| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 647,210 | 0 | A | C | 27.6% | 150.1 / 14.9 | 76 | G100G (GGT→GGG) | citG | 2‑(5''‑triphosphoribosyl)‑3'‑dephosphocoenzyme‑A synthase |
| Reads supporting (aligned to +/- strand): ref base A (44/11); new base C (1/20); total (45/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.33e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GCTGTTGGTACAACCGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTT‑GAAGCAAACGGCCAATTGCCG‑CACATAGCAGCCCTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTTCAGT > NC_000913/646990‑647419 | gcttgtGGTACAACGGTTGACCGGCCGTCAGTGGTGAATTGTTGGTACGCAGTTCGCGACGGGTCGGGCCACGGCAAAAATTTGCCGCCGTAGAAAAAACGGTTGTTGGCGTTACCGGTTGTTTGAGTT‑GAAGCAAACGGCCAATTGCCG‑CACATAGCACCCCAAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTCCGCCCGCAGGGGCGCGGAACATATCCCCTTCGc < 2:197315/223‑1 (MQ=255)gCTGTTGGTACAACCGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTT‑GAAGCAAACGGCCAATTGCCG‑CACATAGCAGCCCTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCa > 1:15822/1‑229 (MQ=255) aCAACCGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTT‑GAAGCAAACGGCCAATTGCCG‑CACATAGCAGCCCTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCCGTGGCCCGGAACATATCACCTTCGCAAGCCATAcc > 2:1524526/1‑229 (MQ=255) ctttGCCCTGCCGTAAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCGGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTT‑GAAGCAAACGGCCAATTGCCG‑CACATAGCAGCCCTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCa < 2:844123/205‑1 (MQ=255) cGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTT‑GAAGCAAACGGCCAATTGCCG‑CACATAGCAGCCCTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCa > 1:845603/1‑207 (MQ=255) cGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTT‑GAAGCAAACGGCCAATTGCCG‑CACATAGCAGCCCTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTg > 1:1061062/1‑229 (MQ=255) ttGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTT‑GAAGCAAACGGCCAATTGCCG‑CACATAGCAGCCCTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTggg > 1:704268/1‑229 (MQ=255) ttGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTT‑GAAGCAAACGGCCAATTGCCG‑CACATAGCAGCCCTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTggg > 1:1233986/1‑229 (MQ=255) gACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTT‑GAAGCAAACGGCCAATTGCCG‑CACATAGCAGCCCTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCg > 1:183892/1‑229 (MQ=255) gACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTT‑GAAGCAAACGGCCAATTGCCG‑CACATAGCAGCCCTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCg > 1:1294600/1‑229 (MQ=255) ccGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTT‑GAAGCAAACGGCCAATTGCCG‑CACATAGCAGCCCTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCa > 1:1032830/1‑205 (MQ=255) ccGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTT‑GAAGCAAACGGCCAATTGCCG‑CACATAGCAGCCCTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATcc > 1:229834/1‑229 (MQ=255) gTCGGTGGTGAATTATGGGTCCGAAGTCGGCGAGGGTGCGGGCCGGGGCAAAAACTCGCCGCCGTAAAAAAACCGGTTGTGGGCTTTCCCGGTTGGTTGAGTT‑GAAGCAAACGGCCAATTGCCG‑CAAATAGCAGCCCAAAAGAAAAAATG‑CTGCCTTTATGCGTTTTTCCGCCCGCGGTGGCGCGGAAAATATCCCCTTCGCAAGCCATACCAATTGGGCGTAAt < 2:222787/225‑1 (MQ=255) tgAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTT‑GAAGCAAACGGCCAATTGCCG‑CACATAGCAGCCCTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCCCGGAACATATCACCTTCGCCAGCCATACCAATTGGGCGTAATCCGTGGAGTAc > 2:905689/1‑228 (MQ=255) ttGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTT‑GAAGCAAACGGCCAATTGCCG‑CACATAGCAGCCCTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAATCCATACCAATTGGGCGTAATCCGTGGAGCAACACTTCt > 1:1888020/1‑228 (MQ=255) ggagggCCACGGCAGAATGTGCCCGCCGTAGAACAAACGTTTGTGGGCGTTACCGTTTGGTTGAGTG‑GAAGCAAACGGCCAATTGCCG‑CACAGAGCAGCCCTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAg < 2:1884799/224‑1 (MQ=255) gTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTT‑GAAGCAAACGGCCAATTGCCG‑CACATAGCAGCCCTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGACCATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAgg > 2:1866251/1‑229 (MQ=255) gTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTT‑GAAGCAAACGGCCAATTGCCG‑CACATAGCAGCCCTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAgg > 1:652927/1‑229 (MQ=255) gTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTT‑GAAGCAAACGGCCAATTGCCG‑CACATAGCAGCCCTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGGGCCATTTCCGCACTACAgg > 1:1143290/1‑229 (MQ=255) gTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTT‑GAAGCAAACGGCCAATTGCCG‑CACATAGCAGCCCTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGAACCGCTTCTGGTGCCATTTCCGCACTACAgg > 1:1881510/1‑229 (MQ=255) ggCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTT‑GAAGCAAACGGCCAATTGCCG‑CACATAGCAGCCCTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGAACAACAGGCACCAAATTc > 1:1195880/1‑229 (MQ=255) acggtGCCGCCGTAAAAAAAGCGGTTGTTGGCGGTACGGGTTGTGTGAGGG‑GGACCAACCGGCAAATTGCCC‑CACATAGCAGCCGAAAAGAAAAAATG‑CTTCCTTTATGCGTTTTTGCGCCCGCAGTGGCGCGGAAAATTCCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGa < 2:508126/224‑1 (MQ=255) cccctgTAGAACAAACGGTTGTGGGCGTTACCGGTTGGTTGAGTT‑GAAGCAAACGGCCAATTGCCG‑CACATAGCAGCCCTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAAAATATCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACggg < 1:1978965/223‑1 (MQ=255) cgaaGAACAACCGGTTGTTGGATTTTCGGGGTGGTTGATTG‑GAAGAAAACGGCCAATTGCAGACACA‑AGCAGCCCTAAAAAAAAAATG‑CTGCTTTTCGGCGTTTTTTCGCCAGACGTGGCGCGGAACATATCACCTGCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTagc < 2:1193798/226‑1 (MQ=255) ccGGTTGTTGGCGTTACCGGTTGG‑TGAGTTGGAAGAAAACGGCCAATTGCCG‑CACATAGCAGCCCAAAAAAAAAAATG‑CTGCCTTTATGCGTTTTTCCGCCCGCGGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAAt < 2:1281950/142‑1 (MQ=255) aCGGTTGTTGGCGTTACCGGTTGGTTGAGTT‑GAAGCAAACGGCCAATTGCCG‑CACATAGCAGCCCTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAAt > 1:1284178/1‑143 (MQ=255) tgttgGCGTTACCGGTTGGTTGAGTT‑GAAGCAAACGGCCAATTGCCG‑CACATAGCAGCCCTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGcc > 1:839511/1‑229 (MQ=255) ttgGCGTTACCGGTTGGTTGAGTT‑GAAGCAAACGGCCAATTGCCG‑CACATAGCAGCCCTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTAGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACCGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCg > 1:313365/1‑225 (MQ=255) ggCGTTACCGGTTGGTTGAGTT‑GAAGCAAACGGCCAATTGCCG‑CACATAGCAGCCCTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAccg > 1:1552648/1‑229 (MQ=255) gagTTACCGTTGGGTTGATTG‑GAAGCAAACGCCCAATTGCCG‑CACATAGCAGCCTTAAAGAAAAAATG‑CGGCCTTTATGCGTGTTTACGCCGGCGGTGGCGCGGAACATTTCCCCTTCCCAAGCCATACCAATTGGGCGTAAt < 2:705955/141‑1 (MQ=255) gCGTTACCGGTTGGTTGAGTT‑GAAGCAAACGGCCAATTGACG‑CACATAGCAGCCCTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAAt > 1:707198/1‑143 (MQ=255) gtaacgggttggttGAGTG‑GAGGCAAGCGGCCAATTGCCA‑CACAAAGCACCCAAAAAGAAAAAAGC‑CTGCCTTTATGCGTTTTTCCGCCCGCGGGGGCGCGAAACATATCCCCTCCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAgcgcg < 2:838040/222‑1 (MQ=255) gTTCCCGTTTGGTTGAGTT‑GAAGCAAACGGCCAATTGCCG‑CACATAGCCGCCCAAAAGAAAAAATG‑CTGCCTTTAGGCGTGTTTACGCCCGCAGGGGCGCGGAACATATCCCCTTCCCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTcc < 2:1235983/171‑1 (MQ=255) gTTACCGGTTGGTTGAGTT‑GAAGCAAACGGCCAATTGCCG‑CACATAGCAGCCCTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTcc > 1:1238137/1‑171 (MQ=255) gTTACCGGTTGGTTGAGTT‑GAAGCAAACGGCCAATTGCCG‑CACATAGCAGCCCTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCCGCCCCGAATCGccgtccgcc > 2:1061280/1‑222 (MQ=255) tt‑gaAGCAAACGGCCAATTGCCG‑CACATAGCAGCCCTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCCGAATCGCCAGCGCGCTGCGGTGGAAATCTTc > 1:1332881/1‑228 (MQ=255) taagacAAGCGGCAAGTGGCCG‑CACATGGCA‑CCCTAAAAAAAAAAAGTGTTCCTTTGTGTGTGTTTACGCCCGCAGGGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTcc < 2:1683877/223‑1 (MQ=255) ggaAGCAAACGGCCAATTGCCG‑CACATACCAGCCCAAAAGAAAAAAGG‑CTGCCTTTATGCTTGTTTACGCCCGCGGTGGCGGGAAACATTGCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTcc < 2:1141296/227‑1 (MQ=255) aaGCAAACGGCCAATTGCCG‑CACATAGCAGCCCTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTc > 1:1628322/1‑225 (MQ=255) gtccAATTGCCC‑CACATAGCAGCCCTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCata < 1:1806752/225‑1 (MQ=255) ccAATTGCCG‑CACATAGCAGCCCTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCACTTGGGCGTAATCCGAGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCTCGCTGCGGTGGAAATCTTCCAGCGCCATATCtt > 2:245926/1‑229 (MQ=255) cccaTGGCAGCCCTAAAGAAAAAATG‑CTGCCTTTATCCGTTTTTCCGCCCGCAGTGGCGCGGACAATATCCCCTCCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCAc < 1:1599276/226‑1 (MQ=255) cacaTAGCAGCCCTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAgcg < 1:198031/210‑1 (MQ=255) cacaTAGCAGCCCTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAgcg > 2:197689/1‑210 (MQ=255) cacaTAGCAGCCATAAAAAAAAAATG‑CTGCTGTTAGGCGTGTTTCCGCCCGCGGTGGCGCGGAACATATCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCAc < 1:1527167/228‑1 (MQ=255) acaTAGCAGCCCTAAAGAAAAACTG‑CTGCCTTTATGCGTGTTTCCGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCAcc < 1:955946/228‑1 (MQ=255) caTAGCAGCCCTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAACCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGc > 2:1291908/1‑229 (MQ=255) agcagcCCTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTc > 1:1022502/1‑200 (MQ=255) agcagcCCTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGGGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGGGGAAATCTTCCCGCGcc > 1:17954/1‑207 (MQ=255) agcaacACTAAAGAAAAAATG‑CCGCCTTTATGCGTGTTCACGCCCGCGGGGGCGCGGAACATTTCCCCGTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTc < 2:1020704/200‑1 (MQ=255) gcatAAAAAAAAAGTG‑TGGCTTTTATGGGGTTTGCCGCCGGGTGTGGCGCGGAACATATCCCCTGCCAAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATg < 2:1549978/226‑1 (MQ=255) cccTAAAGATAAACTG‑CTGGTTTTATGCGTGTTTACGCACGAAGCTGCCCGGAACATAACACCTTCGCCAGCAATACCAATTGGGCGTCATCCGTGGTGTACCGCTTCGGGGGCCCTGTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGACAGCCCAGCCTCGCCAGCCAGCTTCCGTGAACAGCTGTCAACGCCATATATTTGTGCGCGCCGCAGtgacgg > 2:1499923/1‑224 (MQ=255) cccTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAAt > 2:1963332/1‑81 (MQ=255) cccTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGaaa > 2:1394882/1‑148 (MQ=255) cccTAAAAAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGaaa < 1:1397283/148‑1 (MQ=255) tAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCa > 2:106171/1‑71 (MQ=255) aaGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCAc > 2:583053/1‑57 (MQ=255) aaGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCAc < 1:584074/57‑1 (MQ=255) aaGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCg > 2:1409233/1‑226 (MQ=255) aaaaTG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACg > 2:1463236/1‑228 (MQ=255) tg‑ctgcTTTTATGCGTTTTTCCGCCCGAAGTGGCGCGGAACATATCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGcc < 1:1496559/229‑1 (MQ=255) gcCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGt < 1:676233/94‑1 (MQ=255) gcCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGt > 2:675047/1‑94 (MQ=255) gcCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCAATATCTTTGTGCGCAc > 1:1098886/1‑200 (MQ=255) ttggggttgtTTACGCCGGGAGTGGCGCGGAACATACCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCg < 2:183577/222‑1 (MQ=255) aTGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGCACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGGTAATGCGATCCACGAGGCCTGGTTTCgg > 2:1244739/1‑228 (MQ=255) cGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAAt < 1:1544895/54‑1 (MQ=255) cGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAAt > 2:1542232/1‑54 (MQ=255) gtTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGCTTCGGTGa > 2:765607/1‑225 (MQ=255) tACGCCCGCGGTGCCGCGGAACATATCCCCTTCGCAAGTCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCa < 2:1621128/170‑1 (MQ=255) tACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCa > 1:1623891/1‑170 (MQ=255) ccGCCCGCGGTGGCGCGAAACATCTCCCCTCCCCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGa < 1:1097968/228‑1 (MQ=255) cccgaggTGGAGCGCACCCTATCACCTTCGCACGCCATACCAATTGGGCGTAATCCGTGGAGTCCCGCTTCTGGTGCCATTTCCGCCCTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACt < 2:1878301/222‑1 (MQ=255) gatgggggcgAAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTcc < 2:1144983/148‑1 (MQ=255) cAGTGGCGCGGAACATATCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTcc > 1:1146987/1‑155 (MQ=255) cAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTcc > 1:1929555/1‑155 (MQ=255) cAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTcc < 2:1926252/155‑1 (MQ=255) cAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTtcagt < 1:1411656/229‑1 (MQ=255) | GCTGTTGGTACAACCGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTT‑GAAGCAAACGGCCAATTGCCG‑CACATAGCAGCCCTAAAGAAAAAATG‑CTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTTCAGT > NC_000913/646990‑647419 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |