| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 520,534 | A→G | 24.8% | E40G (GAG→GGG) | ybbP → | putative ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 520,534 | 0 | A | G | 24.8% | 101.1 / 5.3 | 56 | E40G (GAG→GGG) | ybbP | putative ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base A (8/32); new base G (13/2); total (22/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.93e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TGTTTTCCCTCAACCGTGAACATGGCACCACGTTGATTATGGTGACCCACGACCTGCAACTGGCGGCACGCTGCGACCGCTGCTTACGGCTGGTGAACGGGCAGTTGCAGGAGGAAGCATGATTGCACGTTGGTTCTGGCGCGAATGGCGTTCGCCGTCGCTATTAATTGTCTGGCTGGCGCTAAGCCTGGCGGTGGCCTGCGTGCTGGCGCTGGGCAATATCAGCGATCGCA‑TGGAGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATGGCGGGCGATCGGGCGTTGCGCAGTTCACGCGAAGTGCCGCAAGCGTGGCTGGAGGAAGCGCAAAAGCGCGGCCTGAAAGTCGGCAAGCAGCTGACTTTCG‑CCACAATGACCTTTGCAGGCGACACACCGCAGCTGGCGAACGTCAAAGCGGTGGATGATATCTACCCGATGTATGGCGATCTGCAAACTAATCCCCCTGGCCT > NC_000913/520298‑520771 | tgTTTTCCCTCAACCGTGAACATGGCCCCCGGTTGATTATGGTGACCCACGACCTGCAACGGGCGGCACGCTGCGACCGCTGCTTACGGCTGGTGAACGGGCAGTTGCAGGAGGAAGCATGATTGCACGTTGGTTCTGGCGCGAATGGCGTTCGCCGTCGCTATTAATTGTCTGGCTGGCGCTAAGCCTGGCGGTGGCCTGCGTGCTGGCGCTGGGCAATATCAGCGATCGCA‑TGgaga < 1:78032/239‑1 (MQ=255) ccccCAAACGTGACCATGGCACCCCGTTGATTATGGTGACCCACCGCCTGCAACTGGCGGCACGCTGCGACCGCTGCTTACGGCTGGTGAACGGGCAGTTGCAGGAGGAAGCATGATTTCACGTTGGTTCTGGCGCGAATGGCGTTCGCCGTCGCTATTAATTGTCTGGCTGGCGCTAAGCCTGGCGGTGGCCTGCGTGCTGGCGCTGGGCAATATCAGCGATCGCA‑TGGAGAAGGGCt < 1:602222/239‑1 (MQ=255) tCAACCGTGAACATGGCACCACGTTGATTATGGTGACCCACGACCTGCAACTGGCGGCACGCTGCGACCGCTGCTTACGGCTGGTGAACGGGCAGTTGCAGGAGGAAGCATGATTGCACGTTGGTTCTGGCGCGAATGGCGTTCGCCGTCCCTATTAATTGTCTGGCTGGCGCTAAGCCTGGCGGTGGCCTGCGGGCTGGCGCTGGGCAATATCAGCGATCGCA‑TGGGGACGGGCttt > 1:659607/1‑237 (MQ=255) cAACCGTGAACATGGCACCACGTTGATTATGGTGACCCACGACCTGCAACTGGCGGCACGCTGCGACCGCTGCTTACGGCTGGTGAAAGGGCAGTTGCAGGAGGAAGCATGATGGCACGTTGGTTCTGGCGCGAATGGCGTTCGCCGTCGCTATAAATTTTCTGGCTGGCCCTAAGCCTGGCGGTGGCCTGCGTGCTGGCGCTGGGCAATATCAGCAAGCACA‑AGGGGAAGGGCTAAAg > 2:145554/1‑239 (MQ=255) tGAACATGGCACCACGTTGATTATGGTGACCCACGACCTGCAACTGGCGGCACGCTGCGACCGCTGCTTACGGCTGGTGAACGGGCAGTTGCAGGAGGAAGCATGATTGCACGGTGGTTCTGGCGCGAATGGCGTTCGCCGTCGCTATTAATTGTCTGGCTGGCGCTAAGCCTGGCGGTGGGCTGCGTGCTTGGACTGGGGAAATACAGCGATCGCA‑TGGGGAAGGGGTTAAGCCAgac > 2:684134/1‑237 (MQ=255) gAACATGGCACCACGTTGATTATGGTTACCCACGACCTGCAACTGGCGGCACGCTGCGACCGCTGCTTACGGCTGGTGAACGGGCAGTTGCAGGAGGAAGCATGATTGCACGTTGGTTCTGGCGCGAATGGCGTTCGCCGTCGCTATTAATTGTCTGGCTGGCGCTAAGCCTGGCGGTGGCCTGCGTGCTGGCGCTGGGCAATATCAGCGATCGCA‑TGGAGAAGGGCTTAAGCCAGCa < 1:768049/238‑1 (MQ=255) ggCACCACGTTGATTATGGTGACCCACGACCTGCAACTGGCGGCACGCTGCGACCGCTGCTTACGGCTGGTGAACGGGCAGTTGCAGGAGGAAGCATGATTGCACGTTGGTTCTGGCGCGAATGGCGTTCGCCGTCGCTATTAATTTTCTGGCTGGCGCTAAGCCTGGCGGGGGCCTGCGTGCTGGGGCTGGGCCATATCCGCGATCGCA‑TGGGGAAGGGCTTAAGCCAGCaaaagcgg > 2:96699/1‑234 (MQ=255) ggCACCACGTTGATTATGGTGACCCACGACCTGCAACTGGCGGCACGCTGCGACCGCTGCTTACGGCTGGTGAACGGGCAGTTGCAGGAGGAAGCATGATTGCACGTTGGTTCTGGCGCGAATGGCGTTCGCCGTCGCTATTAATTGTCTGGCTGGCGCTAAGCCTGGCGGTGGCCTGCGGGCTGGCGCTGGGCAATATCAGGGATCGCA‑TGGCGAAGGGGTTAAGCCCGCAAAGCCGt > 1:480769/1‑239 (MQ=255) ccccccGTTGATTATGGTGACCCCCGGCCTGCAACTGGCGGCCCGCTGCGACCGCTGCTTACGGCTGGGGAACGGGCAGTTGCAGGAGGAAGCATGATTGCACGTTGGTTCTGGCGCGAATGGCGTTCGCCGTCGCTATTAATTGTCTGGCTGGCGCTAAGCCTGGCGGTGGCCTGCGTGCTGGCGCTGGGCAATATCAGCGATCGCA‑TGGAGAAGGGCTTAAGCCAGCAAAGCCg < 2:688409/231‑1 (MQ=255) cGTTGATTATGGTGACCCACGACCTGCAACTGGCGGCACGCTGCGACCGCTGCTTACGGCTGGTGAACGGGCAGTTGCAGGAGGAAGCATGATTGCACGTTGGTTCTGGCGCGAATGGCGTTCGCCGTCGCTATTAATTGTCTGGCTGGCGCTAAGCCTGGCGGTGGCCTGCGTGCTGGCGCTGGGCAATATCAGCGATCGCA‑TGGGGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTa > 1:894890/1‑239 (MQ=255) tGATTATGGTGACCCACGACCTGCAACTGGCGGCACGCTGCGACCGCTGCTTACGGCTGGTGCACGGGCAGTTGCAGGGGGAAGCATGATTGCACGTTGGTTCTGGCGCGAATGGCCTTCGCCGTCGCTATTAATTTTCTGGCTGGCGCTAAGCCTGGCGGTGGCCTGCGGGCTGGCCGTGGGCGATATCAGCGCTCGCA‑GGGGGAAGGGGTTAAGCCCGCaaaagccggggtttaagg > 2:788725/1‑224 (MQ=255) gATTATGGTGACCCACGACCTGCAACTGGCGGCACGCTGCGACCGCTGCTTACGGCTGGTGAACGGGCAGTTGCAGGAGGAAGCATGATTGCACGTTGGTTCTGGCGCGAATGGCGTTCGCCGTCGCTATTAATTGTCTGGCTGGCGCTAAGCCTGGCGGTGGCCTGCGTGCTGGCGCTGGGCAATATCAGCGATCGCA‑TGGAGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATggc < 1:276603/239‑1 (MQ=255) aTTATGGTGACCCACGACCTGCAACTGGCGGCACGCTGCGACCGCTGCTTACGGCTGGTGAACGGGCAGTTGCAGGAGGAAGCATGATTGCACGTTGGTTCTGGCGCGAATGGCGTTCGCCGTCGCTATTAATTGTCTGGCTGGCGCTAAGCCTGGCGGTGGCCTGCGTGCTGGGGCTGGGCAATATCAGCGATCGCA‑TGGGGAAGGGCTTAAGCCAGCCAAGCCGGGAGTTTATg > 1:688409/1‑236 (MQ=255) aTTATGGTGACCCACGACCTGCAACTGGCGGCACGCTGCGACCGCTGCTTACGGCTGGTGAACGGGCAGTTGCAGGAGGAAGCATGATTGCACGTTGGTTCTGGCGCGAATGGCGTTCGCCGTCGCTATTAATTGTCTGGCTGGCGCTAAGCCTGGCGGTGGCCTGCGTGCTGGCGCTGGGCAATATCAGCGATTGCA‑TGGAGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATggcg > 1:851442/1‑239 (MQ=255) aTTATGGTGACCCACGACCTGCAACTGGCGGCACGCTGCGACCGCTGCTTACGGCTGGTGAACGGGCAGTTGCAGGAGGAAGCATGATTGCACGTTGGTTCTGGCGCGAATGGCGTTCGCCGTCGCTATTAATTGTCTGGCTGGCGCTAAGCCTGGCGGTGGCCTGCGTGCTGGCGCTGGGCAATATCAGCGATCGCA‑TGGAGAAGGGCTTAAGc < 1:231610/215‑1 (MQ=255) ttttggtccccccCGCCCTGCAACGGGCGGGCCCCTGCGGCCGCTGCTGACGGGTGGGGAACGGGCAGTTGCAGGAGGAAGCATGATTGCACGTTGGTTCGGGCGCGAATGGCTTTCGCCGTCGCTATTAATTGTCTGGCTGGCGCTAAGCCTGGCGGTGGCCTGCGTGCTGGCGCTGGGCAATATCAGCGATCGCA‑TGGAGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATggcg < 2:737008/229‑1 (MQ=255) tGGTGACCCACGACCTGCAACTGGCGGCACGCTGCGACCGCTGCTTACGGCTGGTGAACGGGCAGTTGCAGGGGGAAGCATGATTGCACGTTGGTTCTGGCGCGAATGGCGTTCGCCGTCGCTATTAATTGTCTGGCTGGCGCTAAACCTGGCGGGGGCCGTCGGTGTTGCCCTGGGCAAAATGCGCGATCGCC‑TGGGGAAGGGGGTAAGCCCGCAAACACGGGGGTTTagtggggggg > 2:276603/1‑230 (MQ=255) cccACGACCTGCAACTGGCGGCACGCTGCGACCGCTGCTTACGGCTGGTGAACGGGCAGTTGCAGGAGGAAGCATGATTGCACGTTGGTTCTGGCGCGAATGGCGTTCGCCGTCGCTATTAATTGTCTGGCTGGCGCTAAGCCTGGCGGTGGCCTCCGTGCTGGCGCTGGGCACAATACGCGATTCCA‑TGGGGAAGGGCTTTAGCCACCAAAACCCGGGGTTTTTgggggggggggggg > 2:911200/1‑231 (MQ=255) cccACGACCTGCAACTGGCGGCACGCTGCGACCGCTGCTTACGGCTGGTGAACGGGCAGTTGCAGGAGGAAGCATGATTGCACGTTGGTTCTGGCGCGAATGGCGTTCGCCGTCGCTATTAATTGTCTGGCTGGCGCTAAGCCTGGCGGGGGGCTCCGTGATGGCGCTGGGCAAAAATAGCGGTCCCAGTGGA‑AAGGGCTTAACCCAGCAAAACCGTGGGGTTCTggggcgggggcagg > 2:748768/1‑227 (MQ=255) cccACGACCTGCAACTGGCGGCACGCTGCGACCGCTGCTTACGGCTGGTGAACGGGCAGTTGCAGGAGGAAGCATGATTGCACGTTGGTTCTGGCGCGAATGGCGTTCGCCGTCGCTATTAATTGTCTGGCTGGCGCTAAGCCTGGCGGGGGCCTGCGGGCGGGCGCTGGGCAATATCCGCGATCGCA‑TGGGGAAGGGCTTAAGCCAGCAAAACCGGGGGTTTATggggggggggcggg > 2:847089/1‑231 (MQ=255) cccACGACCTGCAACTGGCGGCACGCTGCGACCGCTGCTTACGGCTGGTGAACGGGCAGTTGCAGGAGGAAGCATGATTGCACGGTGGTTCTGGCGCGAATGGCGTTCGCCGTCGCTATTAATTGTCTGGCTGGCGCTCAGACTGGCGGTGGCCTGCGTGCTGGCGCTGGGCCATATCAGCGAACGCA‑TGGAGAAGGGCTTAAACCAGCACAACCgccggcccttatacccaactcac > 2:231610/1‑216 (MQ=255) cTGCAACTGGCGGCACGCTGCGACCGCTGCTTACGGCTGGTGAACGGGCAGTTGCAGGAGGAAGCATGATTGCACGTTGGTTCTGGCGCGAATGGCGTTCGCCGTCGCTATTAATTGTCTGGCTGGCGCTAAGCCTGGCGGTGGCCTGCGTGCTGGCGCTGGGCAATATCAGCGATCGCA‑TGGAGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATGGCGGGCGATCGGGCGTTgcg < 1:781401/238‑1 (MQ=255) gcggcACGCTGCGACCGCTGCTTACGGCTGGTGAACGGGCAGTTGCAGGAGGAAGCATGATTGCACGTTGGTTCTGGCGCGAATGGCGTTCGCCGTCGCTATTAATTGTCTGGCTGGCGCTAAGCCTGGCGGTGGCCTGCGTGCTGGCGCTGGGCAATATCAGCGATCGCA‑TGGGGAAGGGCTTAAGCCAGCAAAGCCGTGGGTTTATggcgggcggcaggggggtggcccgtttccc > 1:453973/1‑216 (MQ=255) cGCTTCTTCCGGGTGGGGAACGGGCAGTTGCAGGAGGAAGTATTATTGCACGTTGGTTCTGGCGCGAATGGCGTTCGCCGTCGCTATTAATTGTCTGGCTGGCGCTAAGCCTGGCGGTGGCCTGCGTGCTGGCGCTGGGCAATATCAGCGATCGCA‑TGGAGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATGGCGGGCGATCGGGCGTTGCGCAGTTCACGCGAAGTGCCGCAAGCg < 2:1044867/239‑1 (MQ=255) cGCTGTTTACGGCTGGTGAACGGGCAGTTGCAGGAGGAAGCATGATTGCACTTTGGTTCTGGCGCGAATGGCGTTCGCCGTCGCTATTAATTGTCTGGCTGGCGCTAAGCCTGGCGGTGGCCTGCGTGCTGGCGCTGGGCAATATCAGCGATCGCA‑TGGAGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATGGCGGGCGATCGGGCGTTGCGCAGTTCACGCGAAGTGCCGCAAGCg < 2:833376/239‑1 (MQ=255) cGCTGGTTACGGCTGGTGAACGGGCAGTTGCAGGAGGAAGCATGATTGCACGTTGGTTCTGGCGCGAATGGCGTTCGCCGTCGCTATTAATTGTCTGGCTGGCGCTAAGCCTGGCGGTGGCCTGCGTGCTGGCGCTGGGCAATATCAGCGATCGCA‑TGGAGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATGGCGGGCGATCGGGCGTTGCGCAGTTCACGCGAAGTGCCGCAAGCg < 1:96699/239‑1 (MQ=255) ctgctTACGGCTGGTGAACGGGCAGTTGCAGGAGGAAGCATGATTGCACGTTGGTTCTGGCGCGAATGGCGTTCGCCGTCGCTATTAATTGTCTGGCTGGCGCTAAGCCTGGCGGTGGCCTGCGGGCTGGCGCTGGGCAATGTCCGCGAGCGCA‑TGGGGAAGGGCTTAAGCCACACAGGCCGGGGGTTGTTGGCGGGCGGTCGGGGGGGGCGCGGCTGACGCGGAGGGGGGCAAggggg > 2:1078776/1‑235 (MQ=255) ggtttgggCTGGTGACGGGGCAGGTGCAGGAGGAGGCTTGATTGCACGTTGGTTCTGGCGCGAATGGCGTTCGCCGTCGCTATTAATTGTCTGGCTGGCGCTAAGCCTGGCGGTGGCCTGCGTGCTGGCGCTGGGCAATATCAGCGATCGCA‑TGGAGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATGGCGGGCGATCGGGCGTTGCGCAGTTCACGCGAAGTGCCGCAAGCGTGGc < 2:851442/233‑1 (MQ=255) gCTGGTGAACGGGCAGTTGGAGGAGGAAGCATGAGTGCACGGTGGTTCTGGCGCGAATGGCGGTCGCCGTCGCTATTAATTGTCTGGCTGGCGCTAAGCCTGGCGGTGGCCTGCGTGCTGGCGCTGGGCAATATCAGCGATCGCA‑TGGAGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATGGCGGGCGATCGGGCGTTGCGCAGTTCACGCGAAGTGCCGCAAGCGTGGCTggagg < 1:374173/238‑1 (MQ=255) cAGTTGCAGGAGGAAGCATGATTGCACGTTGGTTCTGGCGCGAATGGCGTTCGCCGGCGCTATTAATTGTCTGGCTGGCGCTAAGCCTGGCGGTGGCCTGCGTGCTGGCGCTGGGCAATATCAGCGATCGCA‑TGGAGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATGGCGGGCGATCGGGCGTTGCGCAGTTCACGCGAAGTGCCGCAAGCGTGGCTGGAGGAAGCGCAAAAgcg < 1:263997/238‑1 (MQ=255) cgTTGCAGGAGGAAGCATGATTGCACGTTGGTTCTGGCGCGAATGGCGTTCGCCGTCGCTATTAATTGTCTGGCTGGCGCTAAGCCTGGCGGTGGCCTGCGTGCTGGCGCTGGGCAATATCAGCGATCGCA‑TGGAGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATGGCGGGCGATCGGGCGTTGCGCAGTTCACGCGAAGTGCCGCAAGCGTGGCTGGAGGAAGCGCAAAAgcgc < 1:939930/237‑1 (MQ=255) aGCATGATTGCACGTTGGTTCTGGCGCGAATGGCGTTCGCCGTCGCTATTAATTGTCTGGCTGGCGCTAAGCCTGGCGGTGGCCTGCGTGCTGGCGCTGGGCAATATCAGCGATCGCA‑TGGAGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATGGCGGGGGATCGGGGGGTGGGCAGGTTACGCGGAAGGCCGCCAGCGTGGCTGGGGGGAAGGCACAAACGCGGCCCGaaaagcg > 1:214455/1‑234 (MQ=255) attgttGCCCGTTGGTTCGGGCGCGAATGGCGTTCGCCGTCGCTATTAATTGTCTGGCTGGCGCTAAGCCTGGCGGTGGCCTGCGTGCTGGCGCTGGGCAATATCAGCGATCGCA‑TGGAGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATGGCGGGCGATCGGGCGTTGCGCAGTTCACGCGAAGTGCCGCAAGCGTGGCTGGAGGAAGCGCAAAAGCGCGGCCTGAAAGTCGGCa < 2:894890/234‑1 (MQ=255) aTTGCACGTTGGTTCTGGCGCGAATGGCGTTCGCCGTCGCTATTAATTGTCTGGCTGGCGCTAAGCCTGGCGGTGGCCTGCGTGCTGGCGCTGGGCAATATCAGCGATCGCA‑TGGGGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATGGCGGGGGATCGGGGGGGTGGCGGGTCCCCCGAAGGGGCGCAAGCGGGGGTGGGGGAAGGGCAAAAACGCGGGCCGAAAAAAGGCAagag > 2:133670/1‑237 (MQ=255) tGCACGTTGGTTCTGGCGCGAATGGCGTTCGCCGTCGCTATTAATTGTCTGGCTGGCGCTAAGCCTGGCGGTGGCCTGCGTGCTGGCGCTGGGCAATATCAGCGATCGCA‑TGGAGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATGGCGGGCGATCGGGCGTTGCGCAGTTCACGCGAAGTGCCGCAAGCg < 1:705632/193‑1 (MQ=255) cACGTTGGTTCTGGCGCGAATGGCGTTCGCCGTCGCTATTAATTGTCTGGCTGGCGCTAAGCCTGGCGGTGGCCTGCGTGCTGGCGCTGGGCAATATCAGCGATCGCA‑TGGAGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATGGCGGGCGATCGGGCGTTGCGCAGTTCACCCGAAGTGCCGCCAGCGTGGCTGGAGGAAGCGCCAAAACGCCGCCCGAAAATCGGCCagcagca > 1:571963/1‑237 (MQ=255) ggCGCATATTGCGTTGGCCGTCTCTATTTATTGTCTGGCTGGCGTTTAGCCTGGGGGTGGCCTGGCTTGTGGCGCTGGGCAATTTCAGCGATCGCA‑TGGAGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATGGCGGGCGATCGGGCGTTGCGCAGTTCCCGCGAAGTGCCGCAAGCGTGGCTGGAGGAAGCGCAAAAGCGCGGCCTGAAAGTCGGCAAGCAGCTGACTTTCG‑Ccaca < 2:458471/239‑1 (MQ=255) ccGTCGCTATTAATTGTCTGGCTGGCGCTAAGCCTGGCGGTGGCCTGCGTGCTGGCGCTGGGCAATATCAGCGATCGCA‑TGGAGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATGGCGGGCGATCGGGCGTTGCGCCGTTCACACGAAGTGCCGCAAGCGTGGCTGGAGGAAGCGCAAAAACGCGGCCTGAAAGTCGGCAAGCCACTGACTTTTG‑CCACACAGACCctttaccgcg > 1:254531/1‑231 (MQ=255) tataaggggctggcgtgggcTAAGCGTGGCGGTGGCCTGCGTGCTGGCGCTGGGCAATATCAGCGATCGCA‑TGGAGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATGGCGGGCGATCGGGCGTTGCGCAGTTCACGCGAAGTGCCGCAAGCGTGGCTGGAGGAAGCGCAAAAGCGCGGCCTGAAAGTCGGCAAGCAGCTGACTTTCG‑CCACAATGACCTTTGCAGGCGACACACCg < 1:448791/220‑1 (MQ=255) ttAATTGTCTGGCTGGCGCTAAGCCTGGCGGTGGCCTGCGTGCTGGCGCTGGGCAATATCAGCGATCGCA‑TGGAGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATGGCGGGCGATCGGGCGTTGCGCAGGTCACGCGAAGTGCCGCAAGCGTGGCTGGGGGAAGCGCAAAAACGCGGCCTGAAAGTCGGCAAGCAGCTGGCTTTTGCCCACAA‑GACCTTTTCAGGGGACACAccccc > 1:788139/1‑236 (MQ=255) ctggctggCGCTAAGCCTGGCGGTGGCCTGCGTGCTGGCGCTGGGCAATATCAGCGATCGCA‑TGGAGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATGGCGGGCGATCGGGCGTTGCGCAGTTCACGCGAAGTGCCGCAAGCGTGGCTGGAGGAAGCGCAAAAGCGCGGCCTGAAAGTCGGCAAGCAGCTGACTTTCG‑CCACAATGACCTTTGCAGGCGACACACCGCAGCTGGCg < 1:684134/238‑1 (MQ=255) tggcgggcGCTAAGGCTTGGGGGGGCCTGCGGGCCGGCGCTGGGCAATATCAGCGATCGCA‑TGGAGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATGGCGGGCGATCGGGCGTTGCGCAGTTCACGCGAAGTGCCGCAAGCGTGGCTGGAGGAAGCGCAAAAGCGCGGCCTGAAAGTCGGCAAGCAGCTGACTTTCG‑CCACAATGACCTTTGCAGGCGACACACCGCAGCTGGCGaa < 2:214455/239‑1 (MQ=255) cTGGCGTTGGCCTGCGTGCTGGCGCTGGGCAATGTCATCGATCGCA‑TGGAGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATGGCGGGCGATCGGGCGTTGCGCAGTTCACGCGAAGTGCCGCAAGCGTGGCTGGAGGAAGCGCAAAAGCGCGGCCTGAAAGTCGTCAAGCAGCTGACTTTCG‑CCACAATGACCTTTGCAGGCGACACACCGCAGCTGGCGAACGTCAAAGCGGTGga < 1:119671/239‑1 (MQ=255) tGGCGGTGGCCTGCGTGCTGGCGCTGGGCAATATCAGCGATCGCA‑TGGAGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATGGCGGGCGATCGGGCGTTGCGCAGTTCACGCGAAGTGCCGCAAGCGTGGCTGGAGGAAGCGCAAAAGCGCGGCCTGAAAGTCGGCAAGCAGCTGACTTTCG‑CCACAATGACCTTTGCAGGCGACACACCGCAGCTGGCGAACGTCAAAGCGGTGgat < 1:145554/239‑1 (MQ=255) gggggggggCCGGCGGGCGGGCGCGGGGAAATAACCGCGCTCGCA‑GGGGGAGGGGCGTAAGCCAGAAAAGCCGTGAGTTTATGGGGGGCGTTCGGGCGTTGCGCAGTTCACGCGAAGTGCCGCAAGCGTGGCTGGAGGAAGCGCAAAAGCGCGGCCTGAAAGTCGGCAAGCAGCTGACTTTCG‑CCACAATGACCTTTGCAGGCGACACACCGCAGCTGGCGAACGTCAAAGCGGTGgat < 2:991178/232‑1 (MQ=255) ggTGGCCTGCGTGCTGGCGCTGGGCAATTTCAGCGAGCGCA‑GGGAGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATGGCGGGCGATCGGGCGTTGCGCAGTTCACGCGAAGTGCCGCAAGCGTGGCTGGAGGAAGCGCAAAAGCGCGGCCTGAAAGTCGGCAAGCAGCTGACTTTCG‑CCACAATGACCTTTGCAGGCGACACACCGCAGCTGGCGAACGTCAAAGCGGTGgatgat < 2:76837/238‑1 (MQ=255) tGGCCTGGGTGGTGGCGCTGGGCAATATTAGCGATCGCA‑TGGAGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATGGCGGGCGATCGGGCGTTGCGCAGTTCACGCGAAGTGCCGCAAGCGTGGCTGGAGGAAGCGCAAAAGCGCGGCCTGAAAGTCGGCAAGCAGCTGACTTTCG‑CCACAATGACCTTTGCAGGCGACACACCGCAGCTGGCGAACGTCAAAGCGGTGGATGatat < 1:335079/238‑1 (MQ=255) tGGCCTGCGGGGTGGCGCTGGGCAATTTCAGCAGTCGAA‑TGGAGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATGGCGGGCGATCGGGCGTTGCGCAGTTCACGCGAAGTGCCGCAAGCGTGGCTGGAGGAAGCGCAAAAGCGCGGCCTGAAAGTCGGCAAGCAGCTGACTTTCG‑CCACAATGACCTTTGCAGGCGACACACCGCAGCTGGCGAACGTCAAAGCGGTGGATGatat < 1:692058/238‑1 (MQ=255) cTGCGTGCTGGCGCTGGGCAATTTCAGCGATCGGA‑TGGAGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATGGCGGGCGATCGGGCGTTGCGCAGTTCACGCGAAGTGCCGCAAGCGTGGCTGGAGGAAGCGCAAAAGCGCGGCCTGAAAGTCGGCAAGCAGCTGACTTTCG‑CCACAATGACCTTTGCAGGCGACACACCGCAGCTGGCGAACGTCAAAGCGGTGGATGATATCTAc < 2:453973/238‑1 (MQ=255) tGCGTGCTGGCGATGGGCAATATCAGCGATCGCA‑TGGAGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATGGCGGGCGATCGGGCGTTGCGCAGTTCACGCGAAGTGCCGCAAGCGTGGCTGGAGGAAGCGCAAAAGCGCGGCCTGAAAGTCGGCAAGCAGCTGACTTTCG‑CCACAATGACCTTTGCAGGCGACACACCGCAGCTGGCGAACGTCAAAGCGGTGGATGATATCTAcc < 1:178464/238‑1 (MQ=255) ggCGTGCTGGCGCTGGGCAATAGCAGCGATCGCA‑TGGAGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATGGCGGGCGATCGGGCGTTGCGCAGTTCACGCGAAGTGCCGCAAGCGTGGCTGGAGGAAGCGCAAAAGCGCGGCCTGAAAGTCGGCAAGCAGCTGACTTTCG‑CCACAATGACCTTTGCAGGCGACACACCGCAGCTGGCGAACGTCAAAGCGGTGGATGATATCTAcc < 1:302949/237‑1 (MQ=255) gggTGCTGGGGCTGGGCAATATCAGCGGTCGCA‑TGGAGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATGGCGGGCGATCGGGCGTTGCGCAGTTCACGCGAAGTGCCGCAAGCGTGGCTGGAGGAAGCGCAAAAGCGCGGCCTGAAAGTCGGCAAGCAGCTGACTTTCG‑CCACAATGACCTTTGCAGGCGACACACCGCAGCTGGCGAACGTCAAAGCGGTGGATGATATCTACCCg < 2:788139/237‑1 (MQ=255) gcTGGGCAATGTCAGCGATCGCA‑GGGAGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATGGCGGGCGATCGGGCGTTGCGCAGTTCACGCGAAGTGCCGCAAGCGTGGCTGGAGGAAGCGCAAAAGCGCGGCCTGAAAGTCGGCAAGCAGCTGACTTTCG‑CCACAATGACCTTTGCAGGCGACACACCGCAGCTGGCGAACGTCAAAGCGGTGGATGATATCTACCCGATGTATGGc < 1:747847/238‑1 (MQ=255) ataaccgCGGTCGCA‑TGGAGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATGGCGGGCGATCGGGCGTTGCGCAGTTCACGCGAAGTGCCGCAAGCGTGGCTGGAGGAAGCGCAAAAGCGCGGCCTGAAAGTCGGCAAGCAGCTGACTTTCG‑CCACAATGACCTTTGCAGGCGACACACCGCAGCTGGCGAACGTCAAAGCGGTGGATGATATCTACCCGATGTATGGCGATCTGCa < 1:976841/232‑1 (MQ=255) tatCAGCGATCGCA‑TGGAGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATGGCGGGCGATCGGGCGTTGCGCAGTTCACGCGAAGGGCCGCAAGCGTGGCTGGAGGAAGCGCACAAGCGCGGCCTGCAAGCCGGCCAACAGCGGAGTTTCG‑CCCCAATGACCCTTTCAGGCGGCACACCGCCGCTGGGGACCGCCAAAACGGGGGGGGGTATCTTCCCCATGGATGGGGAtgcgacaa > 2:128659/1‑232 (MQ=255) cggtgtCGCG‑TGGGGGAGGGCTTAAGCCTGCAAAGACTTGGGTTTATGGCTGGCGGTCGGGCGTTGCGCATTTCACGCGAAGTGCCGCAAGCGTGGCTGGAGGAAGCGCAAAAGCGCGGCCTGAAAGTCGGCAAGCAGCTGACTTTCG‑CCACAATGACCTTTGCAGGCGACACACCGCAGCTGGCGAACGTCAAAGCGGTGGATGATATCTACCCGATGTATGGCGATCTGCAAACTaa < 2:411039/234‑1 (MQ=255) cGCA‑TGGAGAAGGGCTTAAGCCAGGAAAGCCGGGAGTTTATGGGGGGCGATCGGGCGTTGCGCAGTTCACGCGAAGTGCCGCAAGCGTGGCTGGAGGAAGCGCAAAAGCGCGGCCTGAAAGTCGGCAAGCAGCTGACTTTCG‑CCACAATGACCTTTGCAGGCGACACACCGCAGCTGGCGAACGTCAAAGCGGTGGATGATATCTACCCGATGTATGGCGATCTGCAAACTAATccccc < 2:254531/239‑1 (MQ=255) gagaAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATGGCGGGCGATCGGGCGTTGCGCAGTTCCCGCGAAGTGCCGCAAACGGGGCTGGGGGAAACGCCAAAACGCGGCCCGAAAGTCGGCAAGCAGCTTGCTTTCG‑CCCCCAAGACCTTTGCAGGCGACCAACCGCCGCCGGCGACCGCCACAACGGGGGAGGTTAACTACCCGATGAAGGGCGCGCTGccaccaacacacccccgccc > 2:993010/1‑220 (MQ=255) | TGTTTTCCCTCAACCGTGAACATGGCACCACGTTGATTATGGTGACCCACGACCTGCAACTGGCGGCACGCTGCGACCGCTGCTTACGGCTGGTGAACGGGCAGTTGCAGGAGGAAGCATGATTGCACGTTGGTTCTGGCGCGAATGGCGTTCGCCGTCGCTATTAATTGTCTGGCTGGCGCTAAGCCTGGCGGTGGCCTGCGTGCTGGCGCTGGGCAATATCAGCGATCGCA‑TGGAGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATGGCGGGCGATCGGGCGTTGCGCAGTTCACGCGAAGTGCCGCAAGCGTGGCTGGAGGAAGCGCAAAAGCGCGGCCTGAAAGTCGGCAAGCAGCTGACTTTCG‑CCACAATGACCTTTGCAGGCGACACACCGCAGCTGGCGAACGTCAAAGCGGTGGATGATATCTACCCGATGTATGGCGATCTGCAAACTAATCCCCCTGGCCT > NC_000913/520298‑520771 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |