| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,538,334 | T→G | 15.3% | T174P (ACC→CCC) | narY ← | nitrate reductase 2 (NRZ), beta subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,538,334 | 0 | T | G | 15.3% | 143.8 / 2.0 | 73 | T174P (ACC→CCC) | narY | nitrate reductase 2 (NRZ), beta subunit |
| Reads supporting (aligned to +/- strand): ref base T (19/38); new base G (12/3); total (32/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.46e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTGGCCCCCAGATCACTTTGTCCATCCGTTTGCCGTCAATCAGTGAACGCGGGCGAGCAGTAGGAATATGTTTGCCTTCCG‑GTGCGCTATGCAAATGTTCGTAGTCGAAGGTGAAAGGTTCGTAGTAATCATCAATCTG > NC_000913/1538104‑1538568 | atttggTGGGAAACAGTAATTTCTTTTTTCTGACTTGCCGTTTTTCAAGTTGAAGTGGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCCGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCaa < 2:508643/234‑1 (MQ=255)aaTTTGGGGGTAATAGAAGATGCTTTTTTCTGACTTGCCGCTTTTCCAGTGGAAGTAGATTTTGTTGGACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCaa < 2:500288/239‑1 (MQ=255) tttCGTGGGTAACAGAATGTCCATTTTTCTGACTTGCCGGTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCCCAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCCCAGGCGCGGCAGGTACATCATGAAGGTGTTTTCaaa < 2:891118/238‑1 (MQ=255) gTGGGTAACGAGATATGCATTTTTCTGACTTGCCTTTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGc < 1:421018/239‑1 (MQ=255) tAACAGAATGGGCATTTTTTCGGGTTACCTCTTTTCCAGTTGAAGTGTATTTTTTTTGCAGGAAACCCGCTTATGCACAAACGCCAGCCGCGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCGCGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGt < 2:902779/238‑1 (MQ=255) tAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACCATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGGGGCAGGAGCATCCTGAAGGGGTTTTCAACCTGccccgc > 1:441407/1‑236 (MQ=255) agtttctttttttgggcTTGCCGGTTTTCCAGTTAAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGGTCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACAt < 2:932282/219‑1 (MQ=255) agaTGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACAt < 1:350382/235‑1 (MQ=255) gaTGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGGGTTTTCAACATACCCGTACATCTCCt > 1:38930/1‑239 (MQ=255) ttttttTGATTTTCCGTTTTTCCAGTTTAAGTAGATTTTTTTGTCAGGACAACCGCTTAGGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGGCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCa < 2:854452/239‑1 (MQ=255) tttttGTGACTGGCCGCTTTTCCAGTTGAAGTAGATTTTTTTTGACGGACCACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCa < 1:442489/239‑1 (MQ=255) tttttCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCa < 2:660605/239‑1 (MQ=255) ttttcttgtcttgcgttttttCCATTTGAAGTAGATTTTTTTTTCCGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCGTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCa < 2:472639/222‑1 (MQ=255) tttCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGGACATACGTAAGGGGTTTTCCAACCACCCGGCAATCCCCTTTTGCGTg > 2:811812/1‑239 (MQ=255) aCTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGGGTTCGCACAGGGCGGGCAGGGACATCATGAAGGGGTTTTCAAACTGCCCGGCAAACCCCTTTTGAATgggccgg > 2:314050/1‑234 (MQ=21) tttCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATAATGAAGGGGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCgg > 1:924550/1‑238 (MQ=255) ttttGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGCTTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACACCCTGACGGGGTTTTTCAACTGCCCGTACATCTCCTTTTTCTAGGCCCCGAAG‑TGCGGGCG‑Cgggggccggttttgtaac > 2:259565/1‑224 (MQ=255) cAACCGCTTATGCACAAACGCCAGCCACGGCATTTAACCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCGTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCcag < 1:254989/239‑1 (MQ=255) gCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGAACATCATGAAGGTGTTTTCAAACTGCCCCTACATCTCCTTTTTCATGGCCTCGAAGTTTGGGGCG‑CGGGCCCTGTTTTCGAAATCACCGCCCACCAAGTCTTccc > 2:476612/1‑239 (MQ=255) acaAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGGTTTCAAACTGCCCGTCCATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCC‑TGGGCACGTTTTTCGCACCCACCGCCCCGCAGTTTTTCCCAg > 1:950144/1‑239 (MQ=255) aCGCCCTCCACGGCCTTTATCCATATCAATCAGGAAAATGCGGGCTTCTGCGGGTTTGTGGATCGTGCCGCTTGGGCCGGGCGCCACGCAGCTGGAATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTg < 2:738621/239‑1 (MQ=255) aCGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGGGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCCCGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCCGGTTg > 1:356018/1‑239 (MQ=255) gccagcctCGGCATTTATCCTGATCAATCAGCACAAGGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTGGc < 1:314050/239‑1 (MQ=255) cagccaCGGCATTTATCCTGATCAATCAGCAAAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTGGccc < 1:189276/239‑1 (MQ=255) cagccaCGGCATTTAACCTGATCAATCAGCCCAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTGGccc < 1:259565/239‑1 (MQ=255) tttgatccttgataagcggCACAAGTCCGTCTTCGTTGCGTTTTGAGATGGCGCCGGTTGGGCAGGTCGCCGCGCAGCTGGGATGGAGGCAGGGTTCGCACAGGCGAGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTGGCCCCCAGATCACt < 2:214693/221‑1 (MQ=255) ttATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGGACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGGACTCACCGCCCCGCAGTTCTTCCCAGTTTGGCCCCCAGATCACttt > 1:80880/1‑239 (MQ=255) cTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCCTTTGCATGTCCTCGAAGTTGCGGGCG‑CGGGCACGGTTTTCGAACTCACAGCCCGGCAGTTCTTCCCCGTTTGGCCCCCAGATCCCttttgcc > 1:994074/1‑234 (MQ=255) gATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGCAGGGGTTTTCAAACTGCCCTGACATCTGCTTTTTCATGGCCTCGCAGTTGCGGTCG‑CCGGCCCGGTTTTCGGACTCCCCCCCCAGCAGTTCTTCCCCGTTTTGCCCCCAGAACaacttggccctc > 2:587817/1‑228 (MQ=255) gATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGGGTTTTCAAACTGCCCGTACCTCCCCTGTTGCCGGGCCCCGAAG‑TGTCGTCGTCGGGCAGGTTTTTTGACCTAACCCCCCACCAGTTTTTCCCCTTTTGGccccacgacacctttgtcatc > 2:1078017/1‑221 (MQ=255) gATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGGGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCC‑CGGGCCCGTTTTTCGAACTTCCCCCCCCACAGGTTTTTCCCGTTTGGCCCCCAGAACACTTTGGCCATc > 2:592412/1‑239 (MQ=255) atcaatcaGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGGGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGGTTGGCCCCCAGATCACTTTGTcactcc > 1:430720/1‑234 (MQ=255) tcaGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGGGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTAGCGGTTG‑CGGGCACGTTTTTCGAACTTACCACCCACCAGGTCTTCCCAGTTTTGCACCCAGATCACTTTTGCCCTCCGttt > 1:687262/1‑238 (MQ=255) tcaGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGGACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑GGGGCACGTTTTTCGAACTCACCGCCCGGCAGTTCTTCCCATTTTGGCCCCCGGGTAACTTTTTCCATCCGttt > 1:1077896/1‑238 (MQ=255) ccatcccGTCTTCTTCGCGTTTGTAGATAGCGCCGCTGGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTGGCCCCCAGATCACTTTGTCCATCCGTTTGCCGTCa < 2:924550/234‑1 (MQ=255) cggtttcttcGCGTTTGTAGATAGTGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTGGCCCCCAGATCACTTTGTCCATCCGTTTGCCGTCAATCa < 1:637326/233‑1 (MQ=255) tcttctTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCGGCAGTTCTTCCCAGTTTGGCCCCCCGATCACTTTGTCCATCCGTTTGCCGTCAATCAGTGa > 1:756293/1‑239 (MQ=255) tcttctTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTGGCCCCCAGATCACTTTGTCCATCCGTTTGCCGTCAATCAGTGa > 1:419189/1‑239 (MQ=255) ttacgcgTTTGTAGATTGCCCCGGTTTGGCGGGGCACCCGGCAGGTGGGATGGAGGCAGTGGTCGCACAGGGCCGGCGGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAATTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTGGCCCCCAGATCACTTTGTCCATCCGTTTGCCGTCAATCAGTGAAcgc < 2:160296/236‑1 (MQ=255) ttcGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGCTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATTGCCTCGCAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTTACAGTTTGGCCCCCAGATCACTTTGTCCATCCGTTTGCCGTCAATCAATGAActcg > 1:572760/1‑239 (MQ=255) cggttGTAGTTGGCGGCGGTTGGGAAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTGGCCCCCAGATCACTTTGTCCATCCGTTTGCCGTCAATCAGTGAACGCGGGCg < 1:582333/236‑1 (MQ=255) gTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTGGCCCCCAGATCACTTTGTCCATCCGTTTGCCGTCAATCAGTGAACGCGGGCgg > 1:633601/1‑238 (MQ=255) ttgtgtaaggcgcCGGTGGGGCGGGGTGCACCGCAGCGGGGTTTGGGGCAGTGGTCTCACAGGCGTGGCAGGTACATCATGAAGGTGTTTTCAAGCTGCCCGTACATCTCCTTTTGCATGTCCTCGAAGTTGCGGTCG‑CGGGCCCGTTTTTCGAACTCACCGCCCAGCAGTTCTTCACAGTTTGGCCCCCAGATCACTTTGTCCATCCGTTTGCCGTAAATCAGTGAACGCGGGCGAg < 2:572760/229‑1 (MQ=255) ttGGAGGTAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTGGCCCCCAGATCACTTTGTCCATCCGTTTGCCGTCAATCAGTGAACGCGGGCGAg < 1:592412/238‑1 (MQ=255) tttgaattcccccggTTGGGCCGGGTGCCCCGCAGCTGGGATTGAGGCAGTTTTCGCACAGGGGGGGCAGGTACATCATGAAGGTTTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTGGCCCCCAGATCACTTTGTCCATCCGTTTGCCGTCAATCAGTGAACGCGGGCGAGCa < 2:873921/228‑1 (MQ=255) ggTAGAGAGCGCCGCTTGGGCCGGTCGCCACGTCGCTGGGGTTGAGTCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTTCCCGTACATCTCCTTGTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTGGCCCCCAGATCACTTTGTCCATCCGTTTGCCGTCAATCAGTGAACGCGGGCGAGCa < 2:687262/238‑1 (MQ=255) tgaatggcgcCGCTTGGGCCGGTCGCCACGCAGGTGGGGTGGAGGCAGTGGTCGCAGAGGCGGGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTGGCCCCCAGATCACTTTGTCCATCCGTTTGCCGTCAATCAGTGAACGCGGGCGAGCAGt < 2:80880/233‑1 (MQ=255) taaaatgggccggTTGGGCGGGTCGCCACGCAGCGGGGATGGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGTGGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTGGCCCCCAGATCACTTTGTCCATCCGTTTGCCGTCAATCAGTGAACGCGGGCGAGCAGt < 2:860237/231‑1 (MQ=255) cgccgcTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCCGTTCTTCCCCGTTTGGCCCCCAGATCACTTTGTCCCTCCGTTTGCCGTCAATCAAGGAAccgggggggcgcatggggaaa > 2:276303/1‑219 (MQ=255) cgccgcTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATAATGAAGGTGTTTTCAAACTGCCCGGAACTCTACTTTTGCCTGGCCTCGAAGTTGCGGTCC‑TGGGCCCGCTTTTCGAACTTACCGCCCAGCCGTTCTTCCCAAGTTGGGCCCCCGTTCCCCTTGTACCTCCGTTTCCCGGCAACCAGTGTACGCAGGGGacgcggtggaata > 2:120382/1‑227 (MQ=255) cggttGGGCAGGTGGCCCCGCAGGGGGGATTGAGGCAGGGTTCGCACAGGCGCGGCAGGTACATCATGAAGGGGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTGGCCCCCAGATCACTTTGTCCATCCGTTTGCCGTCAATCAGTGAACGCGGGCGAGCAGTAGGAATATGt < 2:756293/236‑1 (MQ=255) cgcTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCC‑CGGGCACGGTTTTCGAACTTACCGCCACGCAGGTTTTCCCCGTTTGGCCCCCCGATCACCTTTTCCATCCGTTTTCCGTCAAACAGGGAACCGGGGCGGGCAGTCGGaaaagtt > 2:698533/1‑234 (MQ=255) ggTCGCCCCGGAGCGGGGATTGGGGGAGTGTTCGCGCGGGCGCGGGAGGGACATCATGAAGGTGTTTTCAAACCGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTGGCCCCCAGATCACTTTGTCCATCCGTTTGCCGTCAATCAGTGAACGCGGGCGAGCAGTAGGAATATGTTTGCCTTCCg < 2:586435/239‑1 (MQ=255) ggTCGCCACGCAGCTGGGGTTGAGGCAGTGTTCGCCCAGGGGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTGGCCCCCAGATCACTTTGTCCATCCGTTTGCCGTCAATCAGTGAACGCGGGCGAGCAGTAGGAATATGTTTGCCTTCCg < 2:356018/239‑1 (MQ=255) cGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTGGCCCCCAGATCACTTTGTCCATCCGTTTGCCGTCAATCAGTGAACCCGGGCGAGCATTAGGAATATGTTTGCCTTCCg‑gg > 1:294113/1‑237 (MQ=255) cccgcgGCGGGGGTTGGGGCAGTTTTCGCACAGGCGGGGCAGGTACATCATGAAGGGGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTGGCCCCCAGATCACTTTGTCCATCCGTTTGCCGTCAATCAGTGAACGCGGGCGAGCAGTAGGAATATGTTTGCCTTCCG‑GTgcg < 2:950144/236‑1 (MQ=255) cACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTGGCCCCCAGATCACTTTGTCCATCCGTTTGCCGTCAATCAGTGAACGCGGGCGAGCAGTAGGAATATGTTTGCCTTCCG‑GTgcg < 1:697373/238‑1 (MQ=255) ccggtGGGATTGGGGGAGTGTTCGCACGGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTGGCCCCCAGATCACTTTGCCCATCCGTTTGCCGTCAATCAGTGAACGCGGGCGAGCAGTAGGAATATGTTTGCCTTCCG‑GTGCGCTATg < 2:419189/235‑1 (MQ=255) cGCACAGGCGCGGCAGGTACATCATGAAGGAGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCC‑CGGGCACGGTTTTCGAACTCACCGCCCAGCAGTTCTTCCCCGTTTGGCCCCCAGATCACTTTTTCCATCCCTTTTCCGTCAATCCGTTAACCCGGGCGAGCAGTAGGGATATGTTTTCTTTCCGTGTG‑GCTATGACAATTTTCGTAGGCGGAgggg > 2:629651/1‑237 (MQ=255) gCACAGGCGCGGCAGGTACCACATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTGGCCCCCAGATCACTTTGTCCATCCGTTTGCCGTCAATCAGTGAACGCGGGCGAGCAGTAGGAATATGTTTGCCTTCCG‑GTGCGCTATGCAAATGTTCGTAGTCGAAGGTGa < 1:208816/239‑1 (MQ=255) ccccaGGGGCGGCAGGGTCATCATGAAGGTGTTTTCAAACTGCCCGGTCATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTGGCCCCCAGATCACTTTGTCCATCCGTTTGCCGTCAATCAGTGAACGCGGGCGAGCAGTAGGAATATGTTTGCCTTCCG‑GTGCGCTATGCAAATGTTCGTAGTCGAAGGTGa < 2:633601/236‑1 (MQ=255) ggCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTGGCCCCCAGACACCTTTGTCCATCCGTTTTCCGTCCATCCGTGAACCCGGCGGCGCGACAGGAACATGTTTTCCCTTCG‑GGGGGCTCGGCAAAGGTTCTAAGTCTCAGGGGAAGGGt > 2:206099/1‑239 (MQ=255) cgcgGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAAATCACCGCCCCGCAGTTCTTCCCAGTTTGGCCCCCCGATAACTTTGTCCATCCGTTTGCCGTCAATCCGTGAACGCGGGCTGGCCGTGGGAATATGTTTCCCTTCCG‑GTGCGCTTTCCAAATGTTGCAATTCGAGGGGGAAAGGtac > 2:180185/1‑237 (MQ=255) gggCAGGTAAATCATGAAGGTGTTTTCAAACTGCCCGTACTTCGCCTTTTGCATGGCCTAGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTGGCCCCCAGATCACTTTGTCCATCCGTTTGCCGTCAATCAGTGAACGCGGGCGAGCAGTAGGAATATGTTTGCCTTCCG‑GTGCGCTATGCAAATGTTCGTAGTCGAAGGTGAAAGGTTCg < 1:576968/237‑1 (MQ=255) cgggtggTCCATGAGGAAGGTGTTTTCAAACTGCCCGTACATTCCCTTTGGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTGGCCCCCAGATCACTTTGTCCATCCGTTTGCCGTCAATCAGTGAACGCGGGCGAGCAGTAGGAATATGTTTGCCTTCCG‑GTGCGCTATGCAAATGTTCGTAGTCGAAGGTGAAAGGTTCg < 1:476612/233‑1 (MQ=255) cgGCAGGTACATCATGAAGGTTTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTGGCCCCCAGATCACTTTGTCCATCCGTTTGCCGTCAATCAGTGAACGCGGGCGAGCAGTAGGAATATGTTTGCCTTCCG‑GTGCGCTATGCAAATGTTCGTAGTCGAAGGTGAAAGGTTCg < 1:698533/238‑1 (MQ=255) cgGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTGGCCCCCAGATCACTTTGTCCATCCGTTTGCCGTCAATCAGTGAACGCGGGCGGGCAGTAGGAATATGTTTGCCTTCCG‑CTGCGCTATGCAAATGTTCGTAGTCGAAGGGGAACGGTTCgt > 1:813942/1‑239 (MQ=255) ggCAGGTACACTAGGAAGGTTTTTCCAAATGGCCCGTACATCTCCTTTGGCATGGCCCCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTGGCCCCCAGATCACTTTGTCCATCCGTTTGCCGTCAATCAGTGAACGCGGGCGAGCAGTAGGAATATGTTTGCCTTCCG‑GTGCGCTATGCAAATGTTCGTAGTCGAAGGTGAAAGGTTCgta < 2:620800/239‑1 (MQ=255) gCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTGGCCCCCAGATCACTTTGTCCATCCGTTTGCCGTCAATCAGTGAACGCGGGCGAGCAGTAGGAATATGGTTGACTTCCG‑GGTCGCTATGCAAATGTTCGTAGTCGAAGGGGAAAGGTTCggag > 1:620800/1‑239 (MQ=255) aGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTGGCCCCCAGATCACTTTGTCCATCCGTTTGCCGTCAATCAGTGAACGCGGGCGAGCAGTAGGAATATGTTTGCCTTCCG‑GTGCGCTATGCAAATGTTCGTAGTCGAAGGTGAAAGGTTCgtagt < 1:276303/238‑1 (MQ=255) tttcatcatGTAGGTTTTTGTAAACTTCCCGTACATCTCCTTTTGCATGGCCCCTAAGTGGCGGTGG‑CGGGCACGTTTTTCGAACTCCCCGCCCTGGAGTGCTTCCCAGTTTGGCGCCCAGATCACTTTGTCCATCCGTTTGCCGTCAATCAGTGAACGCGGGCGAGCAGTAGGAATATGTTTGCCTTCCG‑GTGCGCTATGCAAATGTTCGTAGTCGAAGGTGAAAGGTTCGTAGTAat < 2:317628/236‑1 (MQ=255) tACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTGGCCCCCAGATCCCTTTGTCCATCCGTTTGCCGTCAATCAGTGAACCCGGGCGGCCAGTAGGAATATGTTTGCCTTCCG‑GGGCGCCATGCAAAGGTTCGTAGCCGAAGGGGAAAGGTTCggatgaaat > 2:63984/1‑231 (MQ=255) aaGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTGGCCCCCAGATCACTTTGTCCATCCGTTTGCCGTCAATCAGTGAACGCGGGCGAGCAGTAGGAATTTGTTTGCCTTCCG‑GTTCGCTATGAAAATGTTCGTAGTCGAAGGTTAAAGGGTCGAGGCAATCATAAATCtc > 2:767297/1‑238 (MQ=255) tgtTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTGGCCCCCAGATCACTTTGTCCATCCGTTTGCCGTCAATCAGTGAACGCGGGCGAGCAGTAGGAATATGTTTGCCTTCCG‑GTgcg < 2:746056/182‑1 (MQ=255) tgtTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTGGCCCCCAGATCACTTTGTCCATCCGTTTGCCGTCAATCAGTGAACGCGGGCGAGCAGTAGGAATATGTTTGCCTTCCG‑GTgcg > 1:746056/1‑182 (MQ=255) | AATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCG‑CGGGCACGTTTTTCGAACTCACCGCCCAGCAGTTCTTCCCAGTTTGGCCCCCAGATCACTTTGTCCATCCGTTTGCCGTCAATCAGTGAACGCGGGCGAGCAGTAGGAATATGTTTGCCTTCCG‑GTGCGCTATGCAAATGTTCGTAGTCGAAGGTGAAAGGTTCGTAGTAATCATCAATCTG > NC_000913/1538104‑1538568 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |