.5 | 81 | E510G (GAG→GGG) | ybaL | inner membrane putative NAD(P)‑binding transporter |
| Reads supporting (aligned to +/- strand): ref base T (47/20); new base C (2/12); total (49/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.55e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATA‑TTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGC‑GATTTCACGCT‑CGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCATTGCCCAATACTGCGCGGACCCCGCGCTCTCGCAGCTCATCAACACGGGTTCGTGACGTCTCAATCACCACCAGCGGAATATCAGAGGCGAGCAATT > NC_000913/501472‑501935 | tCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATA‑TTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGC‑GATTTCACGCT‑CGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGTCGCGGGCAATAAtct > 1:427896/1‑239 (MQ=255) tcGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATA‑TTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGC‑GATTTCACGCT‑CGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGAtttt > 1:752506/1‑239 (MQ=255) tcGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATA‑TTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGC‑GATTTCACGCT‑CGCCCATCACTACCTGATTCGCACCACGTTCGGGGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAACTCCACAATCCGGAtttt > 2:627716/1‑239 (MQ=255) aTGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATA‑TTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGC‑GATTTCACGCT‑CGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGc > 1:616363/1‑239 (MQ=255) gcgcGTCTTATCATGCCTACATATTTTTCATA‑TTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGC‑GATTTCACGCT‑CGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCCCAATATCCGGATTTTTCGCGCGGGCAGATGCccca > 2:240770/1‑238 (MQ=255) tCTTATCATGCCTACATATTTTTCATA‑TTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGC‑GATTTCACGCT‑CGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGGTTTTTCGCGCGGGCAGATGCCACAAtctc > 1:196135/1‑238 (MQ=255) tttctcccTATATTTTTTTATTT‑TTTTACTCCCGCCCACCCCCCTTTCCCCCCCCCCCCCCCCCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGC‑GATTTCACGCT‑CGCCCATCACTACCTGATTCGCCCCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCAccc < 2:616363/233‑1 (MQ=255) cctaattttttttATATTTTTCCCTCCGACACCCCCCTTCTCCCCCGCCCCCCCCC‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGC‑GATTTCCCGCT‑CGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCAt < 1:209159/232‑1 (MQ=255) cATATTTTTCATA‑TTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGC‑GATTTCACGCT‑CGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCCGATGCCACAATCTCACCCCCTTCATAAc > 1:739462/1‑238 (MQ=255) cATATTTTTCATA‑TTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGC‑GATTTCACGCT‑CGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAAcc > 1:745391/1‑239 (MQ=255) ttttCATA‑TTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGC‑GATTTCACGCT‑CGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTgg > 1:383900/1‑239 (MQ=255) ttCATA‑TTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGC‑GATTTCACGCT‑CGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCCCCCGGGCAGATGCAACAATCTAACCCGCTTCATAACCGTTGGGa > 2:899230/1‑239 (MQ=255) ttACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGC‑GATTTCACGCT‑CGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCCCAATCTCACCCGCTTCATaa > 1:720322/1‑222 (MQ=255) ggCAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGC‑GATTTCACGCT‑CGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAAcc > 1:837870/1‑216 (MQ=255) ccttttccccctgcccccccccccccGCCGGTGGCGTTTCCAGCAGTTCCCGCATGGCTCGGGC‑GATTTCACGCT‑CCCCCATCACTACCGTATTCGCACCACGTTCGGTCATATACGCCATTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGca < 1:899230/216‑1 (MQ=255) gTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGC‑GATTTCACGCT‑CGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAAtc > 1:225068/1‑189 (MQ=255) tttACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGC‑GATTTCACGCT‑CGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACAt > 1:769593/1‑239 (MQ=255) cccGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGC‑GATTTCACGCT‑CGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCCATAATCTCAATATCCGGATTTTTCGCTCGGGCAGATGCCACAATCTCACCCGCTTCATAACCCTTGGGAATCGTCAGGTACACCCATTTTGCACATTCCAg > 2:229335/1‑239 (MQ=255) gTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGC‑GATTTCACGCT‑CGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCCGact > 1:236851/1‑237 (MQ=255) gTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGC‑GATTTCACGCT‑CGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAAATg > 2:93062/1‑239 (MQ=255) gccgGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGC‑GATTTCACGCT‑CGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTCGGAATCGTCAGGACCCGCCATTTTGCACATTCCAAATGCCCAAGttaccaaat > 2:628270/1‑232 (MQ=255) tCCAGCAGTTCCAGCATGGTACGGGC‑GATTTCACGCT‑CGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACACGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCCTTTTGCACATTCCAGATTCGCCAGTTGCATAATTTCttcgttcc > 1:207816/1‑237 (MQ=255) ttttaaagaccagggTCCGGGC‑GATTTCCCGCC‑CCCCCATCACCACCTGATTGCCCCCACGTTCGGTGATATCCGCCACTTCATCGTCATAATGGGCGCGGGCAATAACCTCAAATTCCGGATTTTTCGCGCGGGAAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCa < 2:928684/226‑1 (MQ=255) tcattctccccagggtgggggC‑GTTTTCACCGT‑TGCCCATCAATACCCTATACGCCCCACGTTCGGTGATATACGCCTATTCACCGCCATAATGGGCGCGGGCAATAATCTCAATTCCCGGTTTTTTCGCGCGGGCAGAGGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCa < 2:126555/221‑1 (MQ=255) gctcttCCAGCCTGGCACGGGC‑AGTTGCCCGCTCCGCCCA‑CTCTTCCTGATTCGCCCCAAGTTCGGGCATATACGCCCCTTCATCGTAATAATGGGCGCGGGAAATAATCCCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCa < 2:1013359/235‑1 (MQ=255) gcatttcctggctGGTTCGGGC‑GATTTCCCGCC‑CCCCCCTCCCTCCCTTATTCGCCCCACGTTCGGTGATATACGCCCCTTTATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCa < 2:156737/227‑1 (MQ=255) gcattgccaccaTGGGCCGGGG‑GATTCCCCGCC‑CGCCCATAACTACCTGATTCGCACCACTTTCGGTGATATACGCCACTTCATCGTCATAAGGGGCGCGGGCAATAATCCCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCa < 2:616092/233‑1 (MQ=255) gcagTTCCAGCATGGTACGGGC‑GATTTCACGCT‑CGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCa < 1:93062/239‑1 (MQ=255) cggtttCCCGCTTGGTCGGGGC‑GTTTTCCCGCC‑CGCCCTTCACTACCGGATTCGCCCCACGTTGGGTAATAACCGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCa < 2:530040/235‑1 (MQ=255) cgctttccccctgggTACGGGCAGTTCTCACGC‑‑CGCCCATCTTCACCTGTTCCCCCACCCGTTGGGGCAAATAAGCCCTTTCATCTTCAAACTGGGCGCGGCCAATAATATCAATATCCGGTTTTTTGGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCa < 2:771272/226‑1 (MQ=255) cctgttccccatggggcggggT‑GATTTCACTCC‑CCGCCATCCCTACCGGGTTCGCCCAGCGTTGGGGGATTTACGCCCTTTCATCGGCATAATGGGGGCGGGCAATAATCCCAATACCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCa < 2:958791/221‑1 (MQ=255) ccctttCCACCCTGGTCGGGGC‑GTTTTCACCCC‑CGCCCATCCCTCCCTGATTCCCCCCCCGTTCGGTTATATACCCCCCTTCATCGTCATAATGGGCGCGGGCAATAATCCCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCa < 2:1080074/235‑1 (MQ=255) acattccccgctgggTCCGGGC‑TTTTTCACCGC‑CCCCCATCCCTTCCGTATTCCCACCCCGTTCGGTATAATACGCCCCTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCa < 2:196135/226‑1 (MQ=255) tCCACCCTGGTACGGGC‑GTTTTCCCGCT‑CGCCCATCACTCCCTGATTCGCACCACGTTCGGTGATATACGCCACTTCCTCGGCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCATTGcc < 2:752506/239‑1 (MQ=255) ccccagctgtttcggcggttttCCCGCT‑CGCCCTCTCCTACCTTATTCCCACCACCGTCGGTAATATACGCCTCTTCACCGTCATAATGGGCGCGGGCAATAATCCCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCATTGcc < 2:917260/220‑1 (MQ=255) aTGGCACGGGC‑GTTTTCACGCC‑GGCCCATCACTTCCTGATTCTCTCCACGTTCGGTGATATACGCCACTTCAGCGTCATAATGGGCGCGGGCAATAATCTCAATAGCCGGATTTGTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCATTGCCCAATa < 1:445282/238‑1 (MQ=255) gTACGGGC‑GATTTCACGCT‑CGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCATTGCCCAATACTgc > 1:653522/1‑239 (MQ=255) gTACGGGC‑GATTTCACGCT‑CGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCATTGCCCAAAACTg > 1:751786/1‑238 (MQ=255) gC‑GATTTCACGCT‑CGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCATTGCCCAATCCTCCACggg > 1:1059801/1‑237 (MQ=255) gC‑GATTTCACGCT‑CGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCATTGCCCAATACTGCCCggc > 1:220914/1‑237 (MQ=255) aTTTCACGCT‑CGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCATTGCCCAATACTGCGCGGAcac > 1:485689/1‑236 (MQ=255) tttCACGCT‑CGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCATTGCCCAATa > 1:928684/1‑225 (MQ=255) ttCACGCT‑CGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATTGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCATTGCCCAAAACTCCGCGGCcccccc > 2:110460/1‑237 (MQ=255) ccccccccTTCCCTCCCTGGTTCGCCCCCCGTTCGGTGATAAACGCCATTTCACCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGGGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCATTGCCCAATACTGCGCGGACCCCGCGctct < 2:751786/234‑1 (MQ=255) gCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCATTGCCCAATACTGCGCGGACCCCGCGCTCTCGc > 1:88952/1‑238 (MQ=255) cccATCCCCACCGGTTTCGCACCCCGTTCGGGGATATACGGCCTTTCATCGGAAAAATGGGGGCGGGAAAGAATCTCAAGATCCGGATTTTTCGCGCGGGAAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCATTGCCCAATACTGCGCGGACCCCGCGCTCTCGCAg < 2:915770/239‑1 (MQ=255) aTCCCTACCTGATTCGCACCACGTTCGGTGATATACCCCCCTTCATTGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCATTGCCCAATACTGCGCGGACCCCGCGCTCTCGCAGCtc < 1:110460/239‑1 (MQ=255) tCACTACCTGATTCGCACCCCGTTCGGGGATATACGCCACTTCCTCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCa < 2:599863/200‑1 (MQ=255) aCCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCATTGCCCAATACTGCGCGGACCCCCCGCCCCCGCAGCCCACCaaa > 2:131832/1‑238 (MQ=255) ccgtaTTCCCCCCACGTTCGGTTATATCCCCCACTTCATCCTCATAAGGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGGAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCATTGCCCAATACTGCGCGGACCCCGCGCTCTCGCAGCTCATCAaca < 1:904142/235‑1 (MQ=255) ccTGTTTCGCCCCCCTTGCGGTGATTTACGCCACTTCCCCGCCAAAATGGGGCAGGGCAATAACCCCAAAACCCGGATTTTGCGGGCGGGAAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCATTGCCCAATACTGCGCGGACCCCGCGCTCTCGCAGCCCATCAaca < 2:769593/239‑1 (MQ=255) ccTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCATTGCCCAATACTGCGCGGACCCCGCGCTCTCGCAGCTCATCAac > 1:788461/1‑238 (MQ=255) gATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCATTGCCCAATCCTGCGCGGCCCCCGCGCTCTCGCAGCCCATCAACACgg > 2:904142/1‑239 (MQ=255) aTTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCATTGCCCAATa > 1:599863/1‑200 (MQ=255) gCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCATTGCCCAATACTGCGCGGACCCCgcgc < 1:1001196/213‑1 (MQ=255) gCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCATTGCCCAATACTGCGCGGACCCCgcgc > 2:1001196/1‑213 (MQ=255) accacGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACAGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTATTCGTTCGCCGCATGGCCCAATACTGCGCGGACCCCGCGCCCTCCCCGCTCACCAAAACGGGTTCgg > 2:405075/1‑237 (MQ=255) accacGTTCGGTGATATACGCCACTTCATCGTCATAATAGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGTGGGCAGATGCCACAATTTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCAAGATGCCCCAGTTGCATAATTTCCTCGTTCGACGCATTGCCCCAACCTTCCCGGACCCCGGGCTTCCCCACCTCCTCAACACGGGtcctga > 2:904794/1‑234 (MQ=255) cGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGACCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTGGCCGCATTGCCCAATACTCCCCGGGCCCCGCCCTCTCGCCGCCCCTCAACACGGGTTCGTGCCg > 2:24236/1‑238 (MQ=255) tCGGTGAAATACGCCACTTCCACGTCATAATGGGCTCGGGCAATAATCCCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCATTGCCCAATACTGCGCGGACCCCGCGCTCTCGCAGCTCATCAACACGGGTTCGTGACGtct < 1:1014342/238‑1 (MQ=255) gTGATATACGCCACTTCATCGTCATAATGTGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTTGCCGCATTGCCCAATACTGCGCGGACCCCGCGCCCTTGCACCTCACCACAACGGGTTCGTGACGCTTCaa > 1:279166/1‑238 (MQ=255) ccctcttttcggtaaaaaTGGGCGCGGGCAAATATCCCCATTCCCGGATTTTTCGGGCGGGCAAAAGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCATTGCCCAATACTGCGCGGACCCCGCGCTCTCGCAGCTCATCAACACGGGTTCGTGACGTCTCAATCACCACCAg < 2:1019204/223‑1 (MQ=255) cACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCCGTTGCATAATTTCTTCGTTCGCCGCATTGCCCAATACTGCGCGGACCCCGCGCTCTCGCAGCTCATCAACACGGGTCCTTGACGTCTCAATCCcccccacgg > 2:596587/1‑236 (MQ=255) cACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCATTGCCCAATACTGCGCGGACCCCGCGCTCTCGCAGCTCATCAACACGGGTTCGTGACGTCTCAATCAccaccacc > 1:1019204/1‑236 (MQ=255) cACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCATTGCCCAATACTGCGCGGACCCCGCGCTCTCGCAGCTCATCAACACGGGTTCGTGACGTCTCAATCACCACCACCg > 1:188120/1‑239 (MQ=255) ttttCATCGGCAAAAGGGGCGGGGGAAAATACCCAAATATCCGGTTTTTTCGCGCGGGGAGATTCCAAAATCTCCCCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCATTGCCCAATACTGCGCGGACCCCGCGCTCTCGCAGCTCATCAACACGGGTTCGTGACGTCTCAATCACCACCAGCgg < 2:1059801/237‑1 (MQ=255) attttctgttCATAATGGGGGCGGGAAATATACCCAATATCCGGATTTTCCAGGCGGGCAGATGCCACAATCGCAAACTGTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTGCTTCGTTCGCCGCATTGCCCAATACTGCGCGGACCCCGCGCTCTCGCAGCTCATCAACACGGGTTCGTGACGTCTCAATCACCACCAGCgg < 2:207816/230‑1 (MQ=255) cTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGca > 1:242182/1‑119 (MQ=255) cTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCa > 1:115861/1‑161 (MQ=255) cTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCATTGCCCAATACTGCGCGGACCCCGCGCTCTCGCAGCTCATCAAAACGGGTTCGTGACGTCTCAATCACCACCAGCGGa > 1:635471/1‑239 (MQ=255) cTTCATCGTCATAATGGGCGCGGGCAATAATCCCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCa < 2:115861/161‑1 (MQ=255) cTTCATCGTCAAAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGca < 2:242182/119‑1 (MQ=255) ttCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCATTGCCCAATACTGCGCGGACCCCGCGCTCTCCCCGCTCATCAACACGGGTTCCTGACGCCCCAACCCCCACCACCGGaa > 2:561503/1‑239 (MQ=255) tCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCATTGCCCAATACTGCGCGGACCCCGCGCTCTCGCAGTTCATCAACACGGGTTCTGGACGTACCAATCCCCCCCCGCGGaaaacc > 2:549334/1‑235 (MQ=255) cGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCATTGCCCAATACTGCGCGGACCCCGCGCTCTCGCAGCTCATCAACACGGGTTCGTGACGTCTCAATCACCACCAGCGGAATATCa > 1:47932/1‑239 (MQ=255) gTCATAAGGGGCGCGGGCAATAAGCTCAATACCCGGATTTTTCGCGCGGGCAGATGCCACAAGCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCATTGCCCAATACTGCGCGGACCCCGCGCTCTCGCAGCTCATCAACACGGGTTCGTGACGTCTCAATCACCACCAGCGGAATATCa < 1:740021/238‑1 (MQ=255) gcgcGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTAGCCGCATTGCCCAATACTGCGCGGACCCCGCGCTCTCCCCGCTCATCAACACGGGTTCGGGACGGCTCAATCCCCCCCAGCGGACTATCCGCGGCGAGcca > 2:740021/1‑237 (MQ=255) cgcgGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCAtt > 1:510289/1‑145 (MQ=255) cgcgGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCATTGCCCAATACTGCGCGGACCCCGCGCTCTCGCAGCTCATCAACACGGGTTCGTGCCGTCTCAATCACCACCACCGGAATATCAGAGGCGAGCAAt > 1:800107/1‑239 (MQ=255) cgcgGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCATTGCCCAATACTGCGCGGACCCCGCGCTCTCGCAGCTCATCAACACGGGTTCGTGACGTCTCAATCACCACCAGCGGAATATCAAAGGCGGGCAAt > 1:192664/1‑239 (MQ=255) cgcgGGCAATAATCCCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCAtt < 2:510289/145‑1 (MQ=255) cgGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCATTGCCCAATACTGCGCGGACCCCGCGCTCTCGCAGCTCATCAACACGGGTTCGTGACGTCTCAATCACCACCAGCGGAATATCAGAGGCGAGCAAtt > 1:30369/1‑238 (MQ=255) | TCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATA‑TTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGC‑GATTTCACGCT‑CGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAATCTCAATATCCGGATTTTTCGCGCGGGCAGATGCCACAATCTCACCCGCTTCATAACCGTTGGGAATCGTCAGGATCAGCCATTTTGCACATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCATTGCCCAATACTGCGCGGACCCCGCGCTCTCGCAGCTCATCAACACGGGTTCGTGACGTCTCAATCACCACCAGCGGAATATCAGAGGCGAGCAATT > NC_000913/501472‑501935 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |