| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,314,509 | T→C | V341A (GTC→GCC) | rcsD → | phosphotransfer intermediate protein in two‑component regulatory system with RcsBC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,314,509 | 0 | T | C | 97.7% | 288.1 / ‑3.0 | 87 | V341A (GTC→GCC) | rcsD | phosphotransfer intermediate protein in two‑component regulatory system with RcsBC |
| Reads supporting (aligned to +/- strand): ref base T (1/1); new base C (36/49); total (37/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.85e-01 | |||||||||||
ATTCTGCTGCCACTGCTGCTGAACATCGGTTTGCTGGCGCTGGCGTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑TCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCACTGCTGCCGCTCGGCCTGCTGGTTCACGATC > NC_000913/2314412‑2314604 | aTTCTGCTGCCACTGCTGCTGAACATCGGTTTGCTGGCGCTGGCGTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑ccc < 2:958627/100‑1 (MQ=255)aTTCTGCTGCCACTGCTGCTGAACATCGGTTTGCTGGCGCTGGCGTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑ccc < 2:1436682/100‑1 (MQ=255) ttCTGCTGCCACTGCTGCTGAACATCGGTTTGCTGGCGCTGGCGTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑cccc > 1:1674337/1‑100 (MQ=255) tCTGCTGCCACTGCTGCTGAACATCGGTTTGCTGGCGCTGGCGTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑Ccccc > 2:2116459/1‑100 (MQ=255) tCTGCTGCCACTGCTGCTGAACATCGGTTTGCTGGCGCTGGCGTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑Ccccc < 1:2060076/100‑1 (MQ=255) tCTGCTGCCACTGCTGCTGAACATCGGTTTGCTGGCGCTGGCGTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑Ccccc > 1:947010/1‑100 (MQ=255) tCTGCTGCCACTGCTGCTGAACATCGGTTTGCTGGCGCTGGCGTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑Ccccc < 1:1576145/100‑1 (MQ=255) tCTGCTGCCACTGCTGCTGAACATCGGTTTGCTGGCGCTGGCGTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑Ccccc < 2:661959/100‑1 (MQ=255) ctgctgCCACTGCTGCTGAACATCGGTTTGCTGGCGCTGGCGTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCa < 2:1608991/100‑1 (MQ=255) gctgcCACTGCTGCTGAACATCGGTTTGCTGGCGCTGGCGTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGc < 2:1703386/100‑1 (MQ=255) gctgcCACTGCTGCTGAACATCGGTTTGCTGGCGCGGGCGTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGc < 2:2560726/100‑1 (MQ=255) ccACTGCTGCTGAACATCGGTTTGCTGGCGCTGGCGTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCAcgg > 2:2002599/1‑100 (MQ=255) cACTGCTGCTGAACATCGGTTTGCTGGCGCTGGCGTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCAcggc < 1:1236739/100‑1 (MQ=255) aCTGCTGCTGAACATCGGTTTGCTGGCGCTGGCGTTATTTGGCTATACCACATTCCGCCATTTCGCCAGCCGCAGTACAGAAAACG‑CCCCCAGCAcggcg < 2:1222876/100‑1 (MQ=255) ctgctgctgAACATCGGTTTGCTGGCGCTGGCGTTATTTGGCTCTACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCAcggcgg < 2:1842108/100‑1 (MQ=255) ctgctgctgAACATCGGTTTGCTGGCGCTGGCGTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCAcggcgg < 2:548337/100‑1 (MQ=255) ctgctgctgAACATCGGTTTGCTGGCGCTGGCGTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCAcggcgg < 1:1371310/100‑1 (MQ=255) ctgctgctgAACATCGGTTTGCTGGCGCTGGCGTTATTAGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCAcggcgg < 2:1189586/100‑1 (MQ=255) tgctgctgAACATCGGTTTGCTGGCGCTGGCGTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGt < 2:931490/100‑1 (MQ=255) gctgctgAACATCGGTTTGCTGGCGCTGGCGTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTc < 2:1289793/100‑1 (MQ=255) tgctgAACATCGGTTTGCTGGCGCTGGCGTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCaa > 1:1745257/1‑100 (MQ=255) ctgAACATCGGTTTGCTGGCGCTGGCGTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATa < 2:1917332/100‑1 (MQ=255) tgAACATCGGTTTGCTGGCGCTGGCGTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATaa > 1:1801697/1‑100 (MQ=255) gAACATCGGTTTGCTGGCGCTGGCGTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAAc > 1:671331/1‑100 (MQ=255) gAACATCGGTTTGCTGGCGCTGGCGTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAAc < 1:519149/100‑1 (MQ=255) gAACATCGGTTTGCTGGCGCTGGCGTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAAc > 2:1533502/1‑100 (MQ=255) aCATCGGTTTGCTGGCGCTGGCGTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGa > 1:2270555/1‑100 (MQ=255) tCGGTTTGCTGGCGCTGGCGTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAAtt > 2:305470/1‑100 (MQ=255) cGGTTTGCTGGCGCTGGCGTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTg > 2:255476/1‑100 (MQ=255) cGGTTTGCTGGCGCTGGCGTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTg > 1:805230/1‑100 (MQ=255) tGCTGGCGCTGGCGTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCAt > 1:363122/1‑100 (MQ=255) ctggcgctggcgTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCAttt < 2:2014172/100‑1 (MQ=255) ctggcgctggcgTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCAttt < 1:582803/100‑1 (MQ=255) ctggcgctggcgTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCAttt > 1:2207784/1‑100 (MQ=255) ggcgctggcgTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTa > 2:920811/1‑100 (MQ=255) gcgctggcgTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTAc < 1:1003041/100‑1 (MQ=255) ctggcgTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACggg < 2:1772309/100‑1 (MQ=255) ctggcgTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATAGCGCATTTTACggg < 1:1543715/100‑1 (MQ=255) tggcgTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACTGGc < 1:2029416/100‑1 (MQ=255) tggcgTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGc < 1:2303513/100‑1 (MQ=255) ggcgTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGca > 1:2642653/1‑100 (MQ=255) cgTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACGCCCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGcaa > 2:1870136/1‑100 (MQ=255) cgTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGcaat > 1:1406929/1‑100 (MQ=255) gTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGcaatc < 1:1546102/100‑1 (MQ=255) gTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGcaatc > 2:398631/1‑100 (MQ=255) ttATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGcaatca > 1:1805108/1‑100 (MQ=255) tATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGcaatcaa < 2:1402660/100‑1 (MQ=255) gCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAaga < 1:1423090/100‑1 (MQ=255) gCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAaga < 1:1133208/100‑1 (MQ=255) gCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAaga < 1:1798033/100‑1 (MQ=255) cTATACCACATGCCGCCATTTCTCCAGCCGGAGTACAGAAAACG‑CTCCCAGCACGGCGGGAAACAACGAATTGCGCATTTTACGGGCAATCAAGGGagag < 2:2441077/100‑1 (MQ=255) aCCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAg < 1:511879/100‑1 (MQ=255) ccACATGCCGCCATTTCTACAGCCGCAGTACAGAAAACG‑CCCCCAGTACGGCGCACAATAACGAATTGCACCTTGTACGGGCAATCAATGAAGAGATCGt > 2:890748/1‑100 (MQ=255) cacaTTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAGtc < 1:433706/100‑1 (MQ=255) acaTTCCGCCAGTTCTCCAGCCGCAGTACAGAAAACG‑CCCGCAGCACGGCGGTCAATAACGAATTGCGCATTCTACGGGCAATCAAAGAAGAGATAGtct < 1:2327404/100‑1 (MQ=255) ttCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCAc < 1:2436600/100‑1 (MQ=255) ctCCGCCATTTCGCCAGCCGCAGTACAGACAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCAc < 2:1528257/99‑1 (MQ=255) tCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCAct < 1:2069824/100‑1 (MQ=255) tCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCAct > 1:694340/1‑100 (MQ=255) cGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCActgc < 1:1031845/100‑1 (MQ=255) cGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCActgc > 1:1265057/1‑100 (MQ=255) cGCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCActgc > 1:1575231/1‑100 (MQ=255) gCCATTTCTCCAGCCGCAGTACAGAAAACG‑TCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCActgct < 1:1287479/100‑1 (MQ=255) gCCATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCAAGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGCGATAGTCTCActgct < 2:516470/100‑1 (MQ=255) ccATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCActgctg > 1:25306/1‑100 (MQ=255) cATTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCACtgctgc < 2:126573/100‑1 (MQ=255) aTTTCTCCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAGTTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCACTGCTGcc > 2:2322301/1‑100 (MQ=255) ctcCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCACTGCTGCCGCTc > 1:1080237/1‑100 (MQ=255) tcCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCACTGCTGCCGCTCg < 1:311225/100‑1 (MQ=255) tcCAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCACTGCTGCCGCTCg > 1:85906/1‑100 (MQ=255) ccAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGGGATAGTCTCACTGCTGCCGCTCgg < 1:1346282/100‑1 (MQ=255) ccAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCACTGCTGCCGCTCgg < 2:1069090/100‑1 (MQ=255) ccAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCAGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCACTGCTGCCGCTCgg < 2:2018143/100‑1 (MQ=255) cAGCCGCAGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCACTGCTGCCGCTCGGc > 1:1594790/1‑100 (MQ=255) gccgTACAGAAAACG‑CCCCCCGCACGGCTGTCCATAACGAAGTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCACTGCTGCCGCTCGGCctgct < 2:1157883/97‑1 (MQ=255) aGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCACTGCTGCCGCTCGGCCTGCTgg > 2:2418686/1‑100 (MQ=255) aGTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCACTGCTGCCGCTCGGCCTGCTgg < 1:329647/100‑1 (MQ=255) gTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCACTGCTGCCGCTCGGCCTGCTGGt > 2:501318/1‑100 (MQ=255) gTACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCACTGCTGCCGCTCGGCCTGCTGGt < 2:796305/100‑1 (MQ=255) tACAGAAAACGCCCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCACTGCTGCCGCTCGGCCTGCTGGt < 1:1895192/100‑1 (MQ=255) tACAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCACTGCTGCCGCTCGGCCTGCTGGtt < 2:941308/100‑1 (MQ=255) aCAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCACTGCTGCCGCTCGGCCTGCTGGTTc < 2:1872247/100‑1 (MQ=255) cAGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCACTGCTGCCGCTCGGCCTGCTGGTTCa > 2:2302408/1‑100 (MQ=255) aGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCACTGCTGCCGCTCGGCCTGCTGGTTCAc > 2:807744/1‑100 (MQ=255) aGAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCACTGCTGCCGCTCGGCCTGCTGGTTCAc > 1:22914/1‑100 (MQ=255) gAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCACTGCTGCCGCTCGGCCTGCTGGTTCACg > 1:2137752/1‑100 (MQ=255) gAAAACG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCACTGCTGCCGCTCGGCCTGCTGGTTCACg < 2:291152/100‑1 (MQ=255) aaaCG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCACTGCTGCCGCTCGGCCTGCTGGTTCACGAt > 2:805179/1‑100 (MQ=255) aaaCG‑CCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCACTGCTGCCGCTCGGCCTGCTGGTTCACGAt > 1:2262845/1‑100 (MQ=255) aaCG‑TCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCACTGCTGCCGCTCGGCCTGCTGGTTCACGATc > 2:1782745/1‑100 (MQ=255) | ATTCTGCTGCCACTGCTGCTGAACATCGGTTTGCTGGCGCTGGCGTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACG‑TCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCACTGCTGCCGCTCGGCCTGCTGGTTCACGATC > NC_000913/2314412‑2314604 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |