| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 433,649 | 0 | T | G | 46.4% | 20.0 / 19.8 | 60 | G65G (GGT→GGG) | ribD | fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5‑amino‑6‑(5‑phosphoribosylamino) uracil reductase |
| Reads supporting (aligned to +/- strand): ref base T (8/22); new base G (17/9); total (28/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.58e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.00e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GAAGAGATCGCGCGCCTGGAGGACTAAGCCGTGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCG‑AA‑TGTCGGGTGCGTCATTGTCAAAGATGG‑CGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAGCAATTGAATAAAGGCTTTCTC > NC_000913/433425‑433871 | gaggagaCCGGGCGCCGGGAGGACTAAGCCGTGCAGGACGAGTATTACATGGCGGGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTCCCCCGCATCCCAACCCG‑AA‑TGTCGGGTGCGTCATTGTCAAAGAGGG‑CGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTAGGGC‑GGGTAAAAAACCCAAAGGTGCGACCGCCTATGt < 2:1094889/236‑1 (MQ=255) aggagaGCGCGCGCCTGGGGAACGAAGCCGTGCAGGAGGAGTATTACATGGGGCGGGCGCTAAAGCTGGCGCAACGGGGACGTTTTCCCACGCATCCCAACCCG‑AA‑TGTCGGGTGCGTCATTGTCAAAGATGG‑CGAAATTGTCGGGGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACCCGCGTTGCGTATGGC‑GGGTGAAAAAGCCAAAGGTGCGACCGCCTATGt < 2:288539/236‑1 (MQ=255) ggacggcgcgcCGGGAGGACCAACCCGGGCAGGACGAGTATTACAGGGCGCGGGCGCAAAAGCGGGCGCAACGAGGAGTTTTTACCACGCATCCCAACCCG‑AA‑TGGCGGGGGGGTAATTGTAAAAGATGG‑CAAAATTGTGGGTGAAGGTTACCCCCAACGGGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTAGGGC‑GGGTAAAAAAGCAAAAGGTGCGACCGc < 2:1042659/224‑1 (MQ=255) gcCTGGAGGACTAAGCCGTGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCG‑AA‑TGTCGGGTGCGTCATTGTCAAAGATGG‑CGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAAcc < 1:927703/238‑1 (MQ=255) ccTGGAGGACTAAGCCGTGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCG‑AA‑TGTCGGGTGCGTCATTGTCAAAGATGG‑CGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTGAAAAAACCCAAAGGGCGACCGCCTATGTcaca > 1:1042659/1‑229 (MQ=255) tGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCG‑AA‑TGTCGGGTGCGTCATTGTCAAAGATGG‑CGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTGAAAAAGACAAAGAGGTGAACCCCCATTGCACACCCGCACCCCGTAGCCCTCATgttggt > 1:1091920/1‑234 (MQ=255) tGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCG‑AA‑TGTCGGGTGCGTCATTGTCAAAGATGG‑CGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGGGAAAAAACCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGt > 1:902372/1‑239 (MQ=255) gTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCG‑AA‑TGTCGGGTGCGTCATTGTCAAAGATGG‑CGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTGAAAAAGCCAAAGGGGCGACCGCCCATGTCACACTCGAAACCCGTAGCCATCATGGTCGTACGCCAc > 1:1071804/1‑236 (MQ=255) gTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCG‑AA‑TGTCGGGTGCGTCATTGTCAAAGATGG‑CGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGCGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGGGAAAAAGCCAAAAGGGCGACCGCCTATGTCACACTCGAACCCCGTAGCCAACATGGGCGTACGCcccccg > 1:18482/1‑237 (MQ=255) ttttACAGGGCGGGGGCGCAAAAGCGGGCGCACGGAGGTCGTTTTCCCACGCACCCCACCCCG‑AA‑TGTGGGGTGCGTAATTGCAAAAGATGG‑CAAAATTGTCGGTGAAGGTTACCACCAGCGGGCGGGTAAACCACATGCCGAAGTCCCCGCGTTGCGTAGGGG‑GGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCcatcat < 2:1000915/220‑1 (MQ=255) aTTACAGGGCGGGGGCGCTAAAGCGGGGGAAAGGAGGACTTTTTACCACGCACCCCACCCCG‑AA‑TGTCGGGGGCGTCATTGTCAAAGATGG‑CAAAATTGTCGGGGAAGGTTACCACCAACGGGGGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTGAAAAAGCAAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTg < 2:221713/238‑1 (MQ=255) agggCGCGGGCACAAAAGCTGGCCCAACGAGGACTTTTTCCCACGCACCCCACCCCG‑AA‑GGTCGGGTGCGTCATTGTAAAAGATGG‑CGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTAAACCACATGCCAAATTACACGCGTTGCGTAGGGG‑GGGTAAAAAAGCAAAGGGGGCGACCGCCTATGTCACACTCGAACCCTGTAGCcatcat < 2:70071/214‑1 (MQ=255) ggCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCG‑AA‑TGTCGGGTGCGTCATTGTCAAAGATGG‑CGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGGAAAAAACCAAAGG‑GCGACCCCCCACATCTCACCCCCAACCCGCAGCCCTCAAGGTCGTACGCCACCggcccgttac > 2:688885/1‑229 (MQ=255) ggCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCG‑AA‑TGTCGGGTGCGTCATTGTCAAAGATGG‑CGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGGGAAAAAGACAAAGGGGGGACCGCCCAAGTCACCACCGAACCCCGTAg > 1:1477806/1‑207 (MQ=255) ggCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCG‑AA‑TGTCGGGTGCGTCATTGTCAAAGATGG‑CGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGGGAAAAAACCAAAGGTGCGACCGCCCATGTCACAACCGAACCCTGTAGCCATCATGGGCGTACGCCACCGGGCTGTGAc > 1:258871/1‑238 (MQ=255) cgcgGGCGCTAAGGCGGGCGCAACGAGGACGTTTTACCACGCATCCCACCCCG‑AA‑TGTCGGGTGCGTCATTGTCAAAGATGG‑CGAAATTGTCGGTGAAGGTTACCCCCAACGTGCGGGTGAACCACATGCCGAAGTCCACGCGTTGCGTATGGC‑GGGTGAAAAAGCCAAGGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATgg < 2:223653/214‑1 (MQ=255) cgcgGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCG‑AA‑TGTCGGGTGCGTCATTGTCAAAGATGG‑CGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTGAAAAAACCAAAAGGGCGACCGCCCATTTTACCCTCGAACCCCGGAGCCATCATGGGCGGAccc > 1:1000915/1‑220 (MQ=255) cgcgGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCG‑AA‑TGTCGGGTGCGTCATTGTCAAAGATGG‑CGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGGGAAAAAGCCAAAAGGGCGACCGCCCATGTCACACTCGAACCCTGTAGCCATCCTGGTCGTACGCCACCGTGCTGTGACgg > 1:1035009/1‑237 (MQ=255) cgcgGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCG‑AA‑TGTCGGGTGCGTCATTGTCAAAGATGG‑CGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGCGGAAAAGACCAAAGAGCGACCGCCCATTTCACACTCGAACCCTGTAGCCACCATGGGCGCACTCCACCGCGCtctgtggc > 2:251123/1‑234 (MQ=255) cgcTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCG‑AA‑TGTCGGGTGCGTCATTGTCAAAGATGG‑CGAAATTGTCGGTGAAGGTTACCCCCAACGTGCGGGTGAACCACATGCCAAAGTACACGCGTTGCGTATGGC‑GGGTAAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGa < 1:907199/190‑1 (MQ=255) cgcTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCG‑AA‑TGTCGGGTGCGTCATTGTCAAAGATGG‑CGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGGGAAAAAACCAAAGGGGCGACCGCCTATTTCACACCCGAACCCCGTAGCCATCATGGGCGTACGc > 1:70071/1‑216 (MQ=255) aaaGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCG‑AA‑TGTCGGGTGCGTCATTGTCAAAGATGG‑CGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTGAAAAAACCAAAGGTGGGACCGCCTATGTCACACTCGAAACCTGTAGCCACCATGGTCGGACGCCACCCTGCGGTGACGCCCTCaccacc > 1:1495544/1‑233 (MQ=255) aaaGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCG‑AA‑TGTCGGGTGCGTCATTGTCAAAGATGG‑CGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGGGGAAAAACCAAAAGGGCGACCGCCCATGTCCCACTCGAACCCCGTAGGCCTCATGGTCGTAAGCCa > 1:223653/1‑214 (MQ=255) tttccccgccATCCC‑ACCCG‑AAGTGTCGGGTGCTTCATT‑TTAAAGGTGGCCAAAATTGTCGGTGATGTTTCCCACCACCGGGGGGGTGACCCACATGCCGAAGTCCACGCGTTGCGTATGGC‑GGGTAAAAAAGCAAAGGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGc < 2:1438577/230‑1 (MQ=255) tttccaccgcccccAACCCGAAA‑GGTGGGGTGGTTCATGGTAAAAGGGGG‑CGAAATTGTCGGGGAGGGTTACCCCCAACGGGGGGGTAACCCAAAGGCCGAATGCCCCGCGTTGCGTAGGGG‑GGGTAAAAAACCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGc < 2:1492409/228‑1 (MQ=255) cATCCCAACCCG‑AA‑GGTGGGGTGCGTAATTGTAAAAGATGG‑CAAAATTGCCGGTGAAGGTTCCCACCACGGTGCGGGTGACCCACAGGCCGAAGTACCCGCGTTGCGTATGGC‑GGGTAAAAAAGCAAAGGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCa < 2:258871/239‑1 (MQ=255) tCCCAACCCG‑AA‑TGTCGGGTGCGTCATTGTCAAAGATGG‑CGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATgg < 1:97617/171‑1 (MQ=255) cccAACCCG‑AA‑TGTCGGGTGCGTAATTGTCAAAGATGG‑CGAAATTGTCGGTGAAGGTTCCCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAgc < 1:389440/215‑1 (MQ=255) aCCCG‑AA‑TGTCGGGTGCGTCATTGTCAAAGATGG‑CGAAATTGTCGGTGAAGGTTCCCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTAAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCt < 1:1442660/239‑1 (MQ=255) aa‑TGTCGGGTGCGTCATTGTCAAAGATGG‑CGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGGGAAAAAACCAAAAGGGGGGCCGCCCTAGTCCCACTCGAAACCCGTAACCCTCATGGGCGTGAGCCa > 2:97617/1‑171 (MQ=255) a‑TGTCGGGTGCGTCATTGTCAAAGATGG‑CGAAATTGCCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGGGAAAAAGGCAAAAGTGCGAACCCCCATGTCACACTCGAACCCTGTAGCCATCAATGGCGTACCCCCCCGTGCCGTGACGCACTCATCCCCCCCCGCGCGGCGCGCGCGGTTGCCCCGCTGCAAAATCCTAAccc > 2:911937/1‑238 (MQ=255) tgccAAAGATGG‑CGAAATTGTCGGTGAAGGTTCCCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCAc < 1:1140425/167‑1 (MQ=255) aaaGGTGG‑CGAAATGGTGGGTGAAGGTTCCCACCGACGTGCGGGCGAACCACAGGCCGAAGTACCCGCGTGGCGTATGGG‑GGGTGAAAAAGCCAAAGGTGCGCCCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACt < 2:18482/239‑1 (MQ=255) gg‑CGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGGGAAAAAGCCAAAGGTGCGACCGCCTATGTCAAAATCGAACCCTGGAGCCATCATGGGCGGACGCCCCCGCGCTGTGGCGCCCTCCTcgcccc > 2:1140425/1‑168 (MQ=255) cGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTGAAAAAGCCAAAAGGGCGACCGCCTCTGTCCCCCTCTAACCCCGTAGCCCTCAAGGGCGGTCGCCACCGTGCCTGGACGCACTCACTCCCGCCGGCGCAGCGCGCGTGGGTGCCCCCCTGCAAGAACCTCACCCCCCGGTCGCCggggcggggctct > 2:784248/1‑223 (MQ=255) aaTTGTCGGTGAAGGTTACCCCCAACGTGGGGGTAAACCACATGCCGAAGTCCACGCGTTGCGTATGGC‑GGGTGAAAAAGCAAAAGGGGCGACCGCCTATGTCACACTCGAACCCTGTa < 2:128558/119‑1 (MQ=255) gggaagagtttACCCCCAGCGTGCGGGTGACCCACAGGCAAAAGTACACGCTTTGCTTAGGGG‑GGATAAAAAAGAAAAAGGCCGCACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAgg < 2:1321206/230‑1 (MQ=255) gAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGGGAAAAAGCCCAAGGGGCGACCGCCCATGTCACACTCGAACCCTGTAGCCCTCATgg > 1:128558/1‑119 (MQ=255) gTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTGGCGTAGGGC‑GGGTGAAAAAGCCAAAGGGGCGACCGCCTATGTCACACTCGAACCCTGTa < 1:1305236/105‑1 (MQ=255) cccaccaACGTGCGGGTGACCCACATGCCGAAGTACCCGCGTTGCGTATGGC‑GGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATgg < 1:526287/111‑1 (MQ=255) aCGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATgg < 2:1496431/105‑1 (MQ=255) aCGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTGAAAAAACCAAAAGCGGGACCGCCCATGTCCCACTCGGACCCCCGAGCCATCAAgg > 2:1305236/1‑105 (MQ=255) aCGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGGGAAAAAGCCAAAGGGGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATgg > 1:1496431/1‑105 (MQ=255) ggTGGGGGTCAACCATACGCGAAATTCCCCGGGTGGCGTAGGGG‑GGGAAAAAAAGCAAAGGGGGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCa < 2:1275275/238‑1 (MQ=255) cGTGCGGGTGAACCACAGGCCAAAGTCCACGCGTTGCGTATGGC‑GGGTGAAAAAGCCAAAGGGGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCa < 2:1102462/170‑1 (MQ=255) tGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGGGAAAAAGCCAAAAGGGCGACCGCCCATGTCACACTCGAACCCTGTAGCCATCATGGGCGTACGccc > 2:526287/1‑111 (MQ=255) gtaaaCCACATGCCAAAGTACACGCGTTGCGTAGGGC‑GGGTAAAAAAGCCAAAGGGGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATgg < 2:1392494/94‑1 (MQ=255) aaCCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAAc > 1:1102462/1‑170 (MQ=255) cacaTGCCGAAGTACGCGCTTTGCGTAGGGC‑GGGGAAAAAAGCAAAAGGGGCGACCGCCTATGTCACACGCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCtgatg < 1:713147/236‑1 (MQ=255) cacaTGCAGAAGTACGCGCGTTGCGTATGGC‑GGGTGAAAAAGCCAAAGGGGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCa < 1:1202867/157‑1 (MQ=255) tGCCGAAGTACACGCGTTGCGTATGGC‑GGGGGAAAAAGCCCAAGGTGCGACCGCCCATTTCACACCCGAACCCTGTAGCCATTATGGGCGTACGCCa > 1:1392494/1‑97 (MQ=255) acggtttGCGTAGGGG‑GGGTAAAAAGGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAGCaa < 1:672496/234‑1 (MQ=255) acGCGTTGCGTATGGC‑GGGTGAAAAAGCCAAAGGTGCGa < 1:274492/39‑1 (MQ=255) gTTGCGTATGGC‑GGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTg < 1:1082469/87‑1 (MQ=255) gTTGCGTATGGC‑GGGTGAAAAAGCCAAAGGGGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTg > 2:1082469/1‑87 (MQ=255) tGCGTATGGC‑GGGTAAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCt < 1:1228678/129‑1 (MQ=255) gCGTATGGC‑GGGTGAAAAAGCCCAAGGTGCGACCGCCTCTGTCACACCCCGACCCTGTAGCCCTCATGGTCGTACGCCCCCGTGCTGTGACCCCCCCCTCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGCTGCAAGATCCCAACCCGCAGGTCGCTGGGCGTGGGCTTTACCGTCCGCAACAGGCTGGCCTTGACGTCAGCCCCGGCCCGGTGTTTGGCGAAGCCGCGGAATTTAATa > 2:979070/1‑239 (MQ=255) gCGTATGGC‑GGGGGAAAAAACCAAAGGGGCGACCGCCCCTGTCACACCCGAAACCTGTAGCCACCCTGGTCGTACGCCACCGGGCTGGGACGCACTCATCCCCCCTGGCGTAGCGCGCGTGGTTGCCTCGATGCCAAATCCCAACCCGCAGGTCGCTGGGCGGGGGCTTTACCGTCGCCAACAGGCTGGCAATGACGCCGCCCACGGCCTGCTGTTGAGTGAAACCGAGCGATTgcaaa > 2:843549/1‑235 (MQ=255) gggggTAAAAACGCCAAGGGGGCGCCCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGCACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAGCAATTGAATAAAGGCt < 2:1495544/236‑1 (MQ=255) gggAAAAAACCAAAGGGGCGACCCCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGGCGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGGTGCAAGATCCTAACCCGCCGGTCGCCGGGCGGGGGCTTTACCGTCCGCCACACGCTGGCATTGACGTCAGCCACCGCCCGCTGATTGGGGAAGCCGGGCAATTGAATAAAGGCTTtttc > 2:1516994/3‑239 (MQ=255) | GAAGAGATCGCGCGCCTGGAGGACTAAGCCGTGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCG‑AA‑TGTCGGGTGCGTCATTGTCAAAGATGG‑CGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAGCAATTGAATAAAGGCTTTCTC > NC_000913/433425‑433871 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |