| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 986,863 | 0 | A | G | 57.1% | 127.4 / 280.8 | 247 | V40V (GTT→GTC) | ompF | outer membrane porin 1a (Ia;b;F) |
| Reads supporting (aligned to +/- strand): ref base A (51/54); new base G (84/56); total (136/111) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.16e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 249 total aligned reads displayed.
ATTTGAGTTTCCCCTTTAAAACCAAGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑AAAATAATGCAGACCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCC > NC_000913/986765‑986962 | tttGAGTTTCCCCTTTAAAACCAAGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGACCGAc < 2:1446273/100‑1 (MQ=255) tttGAGTTTCCCCTTTAAAACCAAGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑AAAATAATGCAGACCAAc > 2:2093163/1‑100 (MQ=255) gTTTCCCCTTTAAAACCAAGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCtt < 2:209879/100‑1 (MQ=255) gTTTCCCCTTTAAAACCAAGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCtt > 1:631480/1‑100 (MQ=255) ttgccccTTAAAAACCAAGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGAAAAAAAAAAA‑AAAATAATGCAGACCAACAGCttt < 2:546988/97‑1 (MQ=255) nttcccTTTAAAACCAAGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTa > 1:206857/4‑100 (MQ=255) ctCCCCTTTAAAACCAAGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑AAAATAATGCAGACCAACAGCTTTa > 1:217756/2‑100 (MQ=255) tCCCCTTTAAAACCAAGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTAc > 1:1386483/1‑100 (MQ=255) tCCCCTTTAAAACCAAGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTAc > 1:1471138/1‑100 (MQ=255) tCCCCTTTAAAACCAAGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTAc > 1:1485266/1‑100 (MQ=255) tCCCCTTTAAAACCAAGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTAc > 1:1637785/1‑100 (MQ=255) cccccTTTAAAACCAAGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTAc > 1:2007195/2‑100 (MQ=255) cccccTTTAAAACCAAGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTAc > 1:2433097/2‑100 (MQ=255) cccccTTTAAAACCAAGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑AAAATAATGCAGACCAACAGCTTTAc > 1:2609749/2‑100 (MQ=255) ccccTTTAAAACCAAGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGC‑GAAATAATGCAGACCGACAGCTTTAcc > 1:997993/1‑100 (MQ=255) ccccTTTAAAACCAAGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTAcc > 1:1910765/1‑100 (MQ=255) ccccTTTAAAACCAAGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTAcc > 1:165481/1‑100 (MQ=255) ccccTTTAAAACCAAGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTAcc > 1:320050/1‑100 (MQ=255) ccccTTTAAAACCAAGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTAcc > 1:936396/1‑100 (MQ=255) ccccTTTAAAACCAAGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTAcc > 1:1084264/1‑100 (MQ=255) ccccTTTAAAACCAAGACGGGCATAGGTCATGTCGCCAATGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATCCAGACCGACAGCTTTAcc > 1:1051944/1‑100 (MQ=255) ccccTTTAAAACCAAGACGGGAATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTAcc > 1:1156862/1‑100 (MQ=255) cccTTTAAAACCAAGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTACCg > 1:520135/1‑100 (MQ=255) ccTTTAAAACCAAGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGAGAAAAT‑ATGCAGACCGACAGCTTTACCGt > 1:25492/1‑100 (MQ=255) cTTTAAAACCAAGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTACCGTa > 1:1871558/1‑100 (MQ=255) cTTTAAAACCAAGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTACCGTa > 1:2384370/1‑100 (MQ=255) cTTTAAAACCAAGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTACCGTa > 1:661329/1‑100 (MQ=255) tttAAAACCAAGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTACCGTAc < 2:1123189/100‑1 (MQ=255) tttAAAACCAAGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTACCGTAc < 2:617412/100‑1 (MQ=255) tttAAAACCAAGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑AAAATAATGCAGACCAACAGCTTTACCGTAc > 1:2329185/1‑100 (MQ=255) ttAAAACCAAGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑AAAATAATGCAGACCAACAGCTTTACCGTACa > 2:1145238/1‑100 (MQ=255) ttAAAACCAAGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑AAAATAATGCAGACCAACAGCTTTACCGTACa < 2:1642109/100‑1 (MQ=255) tAAAACCAAGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTACCGTACAg < 2:2335521/100‑1 (MQ=255) tAAAACCAAGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTACCGTACAg < 2:1885570/100‑1 (MQ=255) aaaCCAAGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTCGC‑GAAATAATGCAGACCGACAGCTTTACCGTACAGAt < 2:2534741/100‑1 (MQ=255) aaaCCAAGACGAGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑AAAATAATGCAGACCAACAGCTTTACCGTACAGAt < 2:150758/100‑1 (MQ=255) aaCCAAGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTACCGTACAGATc < 2:1968785/100‑1 (MQ=255) aaCCAAGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑AAAATAATGCAGACCAACAGCTTTACCGTACAGATc < 1:1279832/100‑1 (MQ=255) aaGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTACCGTACAGATCTACt < 2:1051270/100‑1 (MQ=255) aCGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTACCGTACAGATCTACTttg < 2:1103437/100‑1 (MQ=255) aCGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTATCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTACCGTACAGATCTACTttg < 2:1822517/100‑1 (MQ=255) cGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑AAAATAATGCAGACCAACAGCTTTACCGTACAGATCTACTttgt < 2:1660688/100‑1 (MQ=255) gggCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTACCGTACAGATCTACTttgtt < 2:1139561/100‑1 (MQ=255) ggCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTACCGTACAGATCTACTttgttg < 2:1572115/100‑1 (MQ=255) ggCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTACCGTACAGATCTACTttgttg < 2:849509/100‑1 (MQ=255) ggCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTACCGTACAGATCTACTttgatg < 2:429669/100‑1 (MQ=39) ggCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑AAAATAATGCAGACCAACAGCTTTACCGTACAGATCTACTttgttg < 1:422802/100‑1 (MQ=255) ggCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑AAAATAATGCAGACCAACAGCTTTACCGTACAGATCTACTttgttg > 1:1064332/1‑100 (MQ=255) gCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑AAAATAATGCAGACCAACAGCTTTACCGTACAGATCTACTTTGTTGc > 2:1190201/1‑100 (MQ=255) tAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTACCGTACAGATCTACTTTGTTGCCAt < 2:1251473/100‑1 (MQ=255) ggTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGAGCGACAGCTTTACCGTACAGATCTACTTTGTTGCCATCt > 1:1775853/1‑100 (MQ=255) ggTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑AAAATAATGCAGACCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCt > 1:853476/1‑100 (MQ=255) tCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTACCGTACAGATCTACTTTGTTGCCATCttt < 2:1910259/100‑1 (MQ=255) cctGTCGCCATCGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑AAAATAATGCAGACCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTg > 2:2403699/3‑100 (MQ=255) aTGTCGCCATTGCCACCGTAACTGTTTTCACCGTTAGCCTTGGA‑AAAATAATGCAGACCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGt < 1:2486820/100‑1 (MQ=255) tGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑AAAATAATGCAGACCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGtt < 2:1025408/100‑1 (MQ=255) gTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑AAAATAATGCAGACCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTta > 2:1845128/1‑100 (MQ=255) cGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTtata > 1:1042971/1‑100 (MQ=255) gCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑AAAATAATGCAGACCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAg < 2:2247451/100‑1 (MQ=255) ccATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGa < 2:1444523/100‑1 (MQ=255) ccATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑AAAATAATGCAGACCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGa > 1:1551318/1‑100 (MQ=255) aTTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGAtt < 2:2148203/100‑1 (MQ=255) tGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTc < 2:670090/100‑1 (MQ=255) tGCCACCGGAACTGGTTTCACCGTTTCCCTTGGA‑AAAATAATGCAGCCCAACGGCTTTACCGTACAGATCGACTTTGTTGCCATCTTTGTTATAGAttcc < 2:14743/100‑3 (MQ=37) ccACCGTAACTGTTTTCACCGTTACCCTTGGA‑AAAATAATGCAGACCAACAGCTTTACCGTACAGATCTACTTTGTTTCCATCTTTGTTATAGATTTCTg < 1:2213894/100‑1 (MQ=255) ccGTAACTGTTTTCACCGTTACCCTTGGA‑AAAATAATGCAGACCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAg > 1:2397535/1‑100 (MQ=255) gTAACTGTTTTCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCg < 2:1067589/100‑1 (MQ=255) tAACTGTTTTCACCGTTACCCTTGGA‑AAAATAATGCAGACCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGt > 1:181836/1‑100 (MQ=255) aCTGTTTTCACCGTTACCCTTGGA‑AAAATAATGCAGACCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGttt < 2:438252/100‑1 (MQ=255) gTTTTCACCGTTACCCTTGGA‑AAAATAATGCAGACCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCa < 1:2377741/100‑1 (MQ=255) tttCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGt < 2:1953943/100‑1 (MQ=255) tttCACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGt > 1:959308/1‑100 (MQ=255) cACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTAcc > 1:1589453/1‑100 (MQ=255) cACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTAcc > 1:194681/1‑100 (MQ=255) cACCGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTAcc > 1:1207360/1‑100 (MQ=255) ccttgaCCCTTGGA‑GAAATAATGCAGACCGACAGCTTTACCTTACAGTACTACTTTGTTGCCATCTTTGTTCTAGATGTCAGCAGCGTTTGCAATACCTg < 2:203403/95‑1 (MQ=255) ccGTTACCCTTGGA‑GAAATAATGCAGACCGACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTg > 1:1414257/1‑100 (MQ=255) tcttACCCTTAGA‑GAAATAATGCAGACCCACATCTCTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCCTTTGCAGTACCTGc < 2:2186701/98‑1 (MQ=255) cccTTGGA‑GAAATAATGCAGACCGACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGctacta > 1:784074/1‑100 (MQ=255) cccTTGGA‑AAAATAATGCAGACCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGctacta > 1:410198/1‑100 (MQ=255) cccTTGGA‑AAAATAATGCAGACCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGctacta < 2:714961/100‑1 (MQ=255) ccTTGGA‑GAAATAATGCAGACCGACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTaa > 1:495800/1‑100 (MQ=255) ccTTGGA‑GAAATAATGCAGACCGACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTaa > 1:732718/1‑100 (MQ=255) ccTTGGA‑GAAATAATGCAGACCGACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGAACTCTGCACCGTTTGCAGTAACTGCTACTaa > 1:2639997/1‑100 (MQ=25) ccTTGGA‑AAAATAATGCAGACCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTaa > 1:1885453/1‑100 (MQ=255) ccTTGGA‑AAAATAATGCAGACCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTaa > 2:778731/1‑100 (MQ=255) cTTGGA‑GAAATACTGCAGACCGACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAAc > 1:2272684/1‑100 (MQ=37) cTTGGA‑GAAATAATGCAGACCGACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAAc < 2:131504/100‑1 (MQ=255) cTTGGA‑AAAATAATGCAGACCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAAc > 2:343605/1‑100 (MQ=255) ttGGA‑AAAATAATGCAGACCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACa > 2:2565880/1‑100 (MQ=255) tGGA‑GAAATAATGCAGACCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCGGCGTTTGCAGTACCTGCTACTAACag > 1:1697971/1‑100 (MQ=255) tGGA‑AAAATAATGCAGACCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACag < 2:889393/100‑1 (MQ=255) ggA‑GAAATAATGCAGACCGACAGCTTTACCGTACAGAGCTACTTTGTTGCGATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACaga > 1:1977641/1‑100 (MQ=255) gA‑AAAATAATGCAGACCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACagag > 2:1379148/1‑100 (MQ=255) gA‑AAAATAATGCAGACCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACagag < 1:326852/100‑1 (MQ=255) aataatGCAGACCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAgg > 1:144896/1‑100 (MQ=255) aataatGCAGACCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAgg < 1:1398556/100‑1 (MQ=255) aatGCAGACCGACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGAc < 2:314028/100‑1 (MQ=255) ccAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCCGGGACGATCACTg > 2:1598393/1‑100 (MQ=255) ccAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATAACTg < 2:648935/100‑1 (MQ=255) | ATTTGAGTTTCCCCTTTAAAACCAAGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGA‑AAAATAATGCAGACCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCC > NC_000913/986765‑986962 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |