| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,809,774 | (T)7→6 | coding (158/738 nt) | ygaZ → | putative L‑valine exporter, norvaline resistance protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,809,768 | 0 | T | . | 93.6% | 713.1 / 39.4 | 171 | coding (152/738 nt) | ygaZ | putative L‑valine exporter, norvaline resistance protein |
| Reads supporting (aligned to +/- strand): ref base T (7/4); new base . (88/72); total (95/76) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.57e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 194 total aligned reads displayed.
GATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGACC > NC_000913/2809669‑2809862 | gATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGt > 2:4837519/1‑100 (MQ=255) aTGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGtt < 2:192403/100‑1 (MQ=255) tGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGttt < 1:4362002/100‑1 (MQ=255) cAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGttttt > 1:5122927/1‑100 (MQ=255) aaaGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGtttttt > 1:4527897/1‑100 (MQ=255) aaaGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGtttttt < 1:1780657/100‑1 (MQ=255) gACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGttttttctc < 1:1178740/100‑4 (MQ=255) gACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGttttttctc > 2:2026079/1‑97 (MQ=255) cAGTTTACCGATTGATATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCt > 2:3214868/1‑100 (MQ=255) gTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGc < 1:2051435/100‑1 (MQ=255) gTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGc > 2:4654499/1‑100 (MQ=255) gTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACACGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGc > 2:2918548/1‑100 (MQ=255) ttACCGATTGTTATTAGTTATATTCCGGTAGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGcat > 2:1145289/1‑100 (MQ=255) ccGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGcatcat < 2:5013241/100‑1 (MQ=255) gATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCAttt > 1:4386790/1‑100 (MQ=255) gATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCAttt > 2:1474863/1‑100 (MQ=255) aTTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTa > 2:3141959/1‑100 (MQ=255) tGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATg > 2:3569532/1‑100 (MQ=255) tGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATg < 2:3587038/100‑1 (MQ=255) tGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATg < 1:2889027/100‑1 (MQ=255) gTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGc > 2:4014948/1‑100 (MQ=255) gTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGc > 2:2622804/1‑100 (MQ=255) cttattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGc < 2:4602386/99‑1 (MQ=255) ttattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCa > 1:3140895/1‑100 (MQ=255) ttattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCa > 1:2339008/1‑100 (MQ=255) tattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCTTCTTTTATGCAg > 2:2321870/1‑100 (MQ=255) tattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAg > 1:1830345/1‑100 (MQ=255) attaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGTTTCTTTTATGCAgg > 2:1308573/1‑100 (MQ=255) attaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCaag > 1:2728459/1‑98 (MQ=255) ttaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGgc > 2:1119219/1‑100 (MQ=255) ttaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATAAATGATGCAgga < 2:3749279/100‑2 (MQ=255) tataTTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAg > 2:3148616/1‑100 (MQ=255) atatTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGGTTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCCTCATTTATGCAGGCGCGAGc > 1:5154759/1‑100 (MQ=255) tcttCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGcc < 1:794088/98‑1 (MQ=255) tatTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGcc < 1:678595/100‑1 (MQ=255) tatTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGcc < 1:3127183/100‑1 (MQ=255) tatTCCGATGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGCATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGcc < 1:4729123/100‑1 (MQ=255) atTCCGGTGGCCTTTGCGTTCGGTCTGAATGCCACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTTCTTCATTTATGCATGCGCGAGCCa > 2:4572027/1‑100 (MQ=255) ttCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAg > 1:4218588/1‑100 (MQ=255) ccGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTTTTTT‑TTCTTTATCTTTTATGCAGGCGCGAGCCAGtt > 2:3205202/1‑100 (MQ=255) ccGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGtt < 2:1884248/100‑1 (MQ=255) cGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTc < 2:1685041/100‑1 (MQ=255) cGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTc > 2:3652210/1‑100 (MQ=255) cGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTc < 1:3177486/100‑1 (MQ=255) ggTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCg > 1:1680721/1‑100 (MQ=255) ggTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCg > 1:2843863/1‑100 (MQ=255) ggTGGCATTTGCGTTCGGTATGACTGCGACCCGTCTGGGATCCTCTCCCCGCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGGGCCAGTTCg > 2:2421677/1‑100 (MQ=255) gTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTGATGCAGGCGCGAGCCAGTTCGt < 1:4312475/100‑1 (MQ=255) ggCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCa < 2:1658044/100‑1 (MQ=255) ccTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCAtt > 1:4956023/1‑100 (MQ=255) ccTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCAtt < 2:446020/100‑1 (MQ=255) ccTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCAtt > 2:1324471/1‑100 (MQ=255) ccTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCAtt > 2:3761852/1‑100 (MQ=255) tttGCGTTCGGTCTGAATGTGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTAc > 2:2964318/1‑100 (MQ=255) tttGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTTTTTT‑TTTTTCTTCATTTATGCAGGCGCGAGCCAGTTCGTCATTAc > 2:1378482/1‑100 (MQ=255) tttGCGTTCGGTCTGAACGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTCTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTCCGTCATTAc < 2:1234155/100‑1 (MQ=255) tGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcg > 2:2268358/1‑100 (MQ=255) gCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcgc < 1:1889777/100‑1 (MQ=255) tgTTCGGTCTGACTGCGACCCTTCTGGGACTCTCTCCTCTCGAAAGCG‑GTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCCTTACcgca < 2:2733893/99‑2 (MQ=255) cTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGc < 2:545148/100‑1 (MQ=255) cTGAATGCGACCCGTCTGGGATTCCCCCCTCTCGAAAGCG‑TTTTTTCTACTGCTTCATTTATGCGGGCGCGAGCCAGTCCGTCATTACCGCGATGCTGGc < 2:2787424/100‑1 (MQ=255) tGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGGCATTACCGCGATGCTGGCa > 2:2298444/1‑100 (MQ=255) gAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAg > 1:4069123/1‑100 (MQ=255) aTGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGcc > 2:33728/1‑100 (MQ=255) gCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCgg < 1:4989205/100‑1 (MQ=255) gACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGa > 1:4157975/1‑100 (MQ=255) gACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGa > 2:1009236/1‑100 (MQ=255) gACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGa < 1:1310801/100‑1 (MQ=255) cccGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagt > 2:3267009/1‑100 (MQ=255) cccGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagt > 2:4432330/1‑100 (MQ=255) ccGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagta < 1:3468636/100‑1 (MQ=255) tCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGtt < 1:3814298/100‑1 (MQ=255) tGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtg < 2:1300779/100‑1 (MQ=255) gggATTCTCTCCTCTCGAAAGCGTTTTTTT‑TTTTTCTTTATTGCTGCAAGCGCAGGCCATATCGTCATTACAGCGCTGCTGGCAGCGGGGggtagcccgt > 2:1622422/1‑95 (MQ=255) gggATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgt < 1:2951612/100‑1 (MQ=255) gggATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgt > 1:3243386/1‑100 (MQ=255) ggATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgtg < 1:2406596/100‑1 (MQ=255) gATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTgg > 1:4803356/1‑100 (MQ=255) gATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTgg > 1:1133343/1‑100 (MQ=255) gATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTgg < 1:599640/100‑1 (MQ=255) ttCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGAt > 1:3556703/1‑100 (MQ=255) ctctcctctcGAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGAtt > 2:831126/1‑100 (MQ=255) tctcctctcGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgc < 1:1629160/100‑1 (MQ=255) tctcctctcGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgc < 1:2316574/100‑1 (MQ=255) tcgcctctcGAACGCG‑TTTTTTCTCCTGCATCAGTTATGCAGGCGCGGGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgc < 2:4633707/97‑1 (MQ=255) ctcctctcGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgct > 1:3297652/1‑100 (MQ=255) tcctctgGAAAGCG‑GTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctg < 2:4518463/100‑1 (MQ=255) tcctctcGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctg > 2:216327/1‑100 (MQ=255) tcctctcGAAAGCG‑TTTTTTCGCGTGCATCATGTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctg < 2:1507609/100‑1 (MQ=255) cctctcGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctgc > 1:1548880/1‑100 (MQ=255) cctctcGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctgc > 2:1401060/1‑100 (MQ=255) cctctcGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctgc < 1:370039/100‑1 (MQ=255) cctctcGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgcaga > 2:2289096/1‑97 (MQ=255) ctctcGAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctgc < 1:844411/100‑1 (MQ=255) ctctcGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCa < 1:2484799/100‑1 (MQ=255) tctcGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCAc < 2:3106080/100‑1 (MQ=255) tctcGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCAc > 2:1835043/1‑100 (MQ=255) atctgAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCAc < 1:3530729/96‑1 (MQ=255) gAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCAcagat > 2:3491952/1‑96 (MQ=255) aaaGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGAc < 1:1960000/100‑1 (MQ=255) | GATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGACC > NC_000913/2809669‑2809862 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |