| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,708,758 | G→C | 8.6% | E614Q (GAA→CAA) | rsxC → | SoxR iron‑sulfur cluster reduction factor component, putative membrane‑associated NADH oxidoreductase of electron transport complex |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,708,758 | 0 | G | C | 8.6% | 247.2 / 9.2 | 103 | E614Q (GAA→CAA) | rsxC | SoxR iron‑sulfur cluster reduction factor component, putative membrane‑associated NADH oxidoreductase of electron transport complex |
| Reads supporting (aligned to +/- strand): ref base G (63/27); new base C (2/7); total (67/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.18e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.68e-01 | |||||||||||
Only 100 of 106 total aligned reads displayed.
CAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCA > NC_000913/1708523‑1708994 | cAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCAATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCagaaga < 1:948534/237‑1 (MQ=255)cAGAGCGAAACAGGCAGAACGGCAGCAACCGAAGGGCGCAGCAACCGGTGCTGACCCACGAAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCAAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAAc < 2:382620/239‑1 (MQ=18) agCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCCACAGGCTAATGCGGACCAAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCCAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAg > 1:1099284/1‑238 (MQ=255) gCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAgg < 1:1246394/238‑1 (MQ=255) aaCAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCCCGCAAACCGGAACAGCAACAGGCTCATGCGGAGGCCGAAGACCAGATCgc > 2:13557/1‑237 (MQ=18) cagcaAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGAAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAgccg > 1:640536/1‑238 (MQ=255) agcaAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCGGGAACAGCAACAGGCTAATCCGCAGACAGACGAACAgccccctctgcgaaaagcagc > 2:856185/1‑218 (MQ=18) cTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACCGGCTAATGCGGAACCAGAACAACAGGTCGCTCAGCGCAAAGCGGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAGCTGGTACAGCAACAGGCTAATGCGGAACCAGAAAAACGAGTCGATCAGCGCCAACCAGCCGtggca > 2:9709/1‑235 (MQ=18) tAACGCCGAAGAAACCGTGGCTGATCCTGCAAAAACGGCCGATGAAGCAGCTAGCGCCGGGCCAAAAGCGCGCAAGCAGGAACACCAACAGCCTAATGAGGAACCAGAACCACAGGCCGATCCACGCAAAGCCGCCGTCGAAGCAGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑Ag < 2:411275/239‑1 (MQ=14) aaacagcggccaaaCCGTAGAGGACCCACGCAAAACTGCCGTCGAAGACGCTCACGCCCGCGACAAAGGACGCAAGCTGGAACAGCAACAGGCTAATGCGGAACAAGAAGACCAGGTCGATCCGAGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑Ag < 2:942367/227‑1 (MQ=11) cgcaccaagaaaCCATGGCTGAGCCACGCAAAACGGCCGTGAAAGCAGGTATTGCCCGCGACAAAGCGGGAAAGCAGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGCCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGc < 2:445210/228‑1 (MQ=11) acgcggccgaaaccccggataacccACGAAAAACTGCCGTAGAGGAAGCCAGCACCGGCGCAAAAGGGCGCAAGCGGGAACAGCAGCAGCCAAATACGGAACCAGAACAACAGGCCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑Ag < 2:179892/214‑1 (MQ=14) atcagcaACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAAGTCGATCCCCGCAAAGCCGCCGCAGACGCCGCTATTGCCCGAGCCAAAGCCCGCAAGCTGGACCAGCAACAGGCTAATGAGGAACAATAAGAACAGTTCGAGCCGAGCAAAgccccctcgacgacgcaca > 2:737188/3‑226 (MQ=17) gcaACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGGGCAAAGCCGCCGTCGA‑AGcgcctcttg > 2:114907/1‑230 (MQ=255) gcaACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCCCAGAGCCGCCGTCGA‑CGCCGCTATTg > 1:948315/1‑238 (MQ=255) aaCCGTTGTTAATCCACTTAAAACTGCCGTGGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGc < 2:1230711/237‑1 (MQ=255) ttGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTACTGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAACGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCGGCTATTCCCCGTGc > 2:514010/1‑238 (MQ=255) tGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAg < 1:1009401/239‑1 (MQ=255) aTCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAGCCGGCACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCTCGCAAAGCCGCCGTAGA‑AGCGGCTATTGCACGCGCCAAAGc > 2:434187/1‑238 (MQ=17) ccACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCAGCCGTCGA‑AGCCGCTATTGCCCGGGCCAAAGCAc > 1:175598/1‑238 (MQ=255) cagcGTAAAACTGCCGTAGAGGCAGCGATCGACGCCGCAAAAGCGCGCAAGCAGGAACAGCAACAGGCAAATGCGGAACCAGAACACCAGGCTGATCCGCGAAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACg < 2:317099/236‑1 (MQ=14) cGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGCGCCAAAGCGCGCAAGCCGGCACAGCAACAGGCTAATGCGGAGCCCGAAGAACAGGTCGATCCGCGCAAAGCGGCCGTCGA‑CGCCGCTATTGCCCGTGcgacggccacgaa > 2:275613/1‑227 (MQ=14) cGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGACCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCGGCTATTGCCCTTGCCAAAGCACGCaa > 1:390349/1‑239 (MQ=255) cGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCa > 1:486998/1‑238 (MQ=255) cGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTAGTCCCCGGGCCAAAGCCCGCaa > 1:753870/1‑239 (MQ=255) cGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCCCGAAAGCTGGCACAGCAACAGGCTAAAGCGGAGCCAGAAGAACAGGTCGACCCGGCCAAAGCCCCCG‑CGACAGCCGCCATTGcccagacccagcactcaaa > 2:81694/1‑223 (MQ=14) cGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGCGCCAAAGCACGCaa > 1:753016/1‑239 (MQ=255) aaCTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTCCCAAAGCACGCAAACTgg > 1:1136878/1‑239 (MQ=255) ctgctgcaggacaggcaaTCGCACGAGCAAAAGCGCGCAAACCGGAACAGCACCGGGCCAATACGGGGCCAGGAGAGCAGGTTTACCCGCTCAAAGCTGCCGTCGAAGCTGCTATTGCGCGAGCAAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGAGCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGaa < 2:940155/222‑1 (MQ=14) cTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGaa < 1:359257/239‑1 (MQ=255) ccGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGCGCCAAAGCCCGCAAGCCGGCACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGTCGGTCCGCGCAAAGCCGCCGTCGA‑CGCCGCCCTTGCCCCAGCCAAGGCCCGCAACCCGGcaca > 2:107715/1‑238 (MQ=11) ccGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCGATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCACAGCCCCCGACGA‑GCCCGCTACCACCAGTGCCAAAGCGTGAAAGCGGGACCa > 2:1127665/1‑238 (MQ=14) cGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGAACGCAAGCCGGAACAGc > 1:919449/1‑239 (MQ=255) cGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAAAACAGGTCGATACGCGCAAAGCCGACGTCGA‑AGCCGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGc > 2:293912/1‑239 (MQ=255) tgaaagaagTTATCGCCAGCGCAAGACCGCCCAAGCGTGAACAGCACCAGGGTAATGCGGAACCAGAACAACAGATCAATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCCGGAACAGCaa < 2:919449/236‑1 (MQ=14) tGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCaa < 1:686366/238‑1 (MQ=255) aTCGCCCGCGCCAAAGCGCCCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGc < 1:72640/239‑1 (MQ=255) accgcgacaaaaGCGGGCAAGCAGGAACAGCAAAAGGATAATGGAGACCCAGAACACCAGGCTGATCCGCGAAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATgtgga < 2:1343126/230‑5 (MQ=11) gcgcCAAAACTCGGAAGCTGGAACAGCAACAGCCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCa < 1:287553/239‑1 (MQ=255) cgcCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAAAAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCAGTCGC‑AGCCGCTATTGCCCGAGCCAAAGCCCGAAAGCCGGACCAGCAACAAGCCAATGCCggtccc > 2:104674/1‑233 (MQ=14) cgcCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGCGCCAAAGCACGCAAGCTGGCACAGCAACAGGCTAATGCCGAGCCAg > 1:504166/1‑239 (MQ=255) caacaatcggccAAGCGGGCACAGCAACAGGAGAGTGCGGAGGCAGAACACCCGGATAACACGGGAAAGACTGCAGAGGAGGCAGCTATTGCCCGTGCCAAACGACGCAAGCTGGAACAGCAACAGGCTAATGACGAGCCAGAACACCAGGCCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGcc < 2:424220/225‑1 (MQ=9) gcAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGACCCGCGCAAAGACGCCGCCGA‑AGCCGCTATTGACCAGGGCAAAGCACGCAAACGGGAACAGCAACAGGCTAATGCGGAACCAGAAAAACAGGTc > 2:1131926/1‑239 (MQ=11) cAACAGGCTAATGCGGACCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGCAGCCAGAACAACAGGTCGATCCGCGCAAAGCAGCCGTCGA‑CGCCGCCATTGCCCGCGCCAAAGCACGCAAGCTGGCACACAAACAGTCCAAAGCGGAGACATAACAACAgaccaagcagctcaaaa > 2:811437/1‑222 (MQ=11) cAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGCACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGC‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCCGGCACAGCAACAGGCTAATTCCGAGCCAGAAAAACAGGTCAATCCGCGCaaaa > 1:521052/1‑237 (MQ=255) aCAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGCCAAAGCCCGCAAGCTCGCACAGCAACACGCTAATGCCGAACCAGAACAACAGGTCAAACCGCGCAAAGCCGCCGTCGC‑ATCTGCTATTGCCCGCGCCAACGCGCGCAAGGCGCAACAGCAAAACGCTACCGCCGCACACGAACAAGAGGTCGAACCGCCCAACgcg > 2:659619/1‑237 (MQ=11) aagggggAACCAGAACAGCAGTTCGATCCGCCTAAAGCGGCCGTGGAAGCCGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGCCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGa < 2:486998/234‑1 (MQ=14) aagaggAAACAGAAAAAAAGGACGACCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTTGATCCGCGCAAAGCCGCCGTCGA‑AGCGGCTATTGCCCGTGCCAAAGCCCGACCGCTGGCACCGACCCAGGCTCCTGCAGAACCAGCACAAAAGGCCGATCCGCGCAAAGCCGCAGTCGa > 1:738655/5‑238 (MQ=14) aTGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGACGATCCGCGCAAAGCTGCGGTAGA‑CGCCGCGATGGCCCGGGCCCAAGCCCGAAAGCCGGCACAGCAGACGGATGAAGCCGTGGCAGAAGAGCAGGTCGGGCCGCCCAGAgccgaataaaa > 2:81355/1‑231 (MQ=14) ttcGGAACCAGACCAACAGGTGGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAg < 1:1100851/237‑1 (MQ=255) tGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACTGGAACAGCAACAGGCTAATGCGGAGACCGAAGAACAGGTCGAACCGCGCAAAGCCGCCGTCGA‑CCCGGCTATTACACGCGCCAAAGCCCGCCAGCGAGAACAGCAACAGGCTAATGCCGAGCCCGAAGAACAGGTCAATCCACGCAAcgccgctcacgca > 2:859405/1‑231 (MQ=11) aaCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGCACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGC‑AGCCGCTATTGCCCGAGCCAAAGCACGCAAACTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCt > 1:564441/1‑239 (MQ=255) aaCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCt > 1:1303580/1‑239 (MQ=255) aaCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTATTGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCg > 1:1240600/1‑237 (MQ=255) ccAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCCACCCGCGCAAAGCCGCCGTCGACGCCGCTAt > 1:722026/1‑239 (MQ=255) gAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCCGTCGA‑AGCCGCTATTGCCCGCGCCAAAGCACGCAAACCGGAACAGCAACAGGCCAATGCCGTACCAGAACAACAGGCTGATCCGCGAAAACACGCAGTAGAAACCGGTAtgg > 2:403392/1‑236 (MQ=11) acaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑CGCCGCTATTGCCCGAGCCAAAGCCCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGGTCCGCGCAAAGCCGCCGTCGCAGCCGCCACTGCCCgc > 1:421707/1‑237 (MQ=255) acaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGa > 1:771686/1‑238 (MQ=255) acaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGa > 1:1260993/1‑238 (MQ=255) gTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTTGCAGCCGATATTGCCCGAGCCaa > 1:773580/1‑239 (MQ=255) cGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCGGCTATTGCCCGCGCCAAAGCACGCAACCCGGAACAGCAACAGGCTAATGACGAGCCAGAAGACCAGGTCGGACCGCGCAAAGCCGCCGTCGCCGCGGCCATTGCCCGAGccgcg > 2:267888/1‑235 (MQ=14) acgacaaagaccgccgTCGAAGACACTATAACACGCGCCAAAGAGCGAAACCTGGAACAACATAAGGCAAATACGGAACCAGAACAACAGGACGATCCGCGAAAAGCCGCCGTCGA‑AGCAGCTATCGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAgcgcg < 2:86255/229‑1 (MQ=11) cgcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACACCAGGTCGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCCCGAGCCAAAGCCCGCaa > 2:785643/1‑239 (MQ=255) ccaaaatctgccgtacgaGCCTCTATCGCCAGTGCCTAGACGCCCAAGCTGGAACAGCAACAGAAAAATGCCGAACCAGAACACCAGGGTGAGCGGCGCAAAGCCGCGTTCGA‑AGCCGCTATTGCCCGCGCCAAAGCACGCAAACTGGAACAGCAACAGGCTAATGCCGACCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCa < 2:1237051/221‑1 (MQ=11) gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGCGCCCAAGCGCGCaa > 1:488784/1‑238 (MQ=255) aactgccgTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACggg > 1:891524/5‑239 (MQ=255) gccgccGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑CGCGGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCGTATCCCGTACCCGAACAACAGGTCCGTCCCCGAGACGCGGCCGCCGACTCCGCCATTCCCCTCGCCCAAgcccaagaagcggc > 2:302822/1‑227 (MQ=14) aTTGCCCGGGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTATTGCGGAACCAGAAGAACAGGTCGATCCGCGCAAACCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCAATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGc < 1:69731/239‑1 (MQ=255) ttGCCCGTGCCAAAGCGCGAAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCg < 1:1269838/239‑1 (MQ=255) gccggggCCAAACCGCGCAATGTGGAACAGCAGCAGGTAAATGCGGAACCAGAAGCACTGGATGATCCGCGCAAAGCTGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGa < 2:1171526/233‑1 (MQ=14) gCCCGAGCCAAGGCGCGCAAACTGGAACAGCAACAGTCTAATGCGGAACCAGAAGACCAGGGCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGa < 1:9709/239‑1 (MQ=14) tGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCTGAACAACAGGTCGCTCCACGCAAAGCCGCCGCGCAAGCCGCTATTTCCCGGGCCACAGCTCGCACACCAGCACAGCATCCAGCTCATGccgtacccg > 2:1126621/1‑231 (MQ=11) tGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAACCGGAACAGCAACAGGCTAATGCCGACCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCag > 2:1019005/1‑239 (MQ=255) agCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGA‑AGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCGGCTATTGCCCGAGCCAAAGCCCACAAGCCGGACCAGCAACCGGTCGATGCGGAGcccg > 2:689268/2‑237 (MQ=11) gCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCCCGAAAGCCGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGACGAAGCCGCTCTGGCCCGCGCCAACGCCAGCAAACGGCAGCCGCAACCGGccgatgtcgcgccac > 2:1019286/1‑224 (MQ=14) gCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGCGCCAAAGCAAGCAAGCTGGCACAGCAACAGGCTAATGCGGAGCAAGAAAAACAGGTCGATCCGCGCAAATCCGCCGTTGAAGACGCCATTGCCCGAGCCATCGCCCGTAAACTGGAGCAGCAACACGCTACTGCCGCGcccgc > 2:102542/1‑236 (MQ=11) aaaGGGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTCGATCCCCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGAGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCagaaga < 1:114907/239‑1 (MQ=255) aaaGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGGGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCagaaga < 1:1127665/239‑1 (MQ=255) aaaGCGCGAAAGCTGGCACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGACGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCagaaga < 1:1096628/239‑1 (MQ=255) agcaggcacaacacgacgcaaaTGCGGAACCAGCAAAAGAGGCAGATCCGCGAAAAACCGCCGTCGA‑AGCCGCTAGTGCCCGGGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGAt < 2:1225708/219‑1 (MQ=14) ggAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGc < 2:1188134/75‑1 (MQ=34) ggAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGc > 1:1188134/1‑75 (MQ=34) cAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGGGCCAGAAGAACAGGGCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAATCGGGAACGGCAACAGGCTAATGCGGAGCCATGAGAACAGGTTGATCCTCGCAAAGc > 2:561952/1‑239 (MQ=11) cAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCaaa > 1:443351/1‑237 (MQ=255) cAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAACCGCAGTCGAAGCCGCTATTGCCCGAGCCAAAGCGGGCAAACGGGAGCAGCAACCGGCCAATGCGGAGCCAGACGACCAGGTTGATCCGCGCaaa > 1:666755/1‑237 (MQ=255) aaCAGGATAAGAAGGAAGCAGAACCACAGGTCAACCGGCGAAAAGCCGCCGTCGA‑AGCAGCTAGTGCCGGGGCAAAAGCAGGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACACCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCt < 2:387238/239‑1 (MQ=14) aGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAAAACAGGTCGAACCGCGCAAAGCCGCCGTCACCGCCGCTATTGCCCGCGCCAAAGCCCGCAAGCTGGAACAGCAACCGGCTACTGCGGAGGCACAAGAACAGGTAGCTGCGCGCTAtgctgc > 2:219254/1‑238 (MQ=11) ggCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCCATTGCCCGAGCCAAAGCGCGCAAACGCGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGATGATCCGCGCCAAGCGGCCg > 1:359663/1‑239 (MQ=255) ctaagccGGAATCAGAAGAACAGGCCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGCGCCAAAGCACGCAAGCTGGACCAGCAACAGGCTAATGCGGAACCAGAACAACAGGCCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCg < 2:390349/231‑1 (MQ=14) aaagCGGAACCAGAAGAACAGGGCGATCCGCGTAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGGACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGa < 1:154430/236‑1 (MQ=255) aTGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGaa > 1:1273107/1‑239 (MQ=255) aTGAGGACCCAGAAAACCAGGCTGATCCGCGAAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGGGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGaa < 1:863998/239‑1 (MQ=17) aaCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAAc > 1:11539/1‑174 (MQ=255) aaCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAAc < 2:11539/174‑1 (MQ=255) aaCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCt > 1:1087822/1‑239 (MQ=255) aaCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTAATCCGCGCAAAGCTGCCGTCGAAGCGGCt > 1:226820/1‑239 (MQ=255) aaCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCACGAAGAACAGGTTGATCCGCGCAAAGCTGCCACCGACTCGGCt > 1:1164041/1‑239 (MQ=255) aaCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACCGGAACAGCAACAGGCTACTGCGGATCCAGCAGCCCAGGTTGATCCGCGCCAACCTCACGACGAACCgga > 2:1002726/1‑237 (MQ=14) aagaaCAGGTCGATCCGCGCAAAGCCGCCGTAGA‑AGCCGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCAGCTATTGCACGAGCCAAAGCGAGAAAACGGGAACAGCAACAGGCGAACGCGGCTCACGCAAAACAGGCTGGTCCGCGCACAACTGccatggctcacgcgattga > 2:353642/1‑221 (MQ=14) agaaCAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGGTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCa < 1:514010/238‑1 (MQ=255) | CAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCA > NC_000913/1708523‑1708994 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |