| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 762,113 | T→C | 23.7% | S198P (TCC→CCC) | sucB → | dihydrolipoyltranssuccinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 762,113 | 0 | T | C | 23.7% | 112.8 / 7.0 | 65 | S198P (TCC→CCC) | sucB | dihydrolipoyltranssuccinase |
| Reads supporting (aligned to +/- strand): ref base T (34/14); new base C (3/14); total (37/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.89e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGCCTGCTGGCTGAACACAATCTCGACGCCAGCGCCATTAAAGGCACCGGTGTGGGTGGTCGTCTGACTCGTGAAGATGTGGAAAAACATCTGGCGAAAGCCCCGGCG‑AAAGAGTCTGCTCCGGCAGCGGCTGCTCCGGCGGCGC‑AACCGGCTCTGGCTGCACGTAGTGAAAAA‑CGTGTCCCGATGACT‑CGCCTGCGTAAGCGTGTGGCAGAGCG‑TCTGCTGGAAGCGAAAAA‑CTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGTCAGCATGGCGGT > NC_000913/761879‑762339 | cGCCTGCTGGCTGAACACAATCTCGACGCCAGCGCCATTAAAGGCACCGGTGTGGGTGGTCGTCTGACTCGTGAAGATGTGGAAAAACATCTGGCGAAAGCCCCGGCG‑AAAGAGTCTGCTCCGGCAGCGGCTGCTCCGGCGGCGC‑AACCGGCTCTGGCTGCACGTAGTGAAAAA‑CGTGTCCCGATGACT‑CGCCTGCGTAAGCGTGTGGCAGAGCG‑TCTGCTGGAAGCGAAAAA‑CTCCa > 1:255286/1‑238 (MQ=255) gctggctgAACACAATCTCGACGCCAGCGCCATTAAAGGCACCGGTGTGGGTGGTCGTCTGACTCGTGAAGATGTGGAAAAACATCTGGCGAAAGCCCCGGCG‑AAAGAGTCTGCTCCGGCAGCGGCTGCTCCGGCGGCGC‑AACCGGCTCTGGCTGCACGTAGTGAAAAA‑CGGGTCCCGATGACT‑CGCCTGCGTAAGCGTGTGGCAAAGGG‑GCTGCTGGAAGCGAAAAA‑CCCCACCGCCa > 1:791606/1‑239 (MQ=255) tctcGACGCCAGCGCCATTAAAGGCACCGGTGTGGGTGGTCGTCTGACTCGTGAAGATGTGGAAAAACATCTGGCGAAAGCCCCGGCG‑AAAGAGTCTGCTCCGGCAGCGGCTGCTCCGGCGGCGC‑AACCGGCTCTGGCTGCACGTAGTGAAAAA‑CGTGTCCCGATGACT‑CGCCTGCGTAAGCGTGTGGCAACGCG‑TCGGCTGGAAGCGAAAAA‑CCCCACCGCCATGCTGACCACGTTCa > 1:785036/1‑239 (MQ=255) gagccgggcgcCATGAAAGGCAGGGGGGGGGGTGGTCGGCGGACGGGTAAGGTGGGGGAAAAACGTGGGGGGAAAGCCCCGGGG‑AAAAGGTCTGCTCGGGTGCGGGCTGCCCCGGCGGCGC‑AACGGGCGCTGGCTGCAAGTAGTAAAAAA‑CGGGTCCGGTGGACG‑CCCCTGCGTAAGCGGGTGGCAGAGAG‑TCTGCGGGAAGGAAAAAC‑CTCCACCGCCATGCTGACCACGTTCAACGa < 2:578277/232‑1 (MQ=255) aCGCCAGCGCCATTAAAGGCACCGGTGTGGGTGGTCGTCTGACTCGTGAAGATGTGGAAAAACATCTGGCGAAAGCCCCGGCG‑AAAGAGTCTGCTCCGGCAGCGGCTGCTCCGGCGGCGC‑AACCGGCTCTGGCTGCACGTAGTGAAAAA‑CGGGTCCCGATGACC‑CGCCTGCGTAACCGGGTGGCAGAGCG‑GCGGCTGGAAGCGAAAAA‑ATcccccccctaccgcaacccctccaaccaa > 2:632676/1‑218 (MQ=255) aGCGCCATTAAAGGCACCGGTGTGGGTGGTCGTCTGACTCGTGAAGATGTGGAAAAACATCTGGCGAAAGCCCCGGCG‑AAAGAGTCTGCTCCGGCAGCGGCTGCTCCGGCGGCGC‑AACCGGCTCTGGCTGCACGTAGTGAAAAA‑CGTGTCCCGATGACT‑CGCCTGCGTAAGCGTGTGGCAGAGCG‑TCTGCTGGAAGCGAAAAA‑CTCCACCGCCATGCTGACCACGTTAAACGAAGTCaa > 1:663723/1‑239 (MQ=255) ttAAAGGCCCGGGGGGGGGGGGGGGTCTGACTCGGGAAGGTGTGGAAAACCAGCTGGGGAAACCCCTGGGG‑AAAGGGGCTGCTCCGGCAGGGGCTGC‑CCGGGGGGGCAAACCGGCTCTGGCTGACGGGAGGGAAAAA‑GGTGTCCCGATGACT‑CGCCTGGTTAAGCGTGTGGCAGAGCG‑TCTGCTGGAAGCGAAAAA‑CTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAg < 2:279600/239‑1 (MQ=255) agcccccgggtggggtggTCCTCTGACGCGGGAAGGTGTGGAAAAAAATCGGGCGAAAGCCCCGGCG‑AAAGGGTCTGCTCGGGCAGGGGCTGCTCCGGCGGCGC‑ACCCGGCTCTGGCGGCACGTAGTGAAAAA‑CGTGTCCCGATGACT‑CGCCTGCGTAAGCGTGTGGCAGAGCG‑TCTGCGGGAAGCGAAAAC‑CCCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGa < 2:1069343/227‑1 (MQ=255) aCCGGTGTGGGTGGTCGTCTGACTCGTGAAGATGTGGAAAAACATCTGGCGAAAGCCCCGGCG‑AAAGAGTCTGCTCCGGCAGCGGCTGCTCCGGCGGCGC‑AACCGGCCCTGGCTGCACGTAGTGAAAAA‑CGTGTCCCGATGACT‑CGCCTGCGGAAGCGTGGGGCAGAGCG‑TCTGCTGGAAGCGAAAAA‑CTCCACCGCCATGCGGACCACGTTCAACGAAGTCAAAAAAAAGCCGAtttg > 2:1030460/1‑237 (MQ=255) cGGTGTGGGTGGTCGTCTGACTCGTGAAGATGTGGAAAAACATCTGGCGAAAGCCCCGGCG‑AAAGAGTCTGCTCCGGCAGCGGCTGCTCCGGCGGCGC‑AACCGGCTCTGGCTGCACGTAGTGAAAAA‑CGTGTCCCGATGACT‑CGCCCGCGTACACGGGTGGCAGAGCG‑TCCGCTGGAAGCGAAAAA‑CCCCACCGCCATGCTGACCAACTCTAACAAAGTCAACAAAAAACCGATTAAgg > 2:186625/1‑239 (MQ=255) ggTGTGGGGGGTCGTTTGACCCGGGAAGATGGGGAAAAACATCGGGCGAAAGCCCGGGCG‑AAAGAGTCTGCTCCGGCAGCGGCTGCTCCGGCGGCGC‑AACCGGCTCTGGCTGCACGTAGTGAAAAA‑CGTGTCCCGATGACT‑CGCCTGCGTAAGCGTGTGGCAGAGCG‑TCTGCTGGAAGCGAAAAA‑CTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGa < 1:557240/239‑1 (MQ=255) tgggtggTCGTCTGACTCGTGAAGATGTGGAAAAACATCTGGCGAAAGCCCCGGCG‑AAAGAGTCTGCTCCGGCAGCGGCTGCTCCGGCGGCGC‑AACCGGCTCTGGCTGCACGTAGTGAAAAA‑CGTGTCCCGATGACT‑CGCCTGCGTAAGCGTGGGGCAGAGCG‑TCTGCTGGAAGCGAAAAA‑CTCCACCGCCATGCTGACCACGTTCAACGAAGTCAAAAGGAAGCCGATTTAGGAACTg > 2:672196/1‑239 (MQ=255) tgggtggTCGTCTGACTCGTGAAGATGTGGAAAAACATCTGGCGAAAGCCCCGGCG‑AAAGAGTCTGCTCCGGCAGCGGCTGCTCCGGCGGCGC‑AACCGGCTCTGGCTGCACGTAGTGAAAAA‑CGCGTCCCGATGACT‑CGCCTGCGTAAGCGTGTGGCAGAGCG‑TCTGCTGGAAGCGAAAAA‑CTCCACCGCCATGCTGCCCACGTTCAACGAAGTCAACATGAAGCCGATTATGGAttt > 1:892543/1‑236 (MQ=255) tcgtcTGACTCGTGAAGATGTGGAAAAACATCTGGCGAAAGCCCCGGCG‑AAAGAGTCTGCTCCGGCAGCGGCTGCTCCGGCGGCGC‑AACCGGCTCTGGCTGCACGTAGTGAAAAA‑CGTGTCCCGATGACT‑CGCCTGCGTAAGCGTGTGGCCGAGGG‑TTCGCTGGAAGCGCAAAA‑CTCCACCGCCATCCTGACCACGTTCAACGAAGTCAACATGAACCCCACTTTGGCTCTCCGaaaac > 2:987396/1‑237 (MQ=255) ccgtcTGACTCGTGAAGATGTGGAAAACCATCGGGCGAAAGCCCCGGCG‑AAAGAGTCTGCCCCGGCAGCGGCTGCTCCGGCGGCGC‑AACCGGCTCTGGCTGCACGTAGTGAAAAA‑CGTGTCCCGATGACT‑CGCCTGCGTAAGCGTGTGGCAGAGCG‑TCTGCTGGAAGCGAAAAA‑CCCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAg < 1:591202/237‑1 (MQ=255) cgtcTGACTCGTGAAGATGTGGAAAAACATCTGGCGAAAGCCCCGGCG‑AAAGAGTCTGCTCCGGCAGCGGCTGCTCCGGCGGCGC‑AACCGGCTCTGGCTGCACGTAGTGAAAAA‑CGTGTCCCGATGACT‑CGCCTGCGTAAGCGTGTGGCAGAGCG‑TCTGCTGGAAGCGAAAAA‑CTCCACCGCCATGCTGCCCACGTTCAACGCAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCa > 1:919220/1‑239 (MQ=255) cgtcTGACTCGTGAAGATGTGGAAAAACATCTGGCGAAAGCCCCGGCG‑AAAGAGTCTGCTCCGGCAGCGGCTGCTCCGGCGGCGC‑AACCGGCTCTGGCTGCACGTAGTGAAAAA‑CGTGTCCCGATGACT‑CGCCTGCGTAAGCGTGGGGCAGAGCG‑TCTGCTGGAAGCGAAAAA‑CTCCCCCGCCATGCTGCCCCCGTTCACAGAAGTCAACATGAAACCGATAATGGAATTCGGTAAGCa > 2:840842/1‑239 (MQ=255) tGAAGATGTGGAAAAACATCTGGCGAAAGCCCCGGCG‑AAAGAGTCTGCTCCGGCAGCGGCTGCTCCGGCGGCGC‑AACCGGCTCTGGCTGCACGTAGTGAAAAA‑CGTGTCCCGATGACT‑CGCCTGCGTAAGCGTGTGGCAGAGCG‑TCTTCTGGAAGCGAAAAA‑CTCCACCGCCATGCTGACCACGTTAAACGAAGTCACAATGAAGCCGATTAAGGATCTGCGTAAACAGAAAGGGGAAg > 2:65344/1‑239 (MQ=255) gtgGAAAAACATCTGGCGAAAGCCCCGGCG‑AAAGAGTCTGCTCCGGCAGCGGCTGCTCCGGCGGCGC‑AACCGGCTCTGGCTGCACGTAGTGAAAAA‑CGTGTCCCGATGACT‑CGCCTGCGTAAGCGTGTGGCAGAGCG‑TCTGCTGGAAGCGAAAAA‑CTCCACCGCCATGCTGAc > 2:336693/1‑173 (MQ=255) ggggAAAAACATCTGGCGAAAGCCCCGGCG‑AAAGAGTCTGCTCCGGCAGCGGCTGCTCCGGCGGCGC‑AACCGGCTCTGGCTGCACGTAGTGAAAAA‑CGTGTCCCGATGACT‑CGCCTGCGTAAGCGTGTGGCAGAGCG‑TCTGCTGGAAGCGAAAAA‑CTCCACCGCCATGCTGAc < 1:336693/171‑1 (MQ=255) acctCTGGGGAAAACCCCGGGGAAAAGGGTCTCCCCGGGCAGGGGCTGCCCGGGGGGCGC‑AACCGGCTTTGGCTGCACGTAGTGAAAAA‑CGTGTCCCGATGACT‑CGCCTGCGTAAGCGTGTGGCAGGGCG‑TCTGCTGGAAGCGAAAAA‑CTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGc < 2:255286/236‑1 (MQ=255) cctggggagAAACCCCGGGGG‑AAGGGGCCTGCCCGGGCGGGGGTGGCGCCGGGGGCCA‑ACCCGGCTGTGGTGGCAGGGAGGGAAAAC‑CGTGTGCCGATGACC‑CCCCTGCGAAGGGGGGGGGCAGAGTG‑TCTGCGGGAAGGGAAAAA‑CCCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCa < 2:148130/231‑1 (MQ=255) ggCGAAAGCCCCGGCG‑AAAGAGTCTGCTCCGGCAGCGGCTGCTCCGGCGGCGC‑AACCGGCTCTGGCTGCACGTAGTGAAAAA‑CGGGTCCCGATGACT‑CGCCTGCGTAAGCGTGTGGCAGAGCG‑TCTGCTGGAAGCGAAAAA‑CTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACCTGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGCAAAAAGCCACGGc > 1:643033/1‑238 (MQ=255) aGCCCCGGCG‑AAAGCGTCTGCTCCGGCAGCGGCTGCTCCGGCGGCGC‑AACCGGCTCTGGCTGCACGTAGTGAAAAA‑CGTGTCCCGATGACT‑CGCCTGCGTACGCGTGGGGCAGAGCG‑CCTGCTGGAAGGGAAAAA‑CTCCCCCCCCATGCTGGCCCCGTTCACCGAAGTCAACATAAAGCCGACTATGGACTTGCGTACACAGAACGGTAAAACGTTTGAAAAACCCCAAGGCATCCGTc > 2:62515/1‑239 (MQ=255) cGGCG‑AAAGAGTCTGCTCCGGCAGCGGCTGCTCCGGCGGCGC‑AACCGGCTCTGGCTGCACGTAGTGAAAAA‑CGTGTCCCGATGACT‑CGCCTGCGTAAGCGTGTGGCAGAGCG‑TCTGCTGGAAGCGAAAAA‑CTCCCCCGCCATGCTGACCCCGTTCAACGAAGCCAACATGAAGCCGATTAAGGATCTGCGTAAGCAATACGGGAAAGCGTTTGAAAAAACCCACGGACACCGCCTgggg > 2:482241/1‑238 (MQ=255) aagtggtttGCCCCGGGAGGGGTTGCTCGGGGGGCGC‑ACCCGGGTCGGGCGGCGCGTGGTGAAAAC‑CGGGTCCGGATGACT‑CGCCTGCGTAAGGGTGGGGCAGGTCG‑TCTGCTGGAAGCAAAAAA‑CTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTAt < 2:1044712/231‑1 (MQ=255) aagggttcgctcgggcgggggtggctCCGGGGGCAC‑AACGGGCCTTGGTGGCCCGTGGTGAAAAA‑CGTGTCCCGATGCCT‑CGCCTGGGTAGGGGTGGGGCAGGGCG‑TCTGTGGAAAGAAAAAAA‑CCCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATg < 2:83806/216‑1 (MQ=255) tggtgttGCGCCGGCGGGGGGTCCGCCGGGTGCGC‑ACCCGGGTCTGGCGACAGGGTGGGAAAAA‑CGTGTCCGGATAACT‑CGCCTGCGTAGGCTTGGGGCAGGGCT‑TCGGGTGGAAGCGAAAAA‑CCCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGt < 2:405339/233‑1 (MQ=255) tGCTCCGGCAGCGGCTGCTCCGGCGGCGC‑AACCGGCTCTGGCTGCACGTAGTGAAAAA‑CGTGTCCCGATGACT‑CGCCTGCGTAAGCGTGTGGCAGAGCG‑TCTGCTGGAAGCGAAAAA‑CTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACCTGAAGCCGATTATGGTTCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCCCGGCAACCGCCTGGGCTTTATGTCCTTc > 1:899380/1‑238 (MQ=255) gCAGCGGCTGCTCCGGCGGCGC‑AACCGGCTCTGGCTGCACGTAGTGAAAAA‑CGTGTCCCGATGACT‑CGCCTGCGTAAGCGTGTGGCAGAGCG‑TCTGCTGGAAGCGAAAAA‑CTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGt > 1:13009/1‑213 (MQ=255) ggCTGCTCCGGGGGCGC‑ACCCGGCTCTGGCTGCACGTAGTGAAAAA‑CGTGTCCCGATGACT‑CGCTTGCGTAAGCGTGTGGCAGAGCT‑TCTGCTGGAAGCGAAAAA‑CTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCg < 1:632676/238‑1 (MQ=255) gcggcgC‑AACCGGCTCTGGCTGCACGTAGTGAAAAA‑CGTGTCCCGATGACT‑CGCCTGCGTAAGCGTGTGGCAGAGCG‑TCTGCTGGAAGCGACAAA‑CTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAACGTTTGAAAAACGCCCCGCCATCCGTCCGGGGTTCAAGCCCTTCAACCGGGAAGAGGGGGTTGGAg > 2:575825/1‑238 (MQ=255) c‑AACCGGCTCTGGCGGCCCGTAGTGAAAAA‑CGTTTCCCGATGTCC‑CGCCTGCGTAAGCGTTTGGCAGGGCG‑TCTGCTGGAAGCGAAAAA‑CCCCCCCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGa < 1:220150/238‑1 (MQ=255) cgggtccggtcggatgggaGTAAAAAC‑CGTGTCCCGTTGACC‑GCCCTGGTTAGGGGGGGGGCAGAGCG‑GTTGCGGAAAGCGAAAAC‑TCCCACCGCCATGCTGACCACGTTCAACGAAGGCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACg < 2:643033/221‑1 (MQ=255) ccGGCTTTGGCTGCACGTAGTGAAAAA‑CGTGTCCAGATGACT‑CGCCTGCGTAAGCGTGGGGCAGAGCG‑TCGGCTGGAAGCGAAAAA‑CCCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACg < 1:65344/239‑1 (MQ=255) gctggcgtgccGTAGTGAAAAA‑CGTGTCCCGAGGCCC‑CGCCTGCGTAGGCGTGTGGCAGAGCG‑TCTGCTGGAAGCGAAAAA‑CTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTAcc < 1:305315/229‑1 (MQ=255) cgtgCTCCACCTGGTGAAAAA‑CGTGTCTCCGTGACTCCGCCGCCGTAGGCGGGGTGAAGTGCT‑CTTGCTGAAACCAAAAAC‑CCCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTAcc < 2:31711/236‑1 (MQ=255) ggCACGTA‑TGAAAAAGCGTGCCCCGAGGACT‑CGCCTGCGTAAGCGTGTGGCAGAGCG‑TCTGCTGGAAGCGAAAAA‑CTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGaa < 1:184709/237‑1 (MQ=255) aCGTAGTGAAAAA‑CGTGTCCCGATGACT‑CGCCTGCGTAAGCGTGTGGCAGAGCG‑TCTGCTGGAAGCGAAAAA‑CTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCCTCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGGGGTTGAAGCCCCGAAACGTTACCCGGaaagga > 2:66233/1‑235 (MQ=255) aCGTAGTGAAAAA‑CGTGTCCCGATGACT‑CGCCTGCGTAAGCGTGTGGCAGAGCG‑TCTGCTGGAAGCGAAAAA‑CTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAACGGTGGTTGAAGCCCTGAAActgcctcttataaac > 1:316263/1‑224 (MQ=255) acggggaaaaag‑CTTGTCCCGTTGTCT‑CGCCTGTGTACGCGGGGGGACGGGCG‑TCTGCTTGAACCAAAAAC‑CCCGCCCGCCATGCTGACCACGTTCAACGAAGGCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGaa < 2:338410/232‑1 (MQ=255) tAGTGAAAAA‑CGTGTCCCGATGACT‑CGCCTGCGTAAGCGTGTGGCAGAGCG‑TCTGCTGGAAGCGAAAAA‑CTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCATCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAACCGTTACCCGCAAGTGAAc > 1:58803/1‑238 (MQ=255) gagaaaaac‑CGGGTCCCGATGCCT‑CGCCTGCGTAAGCGTGTGGCAGAGCG‑TCTGCTGGAAGCGAAAAA‑CCCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGaa < 1:672196/232‑1 (MQ=255) gTGAAAAA‑CGTGTCCCGATGACT‑CGCCTGCGTAAGCGTGTGGCAGAGCG‑TCTGCTGGAAGCGAAAAA‑CTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGGGGTTGAAGCCCGGAAACGTTACCCGGAAGTGAACg > 2:532025/1‑237 (MQ=255) aaggagaccggcccagATGACT‑CGCTGGGGGAAGCGTGTGAGAAAGCG‑TCGGGGGGAA‑CGAAAAACCTCCGCCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCtt < 1:482947/224‑1 (MQ=255) cGTGCCCCGATGACT‑CGCCTGCGTAAGCGTGTGGCAGAGCG‑TCTGCTGGAAGCGAAAAA‑CCCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGa < 1:972189/239‑1 (MQ=255) gtCCCGATGACT‑CGCCTGCGTAAGCGTGTGGCAGAGCG‑TCTGCTGGAAGCGAAAAA‑CTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGaa > 1:302645/1‑224 (MQ=255) gtCCCGATGACT‑CGCCTGCGTAAGCGTGTGGCAGAGCG‑TCTGCTGGAAGCGAAAAA‑CTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGGTTGTATc > 1:338410/1‑234 (MQ=255) gtCCCGATGACT‑CGCCTGCGTAAGCGTGTGGCAGAGCG‑TCTGCTGGAAGCGAAAAA‑CTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGGGGTTGAAGCCCGGAAACGTTACCCGGAAGGGAACCCTCCTATCGACgg > 2:131859/1‑239 (MQ=255) gtCCCGATGACT‑CGCCTGCGTAAGCGTGTGGCAGAGCG‑TCTGCTGGAAGCGAAAAA‑CTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGACGGGGCTTTATGTACTTCTACTGGAAAGCGGGGGGTGCAGCCCTGAAACGTTACCCGAAAGGGaaagactcaataaaagg > 2:203218/1‑224 (MQ=255) gtCCCGATGACT‑CGCCTGCGTAAGCGTGTGGCAGAGCG‑TCTGCTGGAAGCGAAAAA‑CTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATGATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGCCTGGGTTTTATGTCCTCCTACGTGAAACGGGGGGTTGAAACCCTAAAACGTACCCCGGaacgaaacgatgaataagaggg > 2:458988/1‑219 (MQ=255) gACT‑CGCCGGGGGAAGCGTGTGGAAG‑GCGTTCTGCTGGAAGCGAAAAA‑CTCCACCGCCATGCTGAACACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACg < 1:1005395/239‑1 (MQ=255) aCT‑CCCCTGGATAAGGGTGGGGCAGGGGG‑TGTGGTGGAAGCGAAAAC‑CTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACg < 1:131859/238‑1 (MQ=255) t‑CGCCTGCGTAAGCGTGTGGCAGAGCG‑TCTGCTGGAAGCGAAAAA‑CTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGGGGTTGAACCCCTGAAACGTTACCCGAGAGGGAACGCTTCTATCGAGGGcctggccctta > 2:482947/1‑229 (MQ=255) t‑CGCCAGCGGAGGGGTGTGGC‑GGGCGTTCTGCTGGAAGCAAAAAC‑CCCCACCGCCATGCTGACCAAGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTgg < 1:62515/239‑1 (MQ=255) gCCTGCGAAAGCGTGGGGGAGGGCG‑TCTGCTGGAAGCGAAAAA‑CTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGtt < 1:232959/239‑1 (MQ=255) tgGCAGAGCG‑TCTGCTGGAAGCGAAAAA‑CTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCttt < 1:123041/140‑1 (MQ=255) tgGCAGAGCG‑TCTGCTGGAAGCGAAAAA‑CTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCttt > 2:123041/1‑140 (MQ=255) tgGCAGAGCG‑TCTGCTGGAAGCGAAAAA‑CTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATTACGTGGTTTACCACAACTATTTc > 1:148481/1‑239 (MQ=255) tgGCAGAGCG‑TCTGCTGGAAGCGAAAAA‑CTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTc > 1:178470/1‑239 (MQ=255) tgGCAGAGCG‑TCTGCTGGAAGCGAAAAA‑CTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGGGAAAGCGGGGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGGCGGGGGGTACGGGGTTTACACAAACAATTTc > 2:874959/1‑239 (MQ=255) agCG‑TCTGCTGGAAGCGAAAAA‑CTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACTTGGTTTACCCCAACTATTTCGACGTc > 1:715360/1‑239 (MQ=255) tCTGCTGGAAGCGAAAAA‑CTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGGGGTTTACCACAACTATTTCGACGTCAGCa > 1:631313/1‑239 (MQ=255) tgtaggAAGCAAAACA‑CCCCACCGCCATGCTGACCACGTTAAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGTCAGCATg < 1:790920/235‑1 (MQ=255) gAAGCGAAAAA‑CTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGTCAGCATGGCggg > 1:214603/1‑238 (MQ=255) | CGCCTGCTGGCTGAACACAATCTCGACGCCAGCGCCATTAAAGGCACCGGTGTGGGTGGTCGTCTGACTCGTGAAGATGTGGAAAAACATCTGGCGAAAGCCCCGGCG‑AAAGAGTCTGCTCCGGCAGCGGCTGCTCCGGCGGCGC‑AACCGGCTCTGGCTGCACGTAGTGAAAAA‑CGTGTCCCGATGACT‑CGCCTGCGTAAGCGTGTGGCAGAGCG‑TCTGCTGGAAGCGAAAAA‑CTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGTCAGCATGGCGGT > NC_000913/761879‑762339 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |