New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1979489	1 (0.030)	64 (1.670)	39/284	0.0	98.5%	intergenic (‑274/‑264)	insA/uspC	IS1 repressor TnpA/universal stress protein
	?	NC_000913	= 2290111	NA (NA)					intergenic (‑32/+1)	insH1/yejO	IS5 transposase and trans‑activator/pseudogene, autotransporter outer membrane homology,putative transport, Not classified, putative ATP‑binding component of a transport system

AATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1979349‑1979489 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTC‑ATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTT  <  NC_000913/2290111‑2289970                                                                                                                                                                                                                                                                                              AATGAAACAGGAATAATCGAAATGGGATGTTGCGCACATTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAGG                                                                                                                                               <  1:598514/143‑1  ATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCAGCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAGGA                                                                                                                                              <  2:234381/143‑1     AAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAGGAAGG                                                                                                                                           <  1:125692/143‑1      AACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATCCGCTACTTGTAAACAGACACTTACCGCACAACAAACTAAGGAAGGT                                                                                                                                          >  2:56398/1‑143      AACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAACCATCTACTAGATATAATCACTTTCATGCAATACCAGATAAGCTATTTTTACACAGACACTTACCGCCCAACAAACTAAGGAAGGT                                                                                                                                          >  1:268366/1‑143        CAGTAATAATCGCTATGGGATGTTGCGCACAGTCAAATTAACTTACCGTAAATTATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAGGAAGGTGC                                                                                                                                        <  1:181592/143‑1        CAGGAAGAATCGAAATGGGATGGTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAGGAAGGTGC                                                                                                                                        <  1:612601/143‑1            AATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTATTAAACAGACACTTACCGCACAACAAACTAAGGAAGGTGCGAAC                                                                                                                                    >  1:169366/1‑143              caatacacagtGGATCTTGCGAACAGTCAAAATAGCTCACCGTAAATAATCATCTGCTATAAATAATCACTGTCGTGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAGGAAGGTGCGAACAA                                                                                                                                  <  1:53498/132‑1              TAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTAGTTTTAAACAGACACTTACCGCACAACAAACTAAGGAAGGTGCGAACAA                                                                                                                                  <  1:124410/143‑1                 TCGAAATGGGATGTTGCGCACAGTCACAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAGGAAGGTGCAAACAAGTC                                                                                                                               >  1:636979/1‑143                 TCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAGGAAGGTGCGAACAAGTC                                                                                                                               >  2:319304/1‑143                   GAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAAAAAACAAAAGAAGATGAGACAAAGTCCC                                                                                                                             >  1:502766/1‑143                   GAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCAGCTATCAATAATCACTTTCATGCAATACCAGATAAGCTATTCTTGAACAGACCCTTCCCGCACAACAAACTAAGGAAGGTGCGAACAAATCaa                                                                                                                             >  2:237960/1‑141                       TGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAGGAAGGTGCGAACAAGTCCCTGAT                                                                                                                         <  2:371742/143‑1                           ATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAGGAAGGTGCGAACAAGTCCCTGATATGA                                                                                                                     <  1:389826/143‑1                               TGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATC                                                                                                                 >  2:571295/1‑143                                  GCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATG                                                                                                              <  2:294896/143‑1                                  GCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAGGAAGGTGCAAACAAGTCCCTGATATGAGATCATG                                                                                                              >  1:288888/1‑143                                     CAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTCCCGCACAACAAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTT                                                                                                           <  1:402251/143‑1                                     CAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTT                                                                                                           <  2:355393/143‑1                                      AGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACCAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTG                                                                                                          >  1:427188/1‑143                                                ACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTC‑ATCTGGAG                                                                                               >  1:595903/1‑143                                                     CCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTC‑ATCTGGAGCCATA                                                                                          >  2:5714/1‑143                                                      CGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAGGAAGATGCGAACAAGTCCCTGATATGACATCATGTTTGTC‑GTCCGGAGCCATAG                                                                                         >  1:480240/1‑143                                                            TAATCGTCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAAGAGACACGTACCGCACAACAAACGAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTC‑ATCTGGAGCCATAGAACAGG                                                                                   <  1:311321/143‑1                                                             AATCATCTGCTATAAATAATCAGTTGCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAGGAAGGTGCGAACAAGTCCCTGATAGGAGATCATGTTTGTC‑ATCTGGAGCCATAGAACAGGG                                                                                  <  1:31147/143‑1                                                                  TCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCCCAACAAACTAAGGAAGGTCCGAACAAGTCCCTGATATGAAATCATGTTTGTC‑ACCTGGAGCCACAGAACAGGGaccat                                                                             >  1:85742/1‑138                                                                  TCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTC‑ATCTGGAGCCATAGAACAGGGTTCAT                                                                             >  2:614287/1‑143                                                                    TGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTC‑ATCTGGAGCCATAGAACAGGGTTCATCA                                                                           <  2:656042/143‑1                                                                       TATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTC‑ATCTGGAGCCATAGAACAGGGTTCATCATGA                                                                        <  1:632798/143‑1                                                                        ATAAACAATCACTTTCATGCAAGACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTC‑ATCTGGAGCCATAGAACAGGGTTCATCATGAG                                                                       <  2:85371/143‑1                                                                            ATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAGCAGACACTTACCGCACAACGAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTC‑ATCTGGAGCCATAGAACAGGGTTCATCATGAGTCAT                                                                   <  1:669137/143‑1                                                                                TCACTTTCATGCAATACCAGATAAGCTATTTTTAAACATACACTTACCGCACAACAAACTAAGGAAGGTGAGAACAAGTCCCTGATATGAGATCATGTTTGTC‑ATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAAC                                                               <  2:117300/143‑1                                                                                 CACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTC‑ATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACT                                                              >  2:180845/1‑143                                                                                                        GCTATTTTTAAACAGACACTTACCGCACAACAAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTC‑ATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCA                                       >  1:564318/1‑143                                                                                                           cttcTTAAACAGACCCTTACCGCACAACAAACGAAGGAAGGCGCGAACAAGTCCCGGATATGAGATCATGTTCGTC‑ATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCA                                    <  2:201115/139‑1                                                                                                           ATTTTTAAACAGACACTTACCGCACAACAAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTC‑ATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCA                                    >  2:129341/1‑143                                                                                                           ATTTTTAAACAGACACTTACCGCACAACAAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTC‑ATCTGGAGCCAGAGAAGAGGGTTCATCATGAGTCAGCAACGTCCGTTCGCCGACAGGGAATTCAGga                                    >  2:308143/1‑141                                                                                                           ATTTTTAAACAGACACTTACCCAACAACAAACGAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTC‑ATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCA                                    <  2:619950/143‑1                                                                                                                   ACAGACACTTACCGCACAACAAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTC‑ATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGC                            <  2:550880/143‑1                                                                                                                    CAGACACATACCGCACAACAAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTC‑ATCTGGAGCCATAGAACAGGGTTCATCATGAGTCACCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCC                           <  2:551719/143‑1                                                                                                                      GACACTTACCGCACAACAAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTC‑ATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGT                         <  2:56688/143‑1                                                                                                                                  ACAACAAACTAAGGAAGGTGCCAACAAGTCCCTGATATGAGATCATGTTTGTC‑ATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAA             <  2:460333/143‑1                                                                                                                                  ACAACAAACTAAGGAAGGTGCCAACAAGTCCCTGATATGAGATCATGTTTGTC‑ATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAA             <  2:54001/143‑1                                                                                                                                    AACAAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTC‑ATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGA           >  2:391214/1‑143                                                                                                                                    AACAAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTC‑ATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGAGCCGTCAGCCCAGAAAAGA           >  2:148967/1‑143                                                                                                                                    AACAAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCAAGTTTGTC‑ATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCGTCGCCGACAGTGAACTCAGCAGTAAGCGCCGTCCGACCAGACAAGc           >  1:651518/1‑142                                                                                                                                     ACAAACGAAGGAAGGTGCGAAGAAGTCCCTGATATGAGATCATGTTTGTC‑ATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAG          <  2:365391/143‑1                                                                                                                                      cggtgTAAGTAACGTGCGAACAAGTCCCGGATAAGAGATCCTGTTTGTC‑ATCTCGAGCCATAGAACAGGGTTCATCACGAGTCATCAACTTACCTTCGCCGACAGTCAAGTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGA         <  1:371135/138‑1                                                                                                                                      CAAACTAAGGAAGGTGAGAACAAGTCCCTGATATGAGATCATGTTTGTC‑ATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGA         <  1:200698/143‑1                                                                                                                                        AACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTC‑ATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGACAAGAGATT       >  1:594834/1‑143                                                                                                                                         ACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCGATGT‑GATTCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTT      >  1:300582/1‑143                                                                                                                                          CTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTC‑ATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATACAGCAGTAAGCGCCGTCAGACCCGCAAGGAGATTTT     >  1:155296/1‑143                                                                                                                                           TAAGGAAGGTGGCAACTAGTCCCTGATATGAGATCATGTTTGTC‑ATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTCACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTC    <  1:279709/143‑1                                                                                                                                           TAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTC‑ATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCCGAACAGAGATTggc    <  1:448803/143‑4                                                                                                                                           TAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTC‑ATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTC    <  1:499446/143‑1                                                                                                                                           TAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTC‑ATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTC    <  2:641388/143‑1                                                                                                                                           TAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTC‑ATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAAATCGGCAGTAAGCGCCGTCAGACCAGAAAAGAGATATTC    >  1:53648/1‑143                                                                                                                                           TAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTC‑ATCTGGAGCCATAGAACAGGGCTCATCATGAGTCATCACCTTACCTTCGCCGACAGGGAATACCGCGGTAAGCGCCGTCAGACCAAAACAGAGATTTTC    >  1:663934/1‑143                                                                                                                                           TAAGGAAGGTGCGAACAAGTACCTGATATGAGATCATGTTTGTC‑ATCTGGAGCCATAGAGCAGGGATCATCATGAGGCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGGCAGACCAGAAAAGAGACTTTC    >  1:416257/1‑143                                                                                                                                            AAGGAAGGTGCGAACACGTCCCTGATATGAGATCATGTTTGTC‑ATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCT   <  2:381332/143‑1                                                                                                                                            AAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTC‑ATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCT   <  2:614474/143‑1                                                                                                                                             AGGAAGGTGCGAACAAGTATCTGATATGAGATCATGTTTGTC‑ATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAtctcttttctg  <  1:318919/143‑12                                                                                                                                                                                                                                                                                              AATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1979349‑1979489 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTC‑ATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTT  <  NC_000913/2290111‑2289970

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.