| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 647,210 | A→C | 26.2% | G100G (GGT→GGG) | citG ← | 2‑(5''‑triphosphoribosyl)‑3'‑dephosphocoenzyme‑A synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 647,210 | 0 | A | C | 26.2% | 85.9 / 7.2 | 58 | G100G (GGT→GGG) | citG | 2‑(5''‑triphosphoribosyl)‑3'‑dephosphocoenzyme‑A synthase |
| Reads supporting (aligned to +/- strand): ref base A (30/10); new base C (2/15); total (32/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.61e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCGCCGGTAAGGCCAAGCTGTTGGTACAACCGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTT‑GCCGCCGTAGAACAAACGGTTGTT‑GGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTTCAGTCAGCATGGCGCGCCAGCCCAGCAGGG > NC_000913/646974‑647445 | ggcccGGTAGGGCAAATGTTTTGGTACAACTGTGTCCCTGCCGTAGTTTGGAAATTATTGGTCGGCAGTCGGCGAGGGGTCAGGCCAGGGAAGAAACTT‑GCCGCCGTAGAACAAACGGTTGTT‑GGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCAc < 2:1073115/235‑1 (MQ=255) gCTGTTGGTACAACCGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTT‑GCCGCCGTAGAACAAACGGTTGTT‑GGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCCTACCa > 1:716778/1‑239 (MQ=255) gCTGTTGGTACAACCGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTT‑GCCGCCGTAGAACAAACGGTTGTT‑GGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCa > 1:176203/1‑239 (MQ=255) tGGTACAACCGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTT‑GCCGCCGTAGAACAAACGGTTGTT‑GGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCCGTGGCGCGGAACAAATCACCTTCGCAAGCCATACCAATTgg > 1:1007646/1‑239 (MQ=255) tGGTACAACCGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTT‑GCCGCCGTAGAACAAACGGTTGTT‑GGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTgg > 1:697561/1‑239 (MQ=255) tGGTACAACCGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTT‑GCCGCCGTAGAACAAACGGTTGTT‑GGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATAACCTTCGCAAGCCATACCAATTgg > 1:591756/1‑239 (MQ=255) ggTAAAACCTTTGACCTGCCGTCGGTGGTGAATTTTTGGTCCGCAGTTCGCGATCGGTCAGGCCACGGCAAAAATTT‑GCCGCCGTAGAACAAACGGTTGTT‑GGCGTTACCGGTTGGTTGAGTTGAAGCAACCGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAAt < 1:279826/235‑1 (MQ=255) cctgtgtcctggCCGTCGTTTGTAAATTATGGTGACGCAGTTGGGGTTCGGTCGGGCCACGGCAGAAACTT‑GCCGCCGTAGAACAAACGGTTGTT‑GGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCCCCTTCGCAAGCCATACCAATTGGGCGTAAt < 1:1082074/228‑1 (MQ=255) cGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTT‑GCCGCCGTAGAACAAACGGTTGTT‑GGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATCGCAGCCCTAAAGAAAAACTCCTGCCTTTATGCGTGTTTACGCCCGCAGGGGCCGGGAACATATCACCTTTCCAAGCCCTACCCATTTGGCGAAAccc > 2:52817/1‑239 (MQ=255) ttGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTT‑GCCGCCGTAGAACAAACGGTTGTT‑GGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGt > 1:401506/1‑239 (MQ=255) ttGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTT‑GCCGCCGTAGAACAAACGGTTGTT‑GGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCACTGGGGCGGAACAAATCACCTTCGCAAGCCATCCCAATTGGGCGGAACCCg > 2:279826/1‑238 (MQ=255) ttGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTT‑GCCGCCGTAGAACAAACGGTTGTT‑GGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGACGCCCTAAAGAAAAAAAGCTGCCTTTATGAGTTTTTAAGCCCCCACTGGCCGGGAAACAAACCCCTTCGCAAGCCCTACCAATTggcgggaagccgg > 2:717854/1‑228 (MQ=255) tGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTT‑GCCGCCGTAGAACAAACGGTTGTT‑GGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTg > 1:14685/1‑239 (MQ=255) gACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTG‑GCCGCCGTAGAACAAACGGTTGTT‑GGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTgg < 1:127690/239‑1 (MQ=255) gCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTT‑GCCGCCGTAGAACAAACGGTTGTT‑GGCGTTACCGGTTGGTTGAGTTGCAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCCGGTTTACGCCCGCAGTGGCGCGGAACAATTCCCCTTCCCAAGCCATACCAATTGGGCGTAATcctgggggac > 2:861205/1‑230 (MQ=255) gCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTT‑GCCGCCGTAGAACAAACGGTTGTT‑GGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATTCGTGTTTACGCCCGCAGTGGCACGGAAAATATCACCTTCGCAAGCCCTACCAATTGGGCTGAAACCGTGGAgaa > 1:441991/1‑236 (MQ=255) ttttgtgtccgcgGTTGGCGATGGGGAGGGCCAGGGCA‑AAACTTGGCCGCAGTAGAACAAACGGTTTTT‑GGCGTTCCGGGTTGTTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCAt < 1:318962/230‑1 (MQ=255) ttGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTT‑GCCGCCGTAGAACAAACGGTTGTT‑GGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCAttt > 1:98749/1‑238 (MQ=255) cgcgATCGGTCAGGCCACGGCAGAAACTT‑GCCGCCGTAGAACAAACGGTTGTT‑GGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGGTTTTCCGCCCGCAGGGGCCCGGAACATATCACCTTCGCAAGCCATCCCCATTGGGCGTAATCCGTGGGGTCCCCCTCCTGGTGCCATTTCCCCCCTAAAGGc > 2:86620/1‑238 (MQ=255) tgggtggggcccggggagaatttt‑GCCGGCTGAGAAAAAACGGTTGTT‑GGTGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCAAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCaaa < 2:98749/217‑1 (MQ=255) gTCAGGCCACGGCAGAAACTT‑GCCGCCGTAGAACAAACGGTTGTT‑GGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTc > 1:516768/1‑239 (MQ=255) gTCAGGCCACGGCAGAAACTT‑GCCGCCGTAGAACAAACGGTTGTT‑GGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCCCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTACACCGTGGAGTCCCGCTTCTGGTGCCATTTCCGCACCTCAGTCACCAAATTc > 1:825460/1‑239 (MQ=255) cccgggaaaaaccTT‑GCCGGCGTAAAAAAAAGGGTGGGG‑GGCGTTCCCGGTGGGTTGAGTGGAAGCAACCGGCCAATTGCCGCACATAGCAGCCCAAAAGAAAAAATGCTGCCTTTAGGCGTGTTTACGCCCGGAGGGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGaa < 2:716778/227‑1 (MQ=255) cccgggcaaaatcgtcccggctgaGAACAAACGGTTGTT‑GGCGTTACCGTGTGGTTGGGTTGAAGCAACCGGCCAATTGCCGCACATAGCACCCCTAAAGAAAAAATGCTGCTTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGaa < 2:313790/216‑1 (MQ=255) cccGGCAAAAACTT‑GCCGCCGTAGAACAAACGGTTGTT‑GGCTTTACCGGTTGGTTGAGTTGAAGAAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGaa < 1:761182/236‑1 (MQ=255) ggCAGAAACTT‑GCCGCCGTAGAACAAACGGTTGTT‑GGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACgg > 1:790885/1‑239 (MQ=255) cAGAAATTT‑GCCGCCGTAGAACAAACGGTTGTT‑GGCTTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCAAATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACggg < 1:730872/238‑1 (MQ=255) aaaaattttcccggcgGAGAACAACTGTTTGTG‑GGGGTTACTGGTTGGTTGAGTGGAAGCAAACGGCCACTTGCCGCACATAGCACCCCTAAAGAAAAAATGCTGCCTTTAGGGGTGGTTCCGCCCGCAGTGGCGGGGAACATATCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACggg < 2:1052370/228‑1 (MQ=255) aaaCTT‑GCCGCCGTAGAACAAACGGTTGTT‑GGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTgg > 2:626733/1‑180 (MQ=255) aaaCTT‑GCCGCCGTAGAACAAACGGTTGTT‑GGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTgg < 1:626733/180‑1 (MQ=255) aaaCTT‑GCCGCCGTAGAACAAACGGTTGTT‑GGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGtg > 1:218488/1‑237 (MQ=255) aaCGT‑GCCGCCGTAAAAAAAACGGTTGTG‑GGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCAAATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGGGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTagc < 1:197144/239‑1 (MQ=255) cttttgcctccggaaaaaaaGGGTTGTTGGGCTTTCCCGGGTGGTGATGTTGAACCAACCGGCCAATGCCCGCCCATAGCGGCCCTAAAGAAAAATGGCTGCCTTTATGCGGGTTTCCGCCCGCAGGGGCGCGTAACATACCCCTTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTagc < 2:572482/222‑1 (MQ=255) ccgccgTAGAACAAACGGTTGTT‑GGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGAAATCCGTGGAGTACCGCTTCTGGGGCCCTTTCCCACCTACAGGCACCAAATTCAATAAAACGGGGTAACCAGccc > 2:925676/1‑239 (MQ=255) ggttttttgtctttccgggttgtgtGAGTGAAAGCAACCGGCAAAGTGCCCCAAATAGCAGCCCTAAAGAAAAAATGCTGCTTTTCGGGGTTGTTACCCCCGCAGTGGCGCGGACAATTTCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAgcgcg < 2:176203/222‑1 (MQ=255) ggCGTTACCGGTTGGTTGAGTTGAAGCAAACCGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGCCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGACCCGCTTCTGGGTCCCTTTCCGCACTCCAGGACCCAAATTCAATGAAACGGGGTAGCCAGccccaaaaacccaagccgctgggggg > 2:465529/1‑216 (MQ=255) ttggttgAGTTGAAGCAACCGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTTTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTcc < 1:306667/238‑1 (MQ=255) tggtttggttGAACCAACCGGCCATTTGCCGTACAAAGCAGCCCTAAAGAAAAACTGCTGCCTTTATGCTTGTTTCCGCCCGCATGGGCGCGGAACATATCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCa < 1:757919/238‑1 (MQ=255) tgattgaaaGCAACGGGACATTGGCCGCACATGACAGCCATAAAAAAAAAATGCTGCTTTTTGGCGTTTTTCCGCCCGCGGTGGCGGGGATAATATCCCCTGCGAAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGcc < 2:1058094/232‑1 (MQ=255) tgagttgaAGAAAGCGGCAAATGGCCGCACAGAGCAGCCCAAAAGAAAAACGGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGcc < 1:465529/239‑1 (MQ=255) agttgaAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTAAAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCat > 1:1033245/1‑239 (MQ=255) cccagtcgccgccAATAGCCGCGCTAAAGAAAAATGTCGTCTTTTCGGGGTTTTTACCCCGGCAGTGGCGCGGACGTGATCGCCTCCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCAc < 2:497720/232‑1 (MQ=255) caatgcccGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGGGGCGCGGAAAATATCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCAcc < 1:659159/232‑1 (MQ=255) cGCACATAGCAGCCATAAAGAAAAAATGCTGCCTTTAGGCGTGTTTCCGCCCGCAGTGGCGCGGAACATATCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTaa < 1:861205/239‑1 (MQ=255) cacaTAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCCCCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATAGCCCACCCCGTCGGCGGGAAAACTTCCACCGCCATACCTTGTTGCGCACCCCAGTGaaag > 2:193197/1‑237 (MQ=255) cagcCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAACGCGCCGCGGGGGAAATCTTCCAGCGCCATATCTTTGTGCCCCCCGCAGTTAAtcggaccc > 2:83645/1‑231 (MQ=255) gcCCTAAAGAAAAAATGTTGCCTTGAGGCGTGTTTACCCCCGAGGGGGCGGGGAACTTTCCCCCTTGGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACg < 1:889892/239‑1 (MQ=255) ccTAAAGAAAAAAGGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAGTGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCAc < 1:845240/236‑1 (MQ=255) caaaaaGAAAAAATGCTGCCTTTAGGCGGTTTTACGCCCGCAGTGGCGCGGAACATATCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACg < 1:86620/234‑1 (MQ=255) aaGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATCCGATCCACGAgg > 1:904358/1‑236 (MQ=255) tttttgtcGTTTTTCCCCCCGGCGTGGCGCGGAACATTTCCCTTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGa < 2:1033245/232‑1 (MQ=255) tgtTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCCTATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGATTCGGTGCAAGATTGGCTtca > 1:860598/1‑239 (MQ=255) tgtTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTtca > 1:908414/1‑239 (MQ=255) tgtTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTtc > 1:264924/1‑238 (MQ=255) tgtTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAACCGTCCACAGCCATATCTTTGTGCCCACCCCAGTTAAGTCGCTCCCCGAGCCCTGGTTCCGGTGACAGAtgtacgtca > 1:649825/1‑231 (MQ=255) tttACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCAGATCTTTGTGCGACCCCCAGTTAATGCGATCCACGGGGCCAGGTTTCGGTGAAAGAATGACCtcgga > 2:160168/1‑236 (MQ=255) gcgcGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGCGGCCTGGt > 1:129623/1‑201 (MQ=255) atCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACAAGGCCTGGTTTCGGTGACAGATTGCCTTCAGTCAGCTTTGCGCGCCAGCCCAGCCggg > 1:862440/1‑239 (MQ=255) | GCGCCGGTAAGGCCAAGCTGTTGGTACAACCGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTT‑GCCGCCGTAGAACAAACGGTTGTT‑GGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTTCAGTCAGCATGGCGCGCCAGCCCAGCAGGG > NC_000913/646974‑647445 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |