| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,818,151 | T→C | 7.2% | intergenic (‑16/+47) | argZ ← / ← argY | tRNA‑Arg/tRNA‑Arg |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,818,151 | 0 | T | C | 7.2% | 261.2 / 8.1 | 83 | intergenic (‑16/+47) | argZ/argY | tRNA‑Arg/tRNA‑Arg |
| Reads supporting (aligned to +/- strand): ref base T (44/33); new base C (2/4); total (46/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
AAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGC > NC_000913/2817918‑2818384 | aaGAGATGGTGCATCCGGGAGGATTACCCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGGGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTActg < 1:503083/239‑1 (MQ=255) agagATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGGAAAACTTATTCTActg < 2:159378/239‑1 (MQ=255) aTGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGGGGATATGGGGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGGTCGTAGCCGAGTACTCTATCCAGCTGAGCTC‑CGGATGCATCTGG‑CAATTTATTTTTATGCT‑Ga‑‑t > 2:164906/1‑239 (MQ=17) tGGTGCATCCGGGAGGATTCCTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTActgct < 1:164906/235‑1 (MQ=255) tGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGGGCATCCGGGAGGATTCGAACCTCCGACCGCCCGGTTCGTAGCCGAGAACACTATCCAGCTGGGCTA‑CCGATGGTTCGGG‑GAACTTACTTTACTGCA‑Gact > 2:819545/1‑237 (MQ=17) gTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTActg > 1:701147/1‑231 (MQ=255) gTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTActg < 2:701147/231‑1 (MQ=255) cggaggcaTTTCTCGCTTTGCGGCCCGCACTGGGTGCCGATGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCg < 2:803413/232‑1 (MQ=17) cTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGGGTACTCTATTCAGCCGAGCCT‑CGGAGGCAATGGG‑GAAATTATTTTTATACTGGA‑‑TATGAATA‑CGCTACTAAAAcccaatt > 2:879201/1‑234 (MQ=17) tGCGGCGCGCCCTGCGGGCCGTTGCTAAAGCAACGTTATCATCCCTGGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCaa < 1:1099737/239‑1 (MQ=255) tCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCCATCTCTTCGATACCTTCCTTGCTGGAGATTTTGGAGAATATTGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCGGCTGAGCGA‑CGGAGGCATCGGG‑GAATTTATTTTa > 2:907223/1‑197 (MQ=17) cctttGCTAATGCAACGTTATCATCCCTAGTGCCTGCGTTTAATTCCGCTACATCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAACTTACTTTACTGCA‑GATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCa < 2:1004621/235‑1 (MQ=14) gTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCAt > 2:623244/1‑235 (MQ=255) tGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTa < 1:571150/220‑1 (MQ=255) tGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTa > 2:571150/1‑220 (MQ=255) tGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGgga < 2:908642/239‑1 (MQ=255) tGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAACTTACTTTACTGCA‑GATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCgg > 1:1004621/1‑239 (MQ=14) aCGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAACTTACTTTACTGCA‑GATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGAttact < 1:819545/239‑4 (MQ=14) ccTAGTGCCTGCGGTTAATTCCGTTACCTCGTCGATCCCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCt < 2:21551/239‑1 (MQ=255) ccTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCt < 1:879201/239‑1 (MQ=255) ccTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCt < 1:623244/239‑1 (MQ=255) tggTGCCTGCGGTTAATACCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATAc < 2:1056113/172‑1 (MQ=255) tggTGCCTGCGGTTAATACCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATAc > 1:1056113/3‑174 (MQ=255) tAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CTGATGCATCGGG‑AATTTTATTTTACTGCT‑GC‑‑TATTGATCCCGCTACTCAAGCCATATCACGTAAGAGATGGTGCATCCGGGAGGATTCGAATCTCCGCCCGCTCg > 1:542768/1‑239 (MQ=17) aGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCg > 2:751209/1‑175 (MQ=255) aGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCg < 1:751209/175‑1 (MQ=255) aGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGc > 1:477803/1‑235 (MQ=255) ccTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCg > 1:525427/1‑239 (MQ=255) ccTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCg > 1:854612/1‑239 (MQ=255) tGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCata < 1:591120/183‑1 (MQ=255) tGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCata > 2:591120/1‑183 (MQ=255) tGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGt > 2:144422/1‑199 (MQ=255) tGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGt < 1:144422/199‑1 (MQ=255) tGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGt > 1:21551/1‑238 (MQ=255) tGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTa > 1:122110/1‑239 (MQ=255) tttAATGCCGTTACCTCTGCGATCCCTTCATTGCGGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGcc < 2:122110/237‑1 (MQ=255) tAATTCCGCTACCTCTGCGATCCCTTCATTGCTGAAGTTTCCGGAGAATAGGGTGCCACCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGa < 2:854612/238‑1 (MQ=255) gCTATCTCTTCGATACCTTCATTGCTGAAGGTTACGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGGAAAACTTATTCTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTActct > 1:955594/1‑239 (MQ=11) gCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATACGGGAGGATTCGAACCTCCGACCGCTCGGGTCGTAGCCGAGTaa > 1:753739/1‑234 (MQ=255) tatctctTCGATACCTTCATTGCTGAAGGTTACGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGGAAAACTTATTCTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTa < 1:264357/235‑1 (MQ=255) ccTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTCCTCAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGTACCTCCTACCGCCCGGTGCGTAGCCCTGCACACTATGCAGCTGAGCTACg > 2:7404/1‑239 (MQ=17) cTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACgg > 2:641857/1‑239 (MQ=255) tCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCggg < 2:1135992/177‑1 (MQ=255) tCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCggg > 1:1135992/1‑177 (MQ=255) tCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGATGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGa > 2:1244335/1‑238 (MQ=255) tCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTAGTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCTAACCTCCGACCGTTCGGTTCGAAGCGGAGTACTCTATCCAGCTCAGCTCCGAAt > 1:996968/1‑239 (MQ=17) tCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATAcc < 1:540146/136‑1 (MQ=11) aTTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCTAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACCGATGc > 1:808530/1‑239 (MQ=255) gCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATc < 1:1244335/239‑1 (MQ=255) attgatggggaaaTGTGGAGCATCCGAGAGGATGCGACCCTCTGCCGGATGGGTTCGTAGCCGAGTGTTGT‑TGCCGATGGGTTATCGTATCCGGCGGG‑AAATGTATTTTACGGTT‑GC‑‑TATTGATAACGTTACTAACGCCATATTAAGTAGAAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGaa < 2:643229/228‑1 (MQ=9) agaATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGGAAAACTTATTCTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCt > 1:348363/1‑181 (MQ=255) agaATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGGAAAACTTATTCTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCt < 2:348363/181‑1 (MQ=255) atatGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACttacttt > 2:68010/1‑236 (MQ=255) tatGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTg < 1:68010/239‑1 (MQ=255) ggTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGGAAAACTTATTCTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCa < 2:955594/239‑1 (MQ=255) tGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCt < 1:965742/171‑1 (MQ=255) gCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCTACCCTCCGACCGCTCGGTTCGTAGCCGAGTACTTTAACCAGCTGAGCTACGGATGCATCGTGCAGCttcctctactcccaatt > 2:865229/1‑232 (MQ=18) aggaTTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAg > 2:965742/1‑171 (MQ=255) cGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATAcc < 1:822356/226‑1 (MQ=255) cGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATAcc > 2:822356/1‑226 (MQ=255) tCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTa < 1:717505/239‑1 (MQ=21) ggTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGAGGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTa < 1:183348/239‑1 (MQ=255) gTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATATCCCTACTAAAGCCCTATAAAGTAAGAGATGGTGCATCTGGGAGGATTCGAACCTCCGACCGCGCGGTCCGTAGCCGAGTACTCTATCTAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGACTTTTTGATACAGCTACTACAGCCGTCTCAAGTaa > 2:183348/1‑239 (MQ=25) aGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCACGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTAACTGCCGATTTTTTGATACCCCCACTAAAGCCGTATCACGTAAGAGCTGGTGCa > 2:1055813/1‑239 (MQ=255) aGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCTAACCTCCGACCGCTCGGTTCGTAGCCGAGTCCTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTCCTTTTCTGCAGCTTTTTTGTTACCGCTATTAAAGCCGTATCAAGTAAGGGATGATGCa > 2:831902/1‑239 (MQ=37) aGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCa > 1:239729/1‑239 (MQ=255) aGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGGGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCGGAGTACTCTATCCAGCTGAGCTACGGATGGATCGGGAAACTTACTTTACTGCCGATTTTTTGATACTGCTATTAAAACCGGACAAAGTAAAAGAAGGtaga > 2:260900/1‑236 (MQ=25) gTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCa < 1:7404/238‑1 (MQ=255) tCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTAc < 1:249656/39‑1 (MQ=255) ccAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGggagga > 2:311752/1‑239 (MQ=255) cTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTc < 2:942438/97‑1 (MQ=255) cTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTc > 1:942438/1‑97 (MQ=255) cTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCTGGAGACTTACTTTACTGCAGATTCTTTGATACCGCTACTAAAGCCGTATAAACTAAGGAATGGGGGATCCGGTGGGAtac > 2:156245/1‑236 (MQ=25) cTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTTCTTTACTGCAGATTTTTTGCTAACGCTACTAAAGCCGTATCCAGTAAGAGATGCTGCATCCGGGAGGATTa > 1:596533/1‑238 (MQ=255) cTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTAt < 1:865987/207‑1 (MQ=255) cTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTAt > 2:865987/1‑207 (MQ=255) aGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGa > 2:84624/1‑123 (MQ=255) aGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGa < 1:84624/123‑1 (MQ=255) aGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCa > 2:181942/1‑174 (MQ=255) aGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCa < 1:181942/174‑1 (MQ=255) cTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TAtt > 2:249656/1‑39 (MQ=255) cTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCg > 1:833639/1‑237 (MQ=255) cTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATAGGGAGACTTACTGTAGAGTCGATTTTCTGATACCGCTACTAAAGACGTATCCAGTAAGCGAGGGCGCGTCCGTGTGGCTTACTAGc > 2:72172/1‑238 (MQ=21) ttatttTACGGCT‑GA‑‑TATTGATCCCGCTTATAAAGCAATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGc < 1:631708/239‑1 (MQ=255) tatttTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAgaga > 2:886389/1‑192 (MQ=255) tatttTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAgaga < 1:886389/192‑1 (MQ=255) | AAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA‑CGGATGCATCGGG‑AAATTTATTTTACTGCT‑GA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGC > NC_000913/2817918‑2818384 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |