| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,367,380 | G→A | 15.7% | Q104Q (CAG→CAA) | arnC → | undecaprenyl phosphate‑L‑Ara4FN transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,367,380 | 0 | G | A | 15.7% | 133.1 / 3.6 | 61 | Q104Q (CAG→CAA) | arnC | undecaprenyl phosphate‑L‑Ara4FN transferase |
| Reads supporting (aligned to +/- strand): ref base G (22/29); new base A (2/8); total (24/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.90e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
ATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATATGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGG‑ATTCAGTCACGTTACTGGC‑GACTTAATTATTACCCTTGAT‑GCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCT‑GGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTT > NC_000913/2367147‑2367617 | aTCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATATGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGCTTATGGCGGG‑GTTTTGTCACGTTCCTGGC‑GCCTTTATTTTTACCCTTTAT‑TCCGCTTTCCCGaagc > 1:1347797/1‑236 (MQ=255) accaccacAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGAGGACGGCAGTAGCGATAATTCCGCGCATATGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGG‑ATTCAGTCACGTTACTGGC‑GACTTAATTATTACCCTTGAT‑GCCGATCTCCAGAATCCGCCagaaga < 2:127985/239‑1 (MQ=255) tgtgAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATATGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGG‑GTTCAGGCACCGTACTTGG‑GGCCTTATTTTTTCACTTTATGGCGGATC‑CCCGAAACCCCCAGAAGACAACCCCCGcc > 1:348528/1‑238 (MQ=255) tgtgAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATATGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGG‑ATTCCGTCACGTTAATTGC‑GACTTAATTATTACCCCTGAT‑GCCGCTCTCCAGAAACCTCCCGAAAAAATcccccc > 1:594288/1‑235 (MQ=255) tgtgAAGCGGAGGGAAAGGGGTATGGTATCCTCCGGATTGAGGACGGCAGTAGCGATAATCCCGCGCATATGCTGGTCGAGGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGG‑ATTCAGTCACGTTACTGGC‑GACTTAATTATTGCCCTTGAT‑GCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCt < 2:1081301/239‑1 (MQ=255) tgAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATATGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGG‑AGTCAGTCACGTTACTTGC‑GACTTAATTATTATCCTTGAT‑GCCGCTATCCCGAAACAGCCACAAGAAATCCCCCCCCt‑gg > 1:356145/1‑239 (MQ=255) gTTGGGAAAAGAGGAGGGGATCCTGCTGATTGAGGACGGCAGTAGCGATAATTCCGCGTATATGCTGGTCGAAGCCTCACAATGGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGG‑ATTCAGTCACGTTACTGGC‑GACTTAATTATTACCCTTGAT‑GCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCT‑GGTGGCaa < 2:566234/239‑1 (MQ=255) aaGAGTATGAGATCCTGTTGATTGATGACGGCAGTAGCGATAATTCCGCGCATATGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGG‑ATTCAGTCACGTTACTGGC‑GACTTAATTATTACCCTTGAT‑GCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCT‑GGTGGCAAAAGCCGAt < 2:1330285/239‑1 (MQ=255) aaGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATATGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGG‑ATTCAGTCACGTTACTGGC‑GACTTAATTATTACCCTTGAT‑GCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCT‑GGTGGCAAAAGCCGAt < 1:329354/239‑1 (MQ=255) agagGATGAGAGCACGCTGAGGGATGACGGAAGTACAGATAATTCCGCGCATATGCGGGTCGAAGCCTCACAAGCGGAGACCAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGG‑ATTCAGTCACGTTACTGGC‑GACTTAATTATTACCCTTGAT‑GCCGATCTCAAGAATCCGCCAGAAGAAATCCCCCGCCT‑GGTGGCAAAAGCCGATg < 2:466140/239‑1 (MQ=255) agTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATATGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGG‑ATTCAGTCACGTTACTGGC‑GACTTAATTATTACCCTTGAT‑GCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCT‑GGTGGCAAAAGCCGATg < 1:310841/237‑1 (MQ=255) aTCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATATGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGG‑ATTTTGTCACGTTTCTGGG‑GACTTAATTATTATCCTTCTT‑GTCCCTCTCCAGAAACCACCACAAGAAATACCCCCCCC‑CGTGGCcaaaaacgcagaggggtacgg > 2:30796/1‑222 (MQ=255) tCCTGCTGATTGATGACGGCAGTGGCGATAATTCCGCGCATATGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGG‑ATTCAGTCACGTTACTGGC‑GACTTAATTATTACCCTTGAT‑GCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCT‑GGTGGCAAAAGCCGATGAAGGTTacgac < 1:800228/239‑1 (MQ=255) tCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATATGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGG‑ATTCAGTCACGTTACTGGC‑GACTTAATTATTACCCTTGAT‑GCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCT‑GGTGGCAAAAGCCGATGAAGGTTacgac < 1:1109931/239‑1 (MQ=255) tCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATATGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGG‑ATTCAGTCACGTTACTGGC‑GACTTAATTATTACCCTTGAT‑GCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCT‑GGTGGCAAAAGCCGATGAAGGTTacgac < 1:968780/239‑1 (MQ=255) tCCTGCGGATTGAGGACGGCAGTAGCGATATTTCCGCGCATATGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGG‑ATTCAGTCACGTTACTGGC‑GACTTAATTATTACCCTTGAT‑GCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCT‑GGTGGCAAAAGCCGATGAAGGTTacgac < 2:331518/239‑1 (MQ=255) ccTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATATGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGG‑AGTTATTTAAGTTATTTGCGGCCTTAATTATTACCTTTTTT‑CCCG‑TCTCCCACAACCCCCACAAGAAAAACCCCCCCTCGGGGGCAAAAccccagaagggttcagac > 2:722041/1‑224 (MQ=255) attgatGACGGCAGTAGCGATAATTCCGCGCATATGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGG‑GTTCAGTCACGTTACTCGG‑GACCTAATTATTTCACTTTAT‑GCCGATCTCCAGAATCCGCCAAAAGAAAACCCCCGCCC‑GGTGGCAAAAACCGGTGAAGGGTACGACGTGGGAgg > 1:1356591/1‑239 (MQ=255) attgatGACGGCAGTAGCGATAATTCCGCGCATATGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGG‑ATTTAGTCACGTTAATGGC‑GACTTTATTATTATCCTTTAT‑GCCGGTCTCCAAAAACCGCCCGAAGAAAACCCCCCCCC‑GGGGGCCAAAACCCAAGAAGGTTAAGACGGGGTAgg > 1:1039333/1‑239 (MQ=255) ttgagGACGGCAGTAGCGATAATTCCGCGCAAATGCTGGTCAAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGG‑ATTCAGTCACGTTACTGGC‑GACTTAATTATTACCCTTGAT‑GCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCT‑GGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAgg < 1:575384/238‑1 (MQ=255) tgaCGGCAGTAGCGATAATTCCGCGCATATGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGG‑ATTCAGTCACGTTACTGGC‑GACTTAATTATTACCCTTGAT‑GCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCT‑GGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTg < 1:825696/239‑1 (MQ=255) aTAATTCCGCGCATATGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGG‑ATTCAGTCACGTTACTTGC‑GACTTAATTATTTCCCTTTAT‑GCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCCCCC‑GGTGGCAAAAACCGGTGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCg > 1:492993/1‑238 (MQ=255) aacggagaaaaCAGCCATATTGTGCTTATTTTGCTTAACCGCATTTCGGGTCAAAATTCAGCAATTATGGCGGG‑ATTCAGTCACGTTACTGGG‑GATTTATTTATTCCCTTGGAT‑GCGGATCCCAAGAATCCGCCAGAAGAAACCCCCCGCCT‑GGTGGCAAAAGCCGATGAAGGTGACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGaa < 2:646443/230‑1 (MQ=255) aaCAGCCATATTGTGTCTTTTTTGCTTAACCGCAATTACGGGCAACATTCAGCGTTTATGGCGGG‑ATTCAGTCACGTTACGGGC‑AACTTAATTATTACCCTTGAT‑GCCGATCTCCAAAATCCGCCAGAAGAAACCCCCCGCCT‑GGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTaa < 1:291324/239‑1 (MQ=255) aaCAGACATTTTGTGTATATTTTGTTTACCCCCAATTACGGGCAACATTCAGCGATTATGGGGGG‑ATTCAGACGCGTTACTGGC‑GATTTATTTATTCCCCTTGAG‑CCAGATCTCAAAAATCCGCCAGAAGAAACCCCCCGCCT‑GGGGGCAAAAGCCGATGAAGGTTCCGACGTGGAAGGGACTGTACGCCAGACCCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTaa < 2:356145/239‑1 (MQ=255) gCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGG‑GTTTAGTCACCGTTCTGGC‑GGCTTTATTATTTTCCTTTTT‑GTCGCGCTTCAGAATCCGCCCGAAGAAATCCCCCCCCC‑TGGGGCCAAAACCGATGAACGGTTCGACGTGGGAGGGGCTGTACACCCGAACCCCCCGGCCAGCTCGGTTCGTTAAACCGCTTCGGACATGACTAAACCGCTTCTTCAGCGcacccccc > 2:541093/1‑235 (MQ=255) ttAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGG‑GTTCAGTCCCGTTACTTGC‑GACTTAATTATTACCCCTTTT‑GCCGGTCTCCCGAATCCCCCCGAAGAAATCCCCCCCCT‑CGTGGCCACAACCGCTGAAGGGTACGACATGGGAGGGACTGTACGCCAGAACCGCCCGGGCAGCCGGTTTCGTAAAACAGCTTCGAAGGTGGTTAACCGGCTTCTTTAGCGCACCACTGGc > 2:424918/1‑239 (MQ=255) ttAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGA‑ATTCAGTCACTTTACTGGC‑GATTTAATTATTACCCTTGAT‑GCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCT‑GGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGc < 1:506914/239‑1 (MQ=255) ttACGGGCAACATTCAGCGATTATGGCGGG‑ATTCAGTCGCGTTACTGGC‑GACTTAATTATTACCCTGGAT‑GCCGATCCCCAAAATCCGCCAGAAGAAACCCCCCGCCT‑GGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATgg < 1:11763/239‑1 (MQ=255) ccGGGCAACATTCAGCGATTTTGGCGGG‑ATTCAGTCACGTTCCTGGC‑GACTTAATTATTCCCCTTGAT‑CCCGATCCCCAAAACCCGCCAGAAAAAACCCCCCGCCT‑GGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGt < 2:1039333/238‑1 (MQ=255) aCGGGCAACATTCAGCGATTAGGGCGGG‑ATTCAGTCACGTTACTGGC‑GACTTAATTATTCCCCTGGAT‑GCCGATCCCCAGAACCCGCCAGAAGAAACCCCCCGCCT‑GGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGt < 1:873147/239‑1 (MQ=255) gaaaCATCCAGCGTTTATGGCGGG‑TTTCAGTCACGTTACTGGC‑GCCTAAATATTTCCCCTGGTT‑GCGGTCCTCAAGAATCCGCCAGAAGAAATCCCCCGCCT‑GGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGAt < 2:492993/236‑1 (MQ=255) gCAACATTCAGCGATTAGGGCGGG‑ATTCAGTCACGTTACTGGC‑GACTTAATTATTCCCCTTGAT‑GCCGATCTCCAGAATCCGCCAGAAGAAACCCCCCGCCT‑GGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGAt < 1:800146/238‑1 (MQ=255) caaaCATTCAGCATTTAGGGGGGG‑TTTCAGTCACTTTCCTGGC‑AACTTATTTATTCCCCTTGTG‑GCCGACCCCCAGAACCCGCCAGAAAAAACCCCCCGCCT‑GGTGCCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCAAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGAt < 2:286467/236‑1 (MQ=255) cacaactgggcgatATGGGGGGAATACAGTCAGTTAACGGGC‑GATTAAATTATTCCCCTGGAG‑GCCGATCTCAAGAATCCGCCAGAAGAAACCCCCCGCCT‑GGTGGCAAAAGCCGATGAAGGTTACGACGTGGTGGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTa < 2:232824/226‑1 (MQ=255) aaCATTCGGCGTTTATGGCGGG‑ATTCATTCACTTTCCTGGC‑GATTTAATTTTTCCCCTGGAT‑GCCGTTCTCCAGAACCCGCCAGAAGAAACCCCCCGCCT‑GGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTa < 2:936135/238‑1 (MQ=255) aaCATTCAGCGATTAGGGCGGG‑ATTCAGTCCCGTTCCTGGC‑GACTTAATTATTCCCTTTGAT‑GCCGATCCCCAGAACCCGCCAGAAGAAATCCCCCGCCT‑GGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTa < 1:30796/238‑1 (MQ=255) ttATGGCGGG‑GTTTCGTCCCGTTACTTGC‑GACTTTATTTTTAACCCTGAT‑GGCGATCTCCCGAAACCGCCAGAAGAAAACCCCCCCCC‑GGTGGCAAAAACCGATGAAAGTTTCGACGTGGGAGGGACCGGAAGCCCGAAACGCCAGGACAGCTGGTTTCGTAAAACCGCCTTGGAGCAGATTAACCGGCTTCTTCAGCGCCCCACTGGCAAAGCGCGGGGGGGTTAAGGGTGGTtgctg > 2:703433/1‑239 (MQ=255) ggTTACTGGC‑GACTTAATTATTCCCCTTGAT‑GCCGATCTCCAGAACCCGCCAGAAGAAATCCCCCGCCT‑GGTGGCAAAAGCGGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCata < 1:686522/238‑1 (MQ=255) cGTTACTGGC‑GACTTAATTATTACCCTTGAT‑GCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCT‑GGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCata > 2:492605/1‑239 (MQ=255) cGTTACTGGC‑GACTTAATTATTACCCTTGAT‑GCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCT‑GGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCata > 2:960547/1‑239 (MQ=255) cGTTACGGGC‑GATTTAATTATTCCCCTGGAG‑GCCGATCTCAAGAACCCGCCAGAAGAAACCCCCCGCCT‑GGTGGCAAAAGCCGATGAAGGTTACGAGGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCata < 1:722041/239‑1 (MQ=255) gccTTAATTATTCCCCTGGAT‑CCAGATCTCCGAAACCCGCCAGAAAAAATCCCCCGCCT‑GGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGACCCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTcgatg < 2:985241/236‑1 (MQ=255) gACTTAATTATTCCCCTGGAT‑GCCGATCTCCAAAACCCGCCAGAAGAAACCCCCCGCCT‑GGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTcgatg < 1:424918/238‑1 (MQ=255) aCTTAATTATTACCCTTGAT‑GCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCT‑GGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTcgatgcg > 1:989446/1‑239 (MQ=255) ttAATTATTACCCTTGAT‑GCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCT‑GGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCCTATTGTcgatgcgat > 1:1144979/1‑239 (MQ=255) ttatcaCCCGTGAT‑GCCGATCTCAAGAACCCGCCAAAAGAAACCCACCGCCT‑GGGGGCAAAAGCCGAGGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTg < 2:142067/239‑1 (MQ=255) tccccTGGAT‑GCCAGTCTCCGGACACCACCAGAAGAAACCCCCCCCCG‑GGTGGCAAAACCCGAGGAAGTTTACGCGGTGGTAGGGACTGTGCGCCGGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACt < 2:348528/237‑1 (MQ=255) aCCCTTGAT‑GCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCT‑GGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACt > 1:1202812/1‑238 (MQ=255) ttgtccccGTTCCCCAAAATCCGCCAGAAGAACCCCCCCGCCG‑GGGGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCAt < 2:1356591/233‑1 (MQ=255) tGAT‑GCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCT‑GGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATg > 2:1185597/1‑239 (MQ=255) tGAT‑GCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCT‑GGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATg > 1:1158853/1‑239 (MQ=255) gAT‑GCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCT‑GGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGa > 2:1123282/1‑239 (MQ=255) gAT‑GCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCT‑GGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGa > 1:455141/1‑239 (MQ=255) gATCTCGAGAACCCGCCAGAAGAAATCCCCCGCCT‑GGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACgcag < 1:426569/239‑1 (MQ=255) gATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCT‑GGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGCTGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACgca > 2:669887/1‑238 (MQ=255) gATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCT‑GGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACgca > 1:808356/1‑238 (MQ=255) gATCTCCAAAATCCGCCAAAAGAAACCCCCCGCCT‑GGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACgcag < 1:1088123/239‑1 (MQ=255) aaTCCCCAGAATCCGCAAAAAGAAACCCCCCGCCT‑GGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACgcag < 1:729773/238‑1 (MQ=255) ccAGAACCCGCCAGAAACAACCCCCCGCGT‑GGGGGAAAAAGCGGAGGAAGGTTACGACGTGTTAGGAGCTGTACGCAAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCt < 2:161812/239‑1 (MQ=255) aGAATCCGCCAGAAGAAATCCCCCGCCT‑GGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCttt > 1:974585/1‑239 (MQ=255) | ATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATATGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGG‑ATTCAGTCACGTTACTGGC‑GACTTAATTATTACCCTTGAT‑GCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCT‑GGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTT > NC_000913/2367147‑2367617 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |