| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2945952 = | 70 (1.230) | 3 (0.070) +CTTGCGAATTCAATATATTGTATGGAAATTCAG |
3/218 | 6.3 | 5.3% | noncoding (59/97 nt) | RIP206 (repetitive extragenic palindromic) element, contains 2 REP sequences and 1 IHF site | RIP206 (repetitive extragenic palindromic) element, contains 2 REP sequences and 1 IHF site |
| ? | NC_000913 | 3676120 = | NA (NA) | noncoding (1/161 nt) | RIP264 (repetitive extragenic palindromic) element, contains 3 REP sequences and 1 IHF site | RIP264 (repetitive extragenic palindromic) element, contains 3 REP sequences and 1 IHF site | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATGCATCACTAATTACCACAGACATAGCACCTCAGAATTAAAAAGGGCGAGGTTATCCCTCACCCTAAACGCATAAATGC‑CTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCAATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAATATCACATCAGCCGCTAAAGA > NC_000913/2945816‑2946092 | aTGCATCACTGATTACCACAGACATGGCACCTCAGAATTAAAAAGGGCGAGGTTATCCCGCACCCTAAACGCATAAATGC‑CTGATGCGCTACGCTTATCAGGCCTAAATAACTCCTGACATATTTCGGCTTTGCACGAATTGt > 1:156029/1‑143 (MQ=38) tGCATCACTAATTACCACATACATATCACCTCAGAATTAAAAAGGGCGAGGTTATCCCTCACCCTAAACGCATAAATGC‑CTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTa < 2:749228/143‑1 (MQ=255) tGCATCACTAATTACCACAGACGTAGCACCTCAGAATTAAAAAGGGCGAGGTTATCCCTCACCCTAAACGCATAAATGC‑CTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTa < 1:283207/143‑1 (MQ=255) gCATCACTAATTACCACAGACATAGCACCTCAGAATTAAAAAGGGCGAGGTTATCCCTCTAAATACCCCAAACTAGGCTCTG‑TGCGCTACGCTTATCAGTCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAg < 2:458415/143‑1 (MQ=255) gCATCACTAATTACCACAGACATAGCACCTCAGAATTAAAAAGGGCGAGGTTATCCCTCACCCTAAACGCATAAATGC‑CTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAg < 2:923997/143‑1 (MQ=255) aTCACTAATTACCACAGACATAGCACCTCAGAATTAAAAAGGGCGAGGTTATCCCTCACCCTAAACGCATAAATGC‑CTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTTCATGATTTGTAgac > 2:707198/1‑141 (MQ=255) tCACTAATTACCACAGACATAGCACCTCAGAATTAAAAAGGGCGAGGTTATCCCTCACCCTAAACGCATAAATGC‑CTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGcc < 1:172907/143‑1 (MQ=255) cACTAATTACCACAGACATAGCACCTCAGAATTAAACAGGGCGAGGTTATCCCTCACCCTAAACGCATAAATGC‑CTGATGCGCTACGCTTATCAGGCCTACATCACTCCTGCAATCTTTTGGCTTTGCATCATTTGTAGGCCg > 1:566006/1‑143 (MQ=38) aCTAATTACCACAGACATAGCACCTCAGAATTAAAAAGGGCGAGGTTATCCCTCACCCTAAACGCATAAATGC‑CTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATAATTTGTAGGCCgg > 2:156004/1‑143 (MQ=255) tAATTCCCACAGAGATAGCACCTCAGAATTAAAAAGAGCGAGGTTATCCCTCACCCTAAACGCATAAATGC‑CTGATGCGCTACGCTTATCCGGCCTACATAACTCCTGACACACATTAGATTTGCATGATTTGTAGCCCGGAt > 1:372112/1‑143 (MQ=37) tAATTACCACAGACATAGCACCTCAGAATTAAAAAGGGCGAGGTTATCCCTCACCCTACACGCATAAATGC‑CTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTCTGGATTGGCATGATTGCGAGGCCGGag > 1:25500/1‑142 (MQ=38) tACCACAGACATAGCACCTCAGAATTAAAAAGGGCGAGGTTATCCCTCACCCTAAACGCATAAATGC‑GTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTATGGATTTGCATGATTTGTAGGCCGGAGAAgg > 1:439257/1‑143 (MQ=255) tACCACAGACATAGCACCTCAGAATTAAAAAGGGCGAGGTTATCCCTCACCCTAAACGCATAAATGC‑CTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAgg > 2:682470/1‑143 (MQ=255) cacaGACATAGCACCTCAGAATTAAAAAGGGCGAGGTTATCCCTCACCCTAAACGCATAAATGC‑CTGAGGCGCTACGCTTATCAGACCTACATAACTTTTGGTATTTTTTGGATTTGCATGATTTGTAGGCCGGCTAAGGCGt > 1:588401/1‑143 (MQ=255) acaGACATAGCACCTCAGAATTCAAAAGGGCGAGGTTATCCCTCACCCTAAACGCATAAATGC‑CTGATGCGCTACGCTTATCAGGCCTCCATAACTCCTGCAATATTTTGGATTTGCATGATTATTAGCCCGGCTAAGTCGtc > 1:286262/1‑142 (MQ=37) acaGACATAGCACCTCAGAATTAAAAAGGGCGAGGTTATCCCTCACCCTAAACGCATAAATGC‑CTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATACGGCGtt > 2:735745/1‑143 (MQ=255) ccATAGCACCTCAGAATTAAAAAGGCCGAGGTTATCCCTCACCCTAAACGCATAAATGC‑CTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATGTTTTGGTTTCACCGAAAATGTAGGACGGATAATGCGTTCAcg < 1:215195/142‑1 (MQ=25) aCATAGCACCTCAGAATTAAAAAGGGCGAGGTTATCCCTCACCCTAAACGCATAAATGC‑CTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATCTTCTGGATTTGCATGATTTGTAGAACGGATAAGGCGTTCAcg > 2:202820/1‑143 (MQ=255) tCAGAATTAAAAAGGGCGAGGTTATCCCTCACCCTAAACGCATAAATGC‑CTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCgg > 2:513304/1‑143 (MQ=255) aaTTAAAAAGGGCGAGGTTATCCCTCACCCTAAACGCATAAATGC‑CTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATGATTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATg > 1:11385/1‑143 (MQ=255) aaTTAAAAAGGGCGAGGTTATCCCTCACCCTAAACGCATAAATGC‑CTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATg > 1:399098/1‑143 (MQ=255) aTTAAAAAGGGCGAGGTTATCCCTCACCCTAAACGCATAAACGC‑CTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATACTTTGGATTTGCATGATTTGTAGGCGGGATAAGGCGTTCACGCCGCATCCGGCATGa > 1:867211/1‑143 (MQ=255) ttAAAAAGGGCGAGGTTATCCCTCACCCTAAACGCATAAATGC‑CTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGaa < 2:668990/143‑1 (MQ=255) aaaaGGGCGAGGTTATCCCTCACCCTAAACGCATAAATGC‑CTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCACCCGGCATGaacaa > 2:760296/1‑143 (MQ=255) gCGAGGTTATCCCTCACCCTAAACGCATAAATGC‑CTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCa < 1:614613/143‑1 (MQ=255) gCGAGGTTATCCCTCACCCTAAACGCATAAATGC‑CTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCa > 2:358929/1‑143 (MQ=255) gAGGTTATCCCTCACCCTAAACGCATAAATGC‑CTGATGCGCTCCGCTTATCAGGCCTACATAACTCCGCCAATCTCATGGCTTACCAAGATTACTACGCAGGAAAAGGCGCACACCCCGCCTCCGGCCAGAAAACCGCCCACt > 1:749270/1‑143 (MQ=16) ctATCCGTCACCCTAAACGCATGAATGC‑CTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGt < 1:654320/142‑1 (MQ=255) gcttacgcTAAACGCATAGATGG‑CTGATGCGCTACGCTTGTCAGGCCTGCATGACTCCTGCAATATGTTGGATTTGCATGAGTTGTAGGCCGGAGAAGGCGTTCACGCCGCATGCGGCATGAACAACGCGCACTTAGTCaata < 1:690167/136‑1 (MQ=21) ccTCACCCTAAACGCATAAATGC‑CTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGGACAACGCGCCCTTAGTccgtc > 1:775788/1‑139 (MQ=255) tCACCCTAAACGCATAAATGC‑CTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGCCCTGAACAACGCCCACTTAGCCaataat > 2:669367/1‑143 (MQ=255) aCCCTAAACGCATAAATGC‑CTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCAATAATCa < 2:832931/143‑1 (MQ=255) cccTAAACGCATAACTGC‑CTGATGCGATACGCTTATCAGGCCTATATAACTCCTGCAATATTTTGGATTTGCATGATCTGTAGGCCGGATAAGGAGTTCACGCCGCATCCCGCATGAACAACGCGCACTTAGTCAATAATCAg < 1:707198/143‑1 (MQ=255) cTAAACGCATAAGTGC‑CTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCAATAATCAGGa < 1:68030/143‑1 (MQ=255) aaCGCATAAATGC‑CTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCAATAATCAGGAtgt < 2:415386/143‑1 (MQ=255) aCGCATAAATGC‑CTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCAATAATCAGGAtgtg > 2:559216/1‑143 (MQ=255) tcATAAATGC‑CTGATGCCCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGTTCTTATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCAATAATCAGGATGTGAg < 1:210547/142‑1 (MQ=25) gCATAAATGC‑CTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCAATAATCAGGATGTGAg < 2:346838/143‑1 (MQ=255) aaTGC‑CTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCAATAATCGGGATGTGAGGTAAc > 1:213318/1‑143 (MQ=255) c‑cTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGGTAAGGCGTTCCCGCCGCGTCCGGCATGCACCACGCGCACTTCGTCACTAATCAGGATGCGAGGATACCACt > 1:149391/1‑143 (MQ=21) tGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGCTAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCAATAATCAGGATGTGAGGTTACCCCTCa > 1:618097/1‑143 (MQ=255) gcTACGCTTATCAGGCCTACATAGCTCCTGGAAGTATTTGTATTTGCATGATTTGTAGGCCGGATAAGGCGTGCACGCCGCAGCCGGCATGAACAACGCGCACTTAGTCAATAATCAGGATGTGAGGTTACCCCTCACCCTGt < 1:203885/143‑1 (MQ=25) gcTACGCGTATCAGGCCTACATAACTCCTGCAAGATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCAATAATCAGGATGTGAGGTTACCCCTCACCCTGt < 1:701042/143‑1 (MQ=255) ttATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCTTTCACGACGCATCCGGCATGAACAACGCGCACTTAGTCAATAATCAGGATGTAAGATTACCGCTAACCCTGTCATATcc > 1:77512/1‑143 (MQ=37) ttATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCAATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATcc > 2:798703/1‑143 (MQ=255) ttAGCAGGCCTACATAACTCCTGCAATAGTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCAATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATcc < 1:347547/143‑1 (MQ=255) tCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCAATAATCAGGATGTGGGGTTACCCCTCCCCCTGTCATATCCGTa > 2:297609/1‑143 (MQ=255) tCACGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGCCCGGAGAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCAATCATCAGGCTGTGAGGTTACCCCTCACCCTCCCATATcgcta > 1:686615/1‑139 (MQ=25) ccTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCAATAATCAGGATGTGAGGTTACCCCTCCCCCTGTCATATCCGTGAAAAc > 2:759184/1‑143 (MQ=255) aCATAACGCCTGCCATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCAATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGc < 2:28333/143‑1 (MQ=255) gcTCCTGGAATATTTTGGTTTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGTCATGAACAACGCGCACTTAGTCACTAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACa < 1:946284/142‑1 (MQ=255) aCTCCTGCAATATTTTGGATTTGCAGGAGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCAATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACa < 2:978201/143‑1 (MQ=255) cTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAGCGCGCACTTAGTCAATAATCAGGATGTGAGGCTACCCCTCACCCTGTCATAACCGTAACAACGGCacacga > 1:871648/1‑141 (MQ=37) tCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGACCAACGCGCACTTAGTCAATCATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATCCAGa > 1:536160/1‑143 (MQ=255) ggacgCAATATTTTGGATTCCCATCATTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCAATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGa < 1:156004/139‑1 (MQ=37) ccTGCAATATTTCGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCAATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGaa < 2:775788/143‑1 (MQ=255) ccTGCAATATTGTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCAATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGaa < 1:492994/143‑1 (MQ=255) cTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCAATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAat > 2:932622/1‑143 (MQ=255) tGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCAATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGaaca > 1:165253/1‑141 (MQ=255) gCAATAGTTTGGATTTGCATGATGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCAATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAatat < 1:614174/143‑1 (MQ=255) cAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTCAGTCAATAATCAGGATGTGAGGTTACCCCTCCCCCTGTCATATCCGTAAAAACGGCCTACAGAATATc > 1:52100/1‑143 (MQ=255) cAACATCTTGGATTTGCATGATTTGTAGGCCGGATACGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGCCAATAATCCGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAATATc < 2:25500/143‑1 (MQ=38) aaTATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCAATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAATATca < 2:744231/143‑1 (MQ=255) aaTATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGATCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCAATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAATATca < 2:318045/143‑1 (MQ=255) ggATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCAATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAATATCACATCAGcc < 2:11385/143‑1 (MQ=255) tttGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCAATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTCAAAACGGCATCCAGACTATCCCATCGGCCGCt > 2:8956/1‑143 (MQ=37) gCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCAATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAATATCACATCAGCCGCTaaa < 2:538155/143‑1 (MQ=255) cATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCAATAATCAGGATGTGAGGTTACCCCGCACGCTGTCGTAACCGTGAAGGCGGCCTACCGAATATCCCATCAGCCGcccaag > 2:268868/1‑138 (MQ=21) aTGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCAATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAATATCACATCCGCCGCTAAAGa > 2:841063/1‑143 (MQ=255) aTGATTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTGACTCAATAATCAGGATGCGAGGTTACCCCTCACCCTGTCATAACCGTAAAAACGGCATACAGAATATCACATCAGCCGCTAAAGa > 1:225478/1‑143 (MQ=38) | ATGCATCACTAATTACCACAGACATAGCACCTCAGAATTAAAAAGGGCGAGGTTATCCCTCACCCTAAACGCATAAATGC‑CTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCAATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAATATCACATCAGCCGCTAAAGA > NC_000913/2945816‑2946092 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |