| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,745,019 | 0 | C | G | 43.6% | 29.7 / 15.9 | 39 | G72G (GGC→GGG) | yiaN | 2,3‑diketo‑L‑gulonate TRAP transporter large permease protein |
| Reads supporting (aligned to +/- strand): ref base C (12/10); new base G (8/9); total (20/19) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.51e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GCTTAATCATGGCTGTGCTGATTTTTCTGGGCTGTCTGTTGGGTGGTATTGCTATCGGTTTGCCTATTGCCTGGGCACTGTTGTTGTGCGGGGCGGCGTTAATG‑TTCTGGC‑TGGACATGTTTGATGTCCAG‑ATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGTGAAA‑TCATGAATGCGGGCGGCTTGTCAAAACGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGC‑TGGGCTACGTCGGCGTGCTGGCAGCTA‑TGATTATGGCGAG‑CCTTTCTGGTTCTGCCG‑TTGCGGATACCGCCGCCGTTGCCGCTCTACTGGTGCCGA‑TGATGCGCAGCGCCAACTATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCC > NC_000913/3744796‑3745255 | gCTTAATCATGGCTGTGCTGATTTTTCTGGGCTGTCTGTTGGGTGGTATTGCTATCGGTTTGCCTATTGCCTGGGCACTGTTGTTGTGCGGGGCGGCGTTAATG‑TTCTGGC‑TGGACATGTTTGATGTCCAG‑ATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGTGAAA‑TCATGAATGCGGGCGGCTTGTCAAAACg < 1:1125288/238‑1 (MQ=255) tgCTGATTTTTCTGGGCTGTCTGTTGGGTGGTATTGCTATCGGTTTGCCTATTGCCTGGGCACTGTTGTTGTGCGGGGCGGCGTTAATG‑TTCTGGC‑TGGACATGTTTGATGTCCAG‑ATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGGGGAA‑ACATTAATGTGGGGGGCTTTTCCAAAAGCCTTGTTTAACTGCCg > 1:466351/1‑239 (MQ=255) cTGATTTTTCTGGGCTGTCTGTTGGGTGGTATTGCTATCGGTTTGCCTATTGCCTGGGCACTGTTGTTGTGCGGGGCGGCGTTAATG‑TTCTGGC‑TGGACATGTTTGATGTCCAG‑ATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGTGGAA‑TTATGAAATCGGGGGGGCTTTCAAAAAGCATTGTTTACCCGcc > 1:1513335/1‑236 (MQ=255) tttttgtTGGGTGGTTTTGCTTTCGGTTTGCCTATTGCCGGGGCATTGTTGTTGTGGGGGGCGGCGTTAAGG‑TTCGGGC‑TGGACATTTTTGATGTCCAG‑ATCATGGCACAACCGCTGGTGAACGGGGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGGGGGTAAAA‑TAATGAAGGCGGGCGGTTTGTAAAAACGCATTGTTGCCCTGCCGATGAAACTGGTGGGGc < 2:703244/234‑1 (MQ=255) tgtttgtgggtgggATTGCTAGCGTTTTGCCTATTGCCTGGGCGCTGTTGTTGTGCGGGGGGGCTGTAATG‑TTCTGGC‑TGGACATGTTTGATG‑CCAGAATCAAGCCACAACCGTGGGAGAGGGGAGCCATTAGCTTCCCCCGGCTGGCTATTCCGTTCTTTGTGCTGGAGGGTAAAA‑TAAAGAAGGGGGGGGGTTTGTAAAAACGCTTTGTTGCCCTGCCGATGAAACTGGTGGGGCa < 2:471016/232‑1 (MQ=255) ggtATTGCTATCGGTTTGCCTATTGCCTGGGCACTGTTGTTGTGCGGGGCGGCGTTAATG‑TTCTGGC‑TGGACATGTTTGATGTCCAG‑ATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGTGAAA‑TCATGAATTCGGGCGGCTTGTCCAAACGCCTTGTTGACCTGCCGCTGAAACTGGTGGGGCATTAACCAAGCgg > 1:1446171/1‑239 (MQ=255) ggtATTGCTATCGGTTTGCCTATTGCCTGGGCACTGTTGTTGTGCGGGGCGGCGTTAATG‑TTCTGGC‑TGGACATGTTTGATGTCCAG‑ATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGTGAAA‑TCATGAAAGCGGGCGGCTTGTCAAAAAGCCTTTTTGACCTGCCGAGGAAACTGGTGGGGGCTAAAACAGGCgg > 1:1256752/1‑239 (MQ=255) ggtATTGCTATCGGTTTGCCTATTGCCTGGGCACTGTTGTTGTGCGGGGCGGCGTTAATG‑TTCTGGC‑TGGACATGTTTGATGTCCAG‑ATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGGGAAA‑ACATGAAATCGGGGGGGTTTTCAAAAAGCATTTTTTGCCTGCCGGTGGAACTGGGGGGGGATAAAACAAGCgg > 1:194245/1‑239 (MQ=255) gtATTGTTATGTGTTTCACTATTGCCTGGGCTCTGTTGTTGTGCGGGGCGGCTTTAATT‑TTCTGGC‑TGGACAGTTTTGATTGCAAG‑ATTATGCCACAAGCGCTGGTGAGAGGAGCAGATATCTTCTCCCTGCTGGATATTGCGTTTTTTGTGCTGGGGTGGGAAA‑CTATGCTCGGGGGCGGTTGCGCAAAACGCGTTTTGGACCTGCCGATGAATCTGGTGGGGCATAAACCAGGCggg < 2:1016262/239‑1 (MQ=255) tATTGCTATCGGTTTGCCTATTGCCTGGGCACTGTTGTTGTGCGGGGCGGCGTTAATG‑TTCTGGC‑TGGACATGTTTGATGTCCAG‑ATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGGGAAA‑ACATGAATGCGGGCGGCTTGTCAAAACGCATTGTTTGACTGCCGGGGGAACTGGGTGGGGATTAACCCggggggg > 1:717720/1‑238 (MQ=255) gtttGCTTTTGTTTTGCCTTTTCCGTGGGCACTGTTGTTGTGGGGGGCGGGTTTAATG‑TTCTGGC‑TGGACATGTTTGATGTCCAG‑ATCATGGCACAAACGCTGGTGACCGGAGCCGATAGCTTCTCCCTGCTGGCGTTTCCGTTCTTTGTGCTGGGGGGTGAAA‑TCATGAATGCGGGGGGTTTGTCAAACCGCTTTTTTGCCCTGCCGATGAAACTGGTGGGGCATAAACCAGGCgggc < 2:566770/237‑1 (MQ=255) ttGCTATCGGTTTGCCTATTGCCTGGGCACTGTTGTTGTGCGGGGCGGCGTTAATG‑TTCTGGC‑TGGACATGTTTGATGTCCAG‑ATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGGGAAA‑TCATGAATGCGGGGGGCTTGTCAAAACGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAAACAGGCgggg‑tg > 1:334331/1‑239 (MQ=255) gCCTATTGCCTGGGCACTGTTGTTGTGCGGGGCGGCGTTAATG‑TTCTGGC‑TGGACATGTTTGATGTCCAG‑ATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGGGGAA‑ACATGAATGCGGGGGGCTTGTCAAAAAGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGG‑TGGGCGACGTCGGCg > 1:1023419/1‑239 (MQ=255) ggggCATTGTTGTTGGGGGGGGCGGCTTAAATG‑TTCTGGC‑TGGACATTTTTGATGTCCAG‑ATCATGCCACAAACGTTGGTAAACGGGGCCGATAGCTTCTCCCTGCGGGCGTTTCCTTTTTTTTTGTTGGCGGGTAAAA‑TCATGAATGCGGGCGGCTTGTAAAAACGCATTGTTGCCCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGC‑TGGGCTACGTCGGCGTGCTGGCAGc < 2:194245/238‑1 (MQ=255) gggCACTTTTGTTGGGGGGGGCGTCGTAAATG‑TT‑TGGCGTGTACATTGTTTATGCCCAG‑ATCATGGCACAACCGCTGGTGAACGGGGCCGATGGCTTCCCCCGGCGGGCGTTTCCGTTTTTTGTGCGGGGGGGTGAAA‑TCATGAAGGGGGGGGGTTTGTCAAACCGCATTGTGGCCCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGC‑TGGGCTACGTCGGCGTGCTGGCAGc < 2:178354/238‑1 (MQ=255) ccattgtgttttGGGGGGGGGGGTTTATGTTTCTGGT‑GGGACTTTTTTGATGCCCAG‑TTGTTGGCACAAACGTGGGGGAACGGAGCCGATAGTTTCTCCCTGGGGGCGATTCCGTTTTTTGTGGTGGGGGGTAAAA‑TCAGGAAGGCGGGGGGTTTGTCAAAACGAATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGC‑TGGGCTACGTCGGCGTGCTGGCAGCTa < 2:1513335/232‑1 (MQ=255) tgttgttgtGCGGGGCGGCGTTAATG‑TTCTGGC‑TGGACATGTTTGATGTCCAG‑ATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGTGAAA‑TCATGAATGCGGGCGGCTTGTCAAAACGCATTGTTGACCTGCCGATGAAACTGGGGGGGCATAAACCAGGCGGGC‑TGGGGTACGTCCGCGTGCCGGCAGGTa‑ttatt > 1:1023704/1‑239 (MQ=255) ttgttgtGCGGGGCGGCGTTAATG‑TTCTGGC‑TGGACTTGTTTGATGCCCAG‑ATCATGGCCCAACCGCTGGTGAAGGGAGCCGATAGCTTCCCCCTGCTGGCGATTCCGTTTTTTGTGCTGGCGGGTAAAA‑TCATAAATGCGGGGGGTTTGTCAAAACGCATTGTTGCCCTGCCGATGAAACTGGTgggg < 2:1154066/189‑1 (MQ=255) tgttgtGCGGGGCGGCGTTAATG‑TTCTGGC‑TGGACATGTTTGATGTCCAG‑ATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGTGAAA‑TCATGAATGCGGGCGGCTTGTCAAAACg < 1:1503251/157‑1 (MQ=255) gggCGGCGTTAATG‑TTCTGGC‑TGGACATGTTTGATGTCCAG‑ATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGTGAAA‑TCATGAATGCGGGCGGCTTGTCAAAACGCATTGTTGACCTGCCGAGGGAAATGGTGGGGGATAAAACAg > 1:1154066/1‑189 (MQ=255) ggcggcGTTAATG‑TTCTGGC‑TGGACATGTTTGATGTCCAG‑ATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGTGAAA‑TCATGAATGCGGGGGGCCTGTCAAAAAGCCtttttgtt > 2:1503251/1‑155 (MQ=255) ttCTGGC‑TGGACATGTTTGATGTCCAG‑ATCATGGCACAACCGCTGGTGAACGGAACCGAGAGCTTCTCCCTGCTGGCGATCCCGTTCTTTGTGCTGGCGGGTGAAA‑TCATGAATGCGGGCGGCTTGTCAAAGCGAATTGTTAACCTGCCGATGAAACtggtg < 1:1113463/162‑1 (MQ=255) gc‑tggACATGTTTGATGTCCAG‑ATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGTGAAA‑TCATGAATGCGGGCGGCTTGTCAAAACGCATTGTTGACCTGc < 1:1011733/143‑1 (MQ=255) gACATGTTTGATGTCCAG‑ATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGTGAAA‑TCATGAATGCGGGCGGCTTGTCAAAACg > 2:992893/1‑125 (MQ=255) gACATGTTTGATGTCCAG‑ATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGTGAAA‑TCATGAATGCGGGCGGCTTGTCAAAACg < 1:992893/125‑1 (MQ=255) tttGATGTCCAG‑ATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGGGAAA‑TCATGAATGCGGGGGGCTTGTCAAAACGCATTTTTGTCCTGCCGGTTAAACt > 2:1011733/1‑143 (MQ=255) atggcccAG‑ATACTGCCAAAAACGTGGGTGAACGGGCCCGATGTTTTCTCCTTGGTGGCG‑TTCCTGTTTTTGGGCGGGGGGGGGAAATTAATGAGGGCGGGGGGTTTGAAAAACCGTTGTGTTGCCCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGC‑TGGGCTACGTCGGCGTGCTGGCAGCTA‑TGATTATGGCGAG‑CCTTTCTGGTTCTGCCG‑TTGCGGATACCGCCGCCGt < 2:334331/234‑1 (MQ=255) tCCAG‑ATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGTGAAA‑TCATGAATGCGGGCGGCTTGTCa < 1:1125208/107‑1 (MQ=255) cAG‑ATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGGGAAA‑TCATGAATGCGGGGGGGCTGTCAAAACCCCTTGTTGAGCTGCCGATGAAAATGGTGGGGGATAAACCAGGCGGGG‑CGGGGTCAGTCGGGGTGCGGGGGGCTATTGGTTATGGGGGG‑CCTTTCTGGTTTTCCCT‑TGGGGGAGAccggcgccgggcgcc > 2:55487/1‑233 (MQ=255) g‑ATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGGGAAA‑TCATGAATGCGGGCGGCTTGTCAAAACGCATTGTTTACCTGCCGATGAAACTGGTGGGGGATAAACCAGGCGGGC‑TGGGCCACCTCGGCGGGCGGGCAGCTA‑TGATTATTGCGGG‑GCCTTCCTGTTCTGCCG‑GTGCGGGTACCGCCGCCGCTggccgc > 2:1306000/1‑233 (MQ=255) cATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGGGGAA‑TCATGAATGCGGGCGGCTTGTCAAAACCCATTGTTGACCTGCCGATGAAACTGGGGGGGCATAAAACAAGCGGGC‑GTGGGTACGCCGGCGCGCTGGCGGCTA‑TGATTTTGTCGAGCCCTTTTTGGTT‑TGCCC‑TGGTGCGGACCGCCGCCGCTGCCGcg > 2:198171/1‑234 (MQ=255) ggCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGTGAAA‑TCCTGCATGCGGGCGGCGTGTTCAAACGCCTTGTTGAACTGCCCGTGAAACTGGCGGGGCCTAAACCCGGCGGGCGTGGGC‑CCCTCCCGGGGCCGGGAGGCG‑TGATTATTGCGGG‑GCCTTCCGGTTTTGCCGTTTGCGGATCCCCCCACCGTTGCCGCCCTAcgt > 2:613943/1‑237 (MQ=255) cacaAGCGCGGGTGACCGAAGCCGATAACTTCCCCCGGCTGGCGTTTCCTTTTTTGGTGCTGGCGGGTAAAA‑TCATAAATGGGGGGGGCTTGTAAAAACGCATTGTTGACCTGCCGATGAAACtggtg < 2:1225710/128‑1 (MQ=255) ggTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGGGAAA‑ACATGAATGCGGGCGGGTTGTCAAAACGCCTTGTTGTACTCCCGATGAAACTGGTGGGGCATAAAc > 1:1225710/1‑128 (MQ=255) tgctgGCGATTCCGTTCTTTGTGCTGGCGGGTGAAA‑TCATGAATGCGGGCGGCTTGTCAAAACGCATTGTTGCCCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGC‑TGGGCTACGTCGGCGTGCTgg < 1:462266/132‑1 (MQ=255) tcccGTTTTTTGTGCGGGCGGGTGAAA‑TCATGAAGGGGGGGGGTTTGTCAAACCGCTTTGTTGCCCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGC‑TGGGCTACGTCGGCGTGCTGGCAGCTA‑TGATTATGGCGAG‑CCTTTCTGGTTCTGCCG‑TTGCGGATACCGCCGCCGTTGCCGCTCTACTGGTGCCGA‑TGATGCGCAGCGCCAACTATCCGGTCAACCGGGCGGCgggg < 1:198171/237‑1 (MQ=255) tagatggggggcgtCTTGCAAAACCGCTTTTTTACCCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGC‑TGGGCTACGTCGGCGTGCTGGCAGCTA‑TGATTATGGCGAG‑CCTTTCTGGTTCTGCCG‑TTGCGGATACCGCCGCCGTTGCCGCTCTACTGGTGCCGA‑TGATGCGCAGCGCCAACTATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGcc < 1:1283601/231‑1 (MQ=255) tGAATGCGGGCGGCTTGTCAAAACGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGC‑TGGGCTACGTCGGCGTGCTGGCAGCTA‑TGATTATGGCGAG‑CCTTTCTGGTTCTGCCG‑TTGCGGATACCGCCGCCGTTGCCGCTCTACCGGGGCCGAGGGATG‑GCCGCGCCAACTATCCGGTCAACCGGGGGGGGGGGCTGGATGCCTCTGGGGGCCTTTTCGCGCCa > 2:1544722/1‑239 (MQ=255) gAATGCGGGCGGCTTGTCAAAACGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGC‑TGGGCTACGTCGGCGTGCTGGCAGCTA‑TGATTATGGCGAG‑CCTTTCTGGTTCTGCCG‑GTGCGGATACCGCCGCCGGTGCCGCTCTACCGGGGCCGA‑TGATGCGCCGCGCCCACTATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCCGGCGGCCTTATCGCGccca > 2:1437773/1‑237 (MQ=255) tGCGGGGGGCTGGAAAAACCGCTTTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGC‑TGGGCTACGTCGGCGTGCTGGCAGCTA‑TGATTATGGCGAG‑CCTTTCTGGTTCGGCCG‑TTGCGGATACCGCCGCCGTTGCCGCTCTACTGGTGCCGA‑TGATGCGCAGCGCCAACTATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAatta < 1:613943/239‑1 (MQ=255) gcggcTTGTCAAAACGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGC‑TGGGCTACGTCGGCGTGCTGGCAGCTA‑TGATTATGGCGAG‑CCTTTCTGGGTCTGCCG‑TTGCGGATACCGCCGCCGTTGCCGCTCTACTGGTGCCGA‑TGATGCGCAGCGCCAACTATCCGGGCAACCGGGCGGCGGGGCTGGTTGCCTCTGGCGGGCTTTTCGCGCCCATTATTcc > 2:853003/1‑238 (MQ=255) | GCTTAATCATGGCTGTGCTGATTTTTCTGGGCTGTCTGTTGGGTGGTATTGCTATCGGTTTGCCTATTGCCTGGGCACTGTTGTTGTGCGGGGCGGCGTTAATG‑TTCTGGC‑TGGACATGTTTGATGTCCAG‑ATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGTGAAA‑TCATGAATGCGGGCGGCTTGTCAAAACGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGC‑TGGGCTACGTCGGCGTGCTGGCAGCTA‑TGATTATGGCGAG‑CCTTTCTGGTTCTGCCG‑TTGCGGATACCGCCGCCGTTGCCGCTCTACTGGTGCCGA‑TGATGCGCAGCGCCAACTATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCC > NC_000913/3744796‑3745255 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |