| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,151,710 | 0 | C | A | 29.4% | 105.9 / 13.7 | 51 | intergenic (+64/+1) | yegJ/yegK | uncharacterized protein/ser/thr phosphatase‑related protein |
| Reads supporting (aligned to +/- strand): ref base C (22/14); new base A (15/0); total (37/14) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.54e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.37e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGG‑TTGAATTGTTGTCTTCAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATC‑CGTACG‑CTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAAC‑AATTCAGGTAATAAAT‑CGAGTTGTTCCTG‑CGTTGCTG‑CCGCCAG‑TCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCAT‑ATTTAACGCCAGTCGCTGGATACCATCCGTAAATGCTGCAACTTTGTGCGCACGCC > NC_000913/2151584‑2151946 | ccTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGG‑TTGAATTGTTTTTTTTAA‑ACGCCCTGAGAAAACCACTCTTCCCACAGCGCCCGTGCCAACGGTTTATTATAATC‑CGttag > 1:75726/1‑172 (MQ=255)ccTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGG‑TTGAATTGTTGTCTTCAA‑CCGCCATGAGAAAATCACTCTGCCCACAGCGCCAGTGCCAACGGTTTATCATCATC‑CGTACG‑CTCGTTTACCGCCGGGCTGGACAAAAAATGCTTTTAC‑AATTCAGGTAAAAAAA‑CGAgttgtt > 1:1529489/1‑237 (MQ=255) ttATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGG‑TTTAATTTTTTTCTTCTA‑CCCCCCTTGGAAAATCACCCTGCCCACCGCCCCAGTGcccaac > 1:2222521/1‑149 (MQ=255) ggTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGG‑TTTAATTTTTTTCTTCCA‑ACGCCCTTAGAAAATCACTCTTCCCCCCACGCCCAGGCCCACGTTTTATCATCATC‑CCTACC‑CTCGTTTACAGCCCGGGTGGGCACAAAATCCCTTAAC‑ACTTCAGGTAATAAAT‑CTATGTGTTCCTgag > 2:1832768/1‑233 (MQ=255) gTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGGTTTGAATT‑TTGTCTTTTA‑CCCCCCTGAGAAACTCACACTGcccccccc > 1:2196733/1‑129 (MQ=255) aCCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGG‑TTGAATTGTTGTCTTCAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTTTCATCATC‑CGTACG‑CTCGTTTACCCCCGGGCTGGAc > 1:268943/1‑185 (MQ=255) ccaaaaaaaAGAAGCCGAGAAGATAAGAGAAAAATTATTTCCCTAATCACCCTTTATTTTTTTTTTTAAAACTGGGGG‑TTAATTTTTTGTCTTCAA‑CCGCCATGAGAAactc < 1:1062124/109‑1 (MQ=255) gaagaagCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGG‑TTGAATTGTTTTCTTCAA‑CCGCCCTTAGAAACTCACTCTGCCCCCAACGCCAGTGCCCACGTTTTTTCATCATC‑CCTACG‑CTCGTTTACCGCCGGGCCGGGCCAAAAATCCTTTTAA‑AATTCAGGGAATAAAA‑CGAGTTGTTTCTT‑CGTTGCTt‑ccgcccggtccatg > 2:735320/1‑230 (MQ=255) gaagCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGG‑TTGAATTGTTGTCTTCAA‑CCGCCCTGAGAAACTCACTCTGCCca > 2:1062124/1‑112 (MQ=255) gCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGG‑TTGAATTGTTTTCTTCAA‑CCCCCATTAGAAAATCACTCTGCCCCCAGCGCCAGTGCCAACGCTTTATCCTCATC‑CCTACG‑CTCGTTTAcccc > 1:1121087/1‑155 (MQ=255) aaGAGCAAAATTAGTTCGCTAATAAGCCGTTATATTTATTGTTTAAACTGGCGG‑TTTGATTGTTTTCTTTAA‑TCCCCACGTTAAAAATACTCTCTCCCAAGGCCCAGGGCCAAAGATTTTTTAT‑ATCACCTACGCCTCG‑TTACCACCCGGCTGGGCATAAAATACTTTAAC‑CATTTAAGGAAGTAAT‑ACAGTTGTTTCTGACGTGGCTC‑CGGCCGT‑GCCTTTAAAAAATGGGGTaacga > 2:429147/1‑239 (MQ=255) aaaTTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGG‑TTGAATTTTTTTCTTCAA‑ACCCCCTGAGAAAATCACTCTTCCCCCAGCGCCCGGGGCCACGTTTTTTCATCATC‑CCTACC‑CTCGTTTACCGCCGGGCTGGACAAAAAATGCTTTTAC‑AATTTCGGGAATAAAT‑AGAGTTGTTCCTG‑CGTTTCTG‑CCGCCCC‑TCCCTTTAAAAAACGGGTGAAGAAAAGcaca > 2:2147639/1‑239 (MQ=255) gTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGG‑TTTGATTTTTTTCTTTAA‑CCGCCCTGAGAAAATCACCTTTCCCAAAGCGCCCGAGTCAAAGTTTTTTTATCTAC‑CATACG‑ACCGGTTACCCCCCGGGTGGACAAAAAAATCTTTAACAAATTATGGTAA‑AAAT‑CGAGTTGTTCCTT‑CCGTGTCT‑CCGCCAG‑TTCACTTAAAAATGGGGTCAATAAATGcacaagtgta > 2:2255945/1‑233 (MQ=255) gTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGG‑TTTAATTTTTTTCTTCCA‑ACCCCCTTTGAAAATCACTCTGCCCCCAGCGCCAGGGCCCCCGTTTTTTCCTCATC‑CCGGCG‑CTCCTTTCCCCCCCGGGTGGGCAAAAACTTCTTTTAC‑AAATTAGGGAATAAAT‑CCCGTTGTTCCTG‑CCGTTCTG‑CCGCCAG‑ACCCTTTAAAAAAGGGGTAAAGAAAGGAACACtagga > 2:1660698/1‑239 (MQ=255) gTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGG‑TTGAAATGTTGTCTTCAA‑CCGCCCAGGGAAACTCACTCTGCCCACAACGCCCGTGCCAAc > 1:2295704/1‑101 (MQ=255) cGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGG‑TTTTATTGTTGTCTTCCA‑CACCCATGCGGAACATACTCTTCCca > 1:1056369/1‑82 (MQ=255) cTAATCAGCCGTTATATTTATTGTTTAAACTGGCGG‑TTGTATTTTTTTCTTCAA‑CCGCCATGAGAAAATCACTCTGCCCCCAGCCCCAGGGCCAAAGTTTTATCATCATC‑CGTACC‑CTCGTTTTCCGCCGGGCTCGGCACAAACTGCTTTTAC‑AATTTCCGTAATAAAT‑CGAGCTGTTCCTC‑CGTTTCTT‑CCCCCGA‑CCTATTTATAAACTGGGGAAAAAAAGAC‑CATtaggaggaaat > 2:1483821/1‑234 (MQ=255) tcattATTTTTGTTGTTAAAGTTGGGGG‑TTGTGTT‑TTTTCCTCAACCCGCCATGAGAAACTCCCTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATC‑CGTACG‑CTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAAC‑AATTCAGGTAATAAAT‑CGAGTTGTTCCTG‑CGTTGCTG‑CCGCCAG‑TCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGc < 1:1936503/235‑1 (MQ=255) atatTTTTTGTTTAAACGGGCGG‑TTGAATTGTTTTCTCCAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATC‑CGTACG‑CTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAAC‑AATTCAg < 1:1581486/147‑1 (MQ=255) atatTTATTGTTTAAACTGGCGG‑TTGAATTTTTTTTTTCAA‑CCGCCCTTAGAAAATTACTCTGCCCCCAGCGCCAGTTCCAACCTTTTTTTCTCATC‑CCTACG‑CTCGTTTACCACCGGGGTGGGCAAAAACACCTTTTAC‑AATTCATGGAATTAAA‑CGCGTTTGTCCTG‑CGTTGTTC‑ACGCCAG‑GTCATTTAAAAACGGGGGAAAGAAAAGCACAATGGGGGAAATAACCACCAT‑Attt > 2:960917/1‑239 (MQ=255) tattGTTTAAACTGGCGG‑TTGAATTGTTGTTTTCAA‑CCCCCATGAGAAAATCACTCTGCCCACAGCGCCCGTGCCAACGTTTTTTTATCATT‑CCTACG‑CCCGTTTACCCCCGGGGCGGGCAAAAAACTCTTTAAC‑AATTCAGGGAATAAAA‑CGAATTGTTTCCG‑CGTTTCTG‑TCGCCAGATCATTTGAAAAACGGGTAAAAAAAAGGCA‑ATTAGGGGAATTATCCAGCAG‑ATTTAAcc > 2:1936503/1‑237 (MQ=255) tGTTTAAACTGGCGG‑TTGAATTTTTTTTTTTAA‑CCCCCCTGAGAAACTCACTCTTCCCCCAGCGCCCGTGCCAACg > 1:1238404/1‑76 (MQ=255) tGTTTAAACTGGCGG‑TTGAATTGTTTTCTTCAA‑CCCCCATTAAAAAATTACTTTTCCCACAGCGCCAGTGGCCACGGTTTTTCATCATC‑CGTACG‑CTCCTTTAACACCCGGGCGGACCAAAACTGCTTTTAC‑AATTTAAGGAATAAAA‑CCAGTTGTTTCTG‑CGTTTCTG‑CCGGCAA‑TTCATTTTAAAAAGGGGGAAAAAAAAGCACAATAGGAGAAGTATACATCAC‑AATTaaaagaca > 2:1106475/1‑233 (MQ=255) tGTTAAATCTGGTGG‑TGTATTTTTTTTTTTCAC‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATC‑CGTACG‑CTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAAC‑AATTCAGGTAATAAAT‑CGAGTTGTTCCTG‑CGTTGCTG‑CCGCCAG‑TCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCAT‑ATTTAACGCCAg < 1:884160/239‑1 (MQ=255) tttAAGCTGGCGG‑TTGGATTTTTGTTTTTAA‑CCGCCCTGAGAAAATCACCCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATC‑CGTACG‑CCCGTTTACCGCCGGGCCGGACAAAAACTGCTTTAAC‑AAATCAGGTAATAAAT‑c > 2:1581486/1‑147 (MQ=255) ttaaatcgggggg‑TTGATTTTTTTTCTCCAC‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATC‑CGTACG‑CTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAAC‑AATTCAGGTAATAAAT‑CGAGTTGTTCCTG‑CGTTGCTG‑CCGCCAG‑TCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCAT‑ATTTAACGCCAGt < 1:299007/227‑1 (MQ=255) ttAAACTGGCGG‑TTGAATTGTTGTCTTTAA‑CCGCCCTGAGAAAATCACTCTCCCCCCCACCCCAGGTCCCACGGTTTATCATTCTC‑CCGACG‑CCCGTTTTACCCCGGGGTGGACAAAAAATGCTTTTAC‑AATTTAGGGAATAAATCCGAG‑TGTTCCCT‑CGTTTCTGCCCCCCCG‑CCCTTTAAAAACCGGGGAAAAAAAAGGCCCTTG‑GGAGAAATTTTCAACATAATTTAAcccagac > 2:2208600/1‑232 (MQ=255) ttAAACTGGCGG‑TTGAATTGTTGTCTTCAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCCAAGGTTTTTCATCATC‑CGTACG‑CTCGTTTACCCCCGGGCTGGAAAAAAACTGCttttaaa > 1:1689256/1‑126 (MQ=255) gtCTTCAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATC‑CGTACG‑CTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAAC‑AATTCAGGTAATAAAT‑CGAGTTGTTCCTG‑CGTTGCTG‑CCGCCAG‑TCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCAT‑ATTTAACGCCAGTCGCTGGATCCCATCCGTaatt > 2:1598628/1‑234 (MQ=255) gtCTTCAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATC‑CGTACG‑CTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAAC‑AATTCAGGTAATAAAT‑CGAGTTGTTCCTG‑CGTTGCTG‑CCGCCAG‑TCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCAT‑ATTTAACGCCAGTCGCTGGATACCATCCGTAAAt > 1:1479866/1‑236 (MQ=255) gtCTTCAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATC‑CGTACG‑CTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAAC‑AATTCAGGTAATAAAT‑CGAGTTGTTCCTG‑CGTTGCTG‑CCGCCAG‑TCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCAT‑ATTTAACGCCAGTCGCTGGATACCATCCGTAAAt > 1:2025856/1‑236 (MQ=255) gtCTTCAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATC‑CGTACG‑CTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAAC‑AATTCAGGTAATAAAT‑CGAGTTGTTCCTG‑CGTTGCTG‑CCGCCAG‑TCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCAT‑ACTTAACGCCAGTCGCTGGATACCATCCGTAAAt > 2:2163971/1‑236 (MQ=255) ttCAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATC‑CGTACG‑CTCGTTTACCGCCGGGCTGGACaaaa > 2:2300093/1‑93 (MQ=255) ttCAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGGGCCAACGTTTTATCATCATC‑CGTACG‑CTCGTTTACCGCCGGGCTGGACaaaa < 1:2300093/93‑1 (MQ=255) tcaacccGCCATGAGAACCTCCCTCTGCCCACAGCGCAAGTGCCAACGTTTTATCATCATC‑CGTACG‑CTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAAC‑AATTCAGGTAATAAAT‑CGAGTTGTTCCTG‑CGTTGCTG‑CCGCCAG‑TCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCAT‑ATTTAACGCCAGTCGCTGGATACCATCCGTAAATGCTGCa < 1:2208600/234‑1 (MQ=255) aa‑CCGCCATGAGAAACTCACTCTGCCCACAGCGcc < 1:890630/35‑1 (MQ=255) aa‑CCGCCATGAGAAACTCACTCTGCCCACAGCGcc > 2:890630/1‑35 (MQ=255) aa‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATC‑CGTACG‑CTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAAC‑AATTCAGGTAATAAAT‑CGAGTTGTTCCTG‑CGTTGCTG‑CCGCCAG‑TCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCAT‑ATTTAACGCCAGTCGCTGGATACCATCCGTAAATGCTGCAACt > 1:10869/1‑239 (MQ=255) ccGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATC‑CGTACG‑CTCGTTTACCGCCGGGCTGGACAAAAACTGc > 1:1745632/1‑93 (MQ=255) ccGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATC‑CGTACG‑CTCGTTTACCGCCGGGCTGGACAAAAACTGc < 2:1745632/93‑1 (MQ=255) ccGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATC‑CGTACG‑CTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAAC‑AATTCAGGTAATAAAT‑CGAGTTGTTCCTG‑CGTTGCTG‑CCGCCAG‑TCCATTGaaaa < 2:95842/154‑1 (MQ=255) ccGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATC‑CGTACG‑CTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAAC‑AATTCAGGTAATAAAT‑CGAGTTGTTCCTG‑CGTTGCTG‑CCGCCAG‑TCCATTGaaaa > 1:95842/1‑154 (MQ=255) ccATGAGAAACTCCCTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATC‑CGTACG‑CTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAAC‑AATTCAGGTAATAAAT‑CGAGTTGTTCCTG‑Cg < 1:1869741/127‑1 (MQ=255) ccATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATC‑CGTACG‑CTCGTTTACCGCCGGGCTGGACAAAAACTGCttt < 1:1518815/93‑1 (MQ=255) ccATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATC‑CGTACG‑CTCGTTTACCGCCGGGCTGGACAAAAACTGCttt > 2:1518815/1‑93 (MQ=255) ccATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATC‑CGTACG‑CTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAAC‑AATTCAGGTAATAAAT‑CGAGTTGTTCCTG‑CGTTGCTG‑CCGCCAG‑TCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCAT‑ATTTAACGCCAGTCGCTGGATACCATCCGTAAATGCTGCAACTTtgt > 1:2075718/1‑238 (MQ=255) ccATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATC‑CGTACG‑CTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAAC‑AATTCAGGTAATAAAT‑CGAGTTGTTCCTG‑CGTTGCTG‑CCGCCAG‑TCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCAT‑ATTTAACGCCAGTCGCTGGATACCATCCGTAAATGCTGCAACTTtgt > 2:2280339/1‑238 (MQ=255) ccATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATC‑CGTACG‑CTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAAC‑AATTCAGGTAATAAAT‑CGAGTTGTTCCTG‑CGTTGCTG‑CCGCCAG‑TCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCAT‑ATTTAACGCCAGTCGCTGGATACCATCCGTAAATGCTGCAACTTtgt > 2:1933478/1‑238 (MQ=255) ccATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATC‑CGTACG‑CTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAAC‑AATTCAGGTAATAAAT‑CGAGTTGTTCCTG‑CGTTGCTG‑CCGCCAG‑TCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCAT‑ATTTAACGCCAGTCGCTGGATACCATCCGTAAATGCTGCAACTTtgt > 1:396961/1‑238 (MQ=255) tGAGAACCTCCCTCTGCCCACAGCGCCGGTGCCAACGTTTTATCATCTTC‑CGTACG‑CTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAAC‑AATTCAGGTAATAAAT‑CGAGTTGTTCCTG‑CGTTGCTG‑CCGCCAG‑TCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCAT‑ATTTAACGCCAGTCGCTGGATACCATCCGTAAATGCTGCAACTTTGTgcgc < 1:917596/239‑1 (MQ=255) tGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATC‑CGTACG‑CTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAAC‑AATTCAGGTAATAAAT‑CGAGTTGTTCCTG‑CGTTGCTG‑CCGCCAG‑TCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCAT‑ATTTAACGCCAGTCGCTGGATACCATCCGTAAATGCTGCAACTTTGTgcgc < 1:2147639/239‑1 (MQ=255) aacctccctcTGCCAGAAGCGCCAGTGCCAACGTTTAATCATCACC‑CTTACG‑CTCTTTTACCGCCGGGCGGGACAAAAACGGCTTTAAC‑AATTCAGGTAATAACT‑CGAGTTGTTCCTG‑CGTTGCTG‑CCGCCAG‑TCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCAT‑ATTTAACGCCAGTCGCTGGATACCATCCGTAAATGCTGCAACTTTGTGTGCACg < 2:1616368/235‑1 (MQ=255) aaCTCCCTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATC‑CGTACG‑CTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAAC‑AATTCAGGTAATAAAT‑CGAGTTGTTCCTG‑CGTTGCTG‑CCGCCAG‑TCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCAT‑ATTTAACGCCAGTCGCTGGATACCATCCGTAAATGCTGCAACTTTGTGCGCACGcc < 1:370375/239‑1 (MQ=255) actcactcTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATC‑CGTACG‑CTCGTTTACCGCCGGGCTGGACaaaaa > 2:756370/1‑77 (MQ=255) ctcactcGGCCCACAGCGCCCGTTCCAACGGTTTATCATCATC‑CGCACC‑CCCGTTTACCGTCTGGCCGTCCAAAACCTGCTTTAAC‑AGTTCAGGTAATAAAT‑CGAGTTGTTCCTG‑CGTTGCTg‑ccgc > 2:1869741/1‑127 (MQ=255) | CCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGG‑TTGAATTGTTGTCTTCAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATC‑CGTACG‑CTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAAC‑AATTCAGGTAATAAAT‑CGAGTTGTTCCTG‑CGTTGCTG‑CCGCCAG‑TCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCAT‑ATTTAACGCCAGTCGCTGGATACCATCCGTAAATGCTGCAACTTTGTGCGCACGCC > NC_000913/2151584‑2151946 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |