| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,745,019 | 0 | C | G | 43.8% | 17.3 / 26.8 | 48 | G72G (GGC→GGG) | yiaN | 2,3‑diketo‑L‑gulonate TRAP transporter large permease protein |
| Reads supporting (aligned to +/- strand): ref base C (7/20); new base G (9/12); total (16/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.37e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.44e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GCCACCGCAAGGAGCTTAATCATGGCTGTGCTGATTTTTCTGGGCTGTCTGTTGGGTGGTATTGCTATCGGTTTGCCTATTGCCTGGGCAC‑TGTTGTTGTGCGGGGCGGCGTTAATGTTCTGGCTGGACATGTTTGATGTCCAGATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGTGAAATCATGAATGCGGGCGG‑CTTGTCAAAACGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTTCTGGTTCTGCCGTTGCGGATACCGCCGCCGTTGCCGCTCTACTGGTGCCGATGATGCGCAGCGCCAACTATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGC > NC_000913/3744783‑3745245 | gCCTCCGCAAGGAGCTTAATCATGGCTGTGCTGATTTTTCTGGGCTGTCTGTTGGGTGGTATTGCTATCGGTTTGCCTATTGCCTGGGCGC‑TGTTGTTGTGCGGGGCGGCGTTAATGTTCTGGCTGGACATGTTTGATGTCCAGATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGTGAAATCATGAATgcgggcgg < 1:818867/239‑1 (MQ=255)gCCACCGCAAGGAGCTTAATCATGGCTGTGCTGATTTTTCTGGGCTGTCTGTTGGGTGGTATTGCTATCGGTTTGCCTATTGCCTGGGCAC‑TGTTGTTGTGCGGGGCGGCGTTAATGTTCTGGCTGGACATGTTTGATGTCCAGATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGGGAAATCATGAATgggggcgg > 1:946984/1‑239 (MQ=255) aaGGAGCTTAATCATGGCTGTGCTGATTTTTCTGGGCTGTCTGTTGGGTGGTATTGCTATCGGTTTGCCTATTGCCTGGGCAC‑TGTTGTTGTGCGGGGCGGCGTTAATGTTCTGGCTGGACATGTTTGATGTCCAGATCATGGCACAAACGCTGGTGAACGGCGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGTGAAATCATGAATGCGGGCGG‑CTTGTCaa < 1:768915/239‑1 (MQ=255) ttAATCATGGCTGTGCTGATTTTTCTGGGCTGTCTGTTGGGTGGTATTGCTATCGGTTTGCCTATTGCCTGGGCAC‑TGTTGTTGTGCGGGGCGGCGTTAATGTTCTGGCTGGACATGTTTGATGTCCAGATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGTGAAATCATGAATGCGGGCGG‑CTTGTCAAAACGCAt < 1:454309/239‑1 (MQ=255) tGGCTGTGCTGATTTTTCTGGGCTGTCTGTTGGGTGGTATTGCTATCGGTTTGCCTATTGCCTGGGCAC‑TGTTGTTGTGCGGGGCGGCGTTAATGTTCTGGCTGGACATGTTTGATGTCCAGATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGTGAAATCATGAATTCGGGCGG‑CTTGTCAAAACGCAttgttta > 1:1228771/1‑236 (MQ=255) tGGCTGTGCTGATTTTTCTGGGCTGTCTGTTGGGTGGTATTGCTATCGGTTTGCCTATTGCCTGGGCAC‑TGTTGTTGTGCGGGGCGGCGTTAATGTTCTGGCTGGACATGTTTGATGTCCAGATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGGGGAAACATTGATTCGGGGGGCCTTGTCAAACCGcttg > 2:794543/1‑231 (MQ=255) tGGCTGTGCTGATTTTTCTGGGCTGTCTGTTGGGTGGTATTGCTATCGGTTTGCCTATTGCCTGGGCAC‑TGTTGTTGTGCGGGGCGGCGTTAATGTTCTGGCTGGACATGTTTGATGTCCAGATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGGGAAATCATGAATGCGGGGGG‑CTTGTCCAAACGCATTGTTGa > 1:180324/1‑238 (MQ=255) cTGTGCTGATTTTTCTGGGCTGTCTGTTGGGTGGTATTGCTATCGGTTTGCCTATTGCCTGGGCAC‑TGTTGTTGTGCGGGGCGGCGTTAATGTTCTGGCTGGACATGTTTGATGTCCAGATCATGGCACAAACGCTGGTGAACGGGGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGTGAAATCATGAATGCGGGGGG‑CTTGTCAAAACGCATTGTTGACCt < 1:794543/238‑1 (MQ=255) cTGTGCTGATTTTTCTGGGCTGTCTGTTGGGTGGTATTGCTATCGGTTTGCCTATTGCCTGGGCAC‑TGTTGTTGTGCGGGGCGGCGTTAATGTTCTGGCGGGACATGTTTGATGCCCAGATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGTGAAATCATGAATGCGGGCGG‑CTTGTCAAAACGCATTGTTGACCt < 2:391720/238‑1 (MQ=255) gtgCTGATTTTTCTGGGCTGTCTGTTGGGTGGTATTGCTATCGGTTTGCCTATTGCCTGGGCAC‑TGTTGTTGTGCGGGGCGGCGTTAATGTTCTGGCTGGACATGTTTGATGTCCAGATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGGGGAATCATGCATGCGGGGGG‑CCTGTTCAAACGCATTTTTTACCttc > 1:871643/1‑236 (MQ=255) tgggtggtctgtTGGGTGGTATGGCTATCGGTTTGCTTTTTGCCGGGGCTC‑TGTGGTTGTGCGGGGGGGCGTTAATGTTCGGGCGGGACGTGTTTGATGTCCAGATCATGGCACAACCGCTGGTGAGCGGAGCCGATAGCTTCTCCCTGCGGGCGATTCCGTTCTTTGTGCTGGGGGGTGAAATCATGAATGCGGGCGG‑TTTGTAAAAACGCATTGTTGACCTGCCGATGAAACtggtg < 2:1338211/233‑1 (MQ=255) tctgtTGGGTGGTATTGCTATCGGTTTGCCTATTGCCTGGGCAC‑TGTTGTTGTGCGGGGCGGCGTTAATGTTCTGGCTGGACATGTTTGATGTCCAGATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGGGAAATCATGAATTCGGGGGG‑GTTGTCAAAACGCCCTGTTGTCCTGCCGGCGAAACTGGGGGGGCCTa > 1:310541/1‑239 (MQ=255) gtgggggTGGTGTTGCTTGTGGTTGTCCGTTTGCCGGGGCCT‑TGTTGTTGTGGGGGGCGGGGTTAATGTTCTGGCTGGACATGTTGGAGGTCCAATTCAGGGCAAAAACGTTGGTGAACGGGGCAGATAGCTTCTCCCGGCGGGCGATTCCGTTCTTTGTGCTGGCGGGGGAAATCATGAATGCGGGGGG‑CTTGTAAAAACGAATTGTTGACCTGCCGATGAAACtggt < 2:1281082/225‑1 (MQ=255) ttGGGTGGTATTGCTATCGGTTTGCCTATTGCCTGGGCAC‑TGTTGTTGTGCGGGGCGGCGTTAATGTTCTGGCTGGACATGTTTGATGTCCAGATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGTGAAATCATGAATGCGGGCGG‑Ct < 1:499809/190‑1 (MQ=255) ggtggtATTGCTCTCGGTTTGCGTATTGCCTGGGCAC‑TGTTGTTGTGCGGGGCGGCGTTAATGTTCTGGCTGGACATGTTTGATGTCCAGATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCGTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGTGAAATCATGAAGGCGGGCGG‑CTTGTCa < 1:1240614/192‑1 (MQ=255) tatggatATCGGTTTGCCTTGGGCCTGGGCTCGTGTT‑TTGTGCGGGGCGGGGTTAGTGTTGGGGCGGGACATTTTTGATGTCCAAGTCAGGGCACAACCGTGGGGGAGCGGGGCCGATAGCTTCTCCCGGCGGGGGATCCGGTTTTTTGTGCTGGCGGGGAAAATCAGGAATGCGGGGGG‑TTTGTCAAAACGCATTGTGGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCggg < 2:1234661/232‑1 (MQ=255) tATTGCTATCGGTTTGCCTATTGCCTGGGCAC‑TGTTGTTGTGCGGGGCGGCGTTAATGTTCTGGCTGGACATGTTTGATGTCCAGATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCGGCTGGCGATTCCGTTCTTTGTGCTGGCGGGTGAAATCATGAATGCGGGCGG‑CTTGTAAAAACGCATTGTTGGCCTGCCGATGAAACTGGTGGGGCATAAACCAGGCggg < 1:557543/238‑1 (MQ=255) tATTGCTATCGGTTTGCCTATTGCCTGGGCAC‑TGTTGTTGTGCGGGGCGGCGTTAATGTTCTGGCTGGACAAGTTTGATGTCCAGATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGGGAAATCCTGAATTCGGGCGG‑CTTGTCAAAACGCATTGTTTACCTGCCGGTTAAACATGTgggggctaca > 1:1281082/1‑223 (MQ=255) cGGTTTGCCTATTGCCTGGGCAC‑TGTTGTTGTGCGGGGCGGCGTTAATGTTCTGGCTGGACATGTTTGATGTCCAGATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGGGAAATTCTGAATTCGGGCGG‑CCTGTCCACACCCCTTGTTTACCCGCCGAGTGAACTGGTGGGGGATAAACACGGCgggccggggtcc > 2:1335160/1‑234 (MQ=255) ggTTTGCCTATTGCCTGGGCAC‑TGTTGTTGTGCGGGGCGGCGTTAATGTTCTGGCTGGACATGTTTGATGTCCAGATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGGGGAAACATGAATTCGGGGGG‑GTTTGCCAAAAGCACTTTTTTGCTTGCGCTGTAACTGGGGGGGGCGAAAACAGGCggggtgggggtcc > 2:963882/1‑233 (MQ=255) tGCCTGGGCAC‑TTTTGTGGTGCGGGGGGGCGTTATTGTTCTGGCTGGACATGTTTGTTGTCGAGATCGTGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGTTTCCGTTCTTTGTGCGGGCGGGTGAAATCATGAATGCGGGCGG‑TTTGTCAAAACGATTTGTTGCCCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTgg < 2:946984/239‑1 (MQ=255) gCCTGGGCAC‑TGTTGTTGTGCGGGGCGGCGTTAATGTTCTGGCTGGACATGTTTGATGTCCAGATCATGGCTCAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGGTTCCGTTCTTTGTGCTGGCGGGTGAAATCATGAATGCGGGCGG‑CTTGTCa < 1:528530/165‑1 (MQ=255) tGGGCAC‑TGTGTTTGTGGGGGGCGGCTTTAATTTTCTGGCTGGACATTTTTGATGTCCAGATCATGGCACAACCGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGTGAAATCATGAATGCGGGCGG‑CTTGTCAAAACGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGc < 1:954289/239‑1 (MQ=255) tgttgttggGGGGGGGGGCTTTAATGTTCGGGCGGGACATGTTTGAGGCCCAGATCGTGGCACAAACGCTGGTGAACGGGGCCGATAGCTTCTCCCTGCTGGCGTTTCCGTTTTTTGTGCTGGCGGGTGAAATCATGAATGCGGGCGG‑TTTGTCAAAACGCATTGTTGCCCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTgg < 2:776777/228‑1 (MQ=255) ggcggggcgggTTTATTGTTTGGGCTGGCCTTGTTTGTGGTCCAGATCATGCCACAAGGGCTGGGGAAGGGGGCTGCTAGTTTGTCCCTGCGGGCGATTCCGTTCTTTGGGCGGGCGGGGGAAATCGGGAATGGGGGGGG‑GTGGTAAAAACGCTTTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAg < 2:606829/238‑1 (MQ=255) cGGGGCGGCGTTAATGTTCTGGCTGGACATGTTTGATGTCCAGATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGGGAAATCATGAATTGGGGGGG‑CCTGTCAAAACGCATTGTTTACCTGCCGATGAAACTGGGGGGGGATAAAACAGGCGGGCTGGGCTACGCCGGCGTGCTGGGCGCTATGAt > 1:776777/1‑228 (MQ=255) ggggtgggTTAATGTTCGGGCGTGACATGTTTGTTTTCCAGTTCATGGCCAAACCGCTGGTGACCGGGGCCGGTAGCTTCTCCCTGCTGGCGTTTCCGTTCTTTGTGCTGGCGGGTGAAATCATGATTGCGGGGGG‑TTTGTCAAAACGCTTTGTTGCCCTGCCGATGAAACtggt < 2:104008/168‑1 (MQ=255) aaTGTTCTGGCTGGACATGTTTGATGTCCAGATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGTGAAATCAAGAATGCGGGGGG‑CTTGGCAAAACGCATTGTTTAACTGCCGATGAAAATGGTGGGGGATaaa > 1:104008/1‑175 (MQ=255) gctggACATGTTTGGTGTCCTGATCATGGCACAAACGCTGGTGACCGGAGCCGATAGCTTCTCCCTGCTGGCGTTTCCGTTCTTTGTGCTGGCGGGTGAAATCATAAATGCGGGCGG‑CTTGTCAAACCGCATTGTTGCCCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTa < 2:665362/183‑1 (MQ=255) tttGATGTCCAGATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGGGAAAACATGAATGCGGGCGG‑CTTGTCAAAACGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAAACAGGCGGGCCGGGGTACGgcggcggg > 1:665362/1‑181 (MQ=255) tCCAGATAATGGCACAACCGTTGTTGAAGGGGGCCGATAGCTTCCCCTTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGTAAAATCATGAATGCGGGGGG‑CTTGTCAAAACGCTTTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCt < 2:837984/185‑1 (MQ=255) cAGATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGGGAAATTATGAATGCGGGCGG‑CTTGGCAAAAAGCACTTTTGTGCTCCCGGCGAAAATGGGGGGGGCTaaa > 1:33845/1‑147 (MQ=255) gCACAACCGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGTGAAATCATGAATGCGGGCGG‑CTTGTCAAAACGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTTCTGGTTCTGCCGTTGCGGATACCGCCGCCGTTGCCGCTCTACTgg < 1:963882/238‑1 (MQ=255) acaAGCGCTGGTGAACGGAGCCGATTGCTTCCCCCGGCTGGCGTTTCCGTTTTTTGTGCGGGGGGGTAAAATCATGAATGGGGGGGG‑CTTGTCAAAACGCTTTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTTCTGGTTCTGCCGTTGCGGATACCGCCGCCGTTGCCGCTCTACTGGTGc < 1:240723/239‑1 (MQ=255) gataacgggTGAACGGGGCCGATAGCTTCTCCCTGCGGGCGATTCCGTTTTTGGTGCGGGCGGGTGAAATAATAAAGGCGGGCGG‑CTTGTAAAACCGCATTGTGGCCCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTg < 2:36200/154‑1 (MQ=255) gAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGTGAAAACATTAATGCGGGGGG‑CTTGTCAAAACGCATTGTTTACCTGCCGGTGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGGGCTGGGAGCTa > 1:36200/1‑161 (MQ=255) gggCCGATAGCTTCCCCCTGCTGGCGATTCCGTTCTTTGTGCTGGGGGGTGAAACCATGAATGCGGGGGG‑CTTGTCAAAACGCATTTTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTTCTGGTTCTGCCGTTGCGGATACCGCCGCCGTTGCCGCTCTACTGGTGCCGATGATGCGCAgcgc < 1:993941/236‑1 (MQ=255) agcggttggCTTCTCCCTGCGGGCAATTCCGTTTTTTGTGTGGGGGGGTAAAATCAGGAATGCGGGGGG‑CTTGTAAAAACGCATTGTTGGCCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTTCTGGTTCTGCCGTTGCGGATACCGCCGCCGTTGCCGCTCTACTGGTGCCGATGATGCGCAgc < 1:462104/227‑1 (MQ=255) ccGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGTGAAATCATGAATGCGGGCGG‑CTTGTCAAAACGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTTCTGGTTCTGCCGTTGCGGATAccgccgc < 1:141728/199‑1 (MQ=255) gtttCTCCCTGCGGGCGATTCCGTTCTTTGTGCTGGCGGGTGAAATCATGAATGCGGGCGG‑TTTGCAAAAACGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCg < 2:741863/130‑1 (MQ=255) cTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGTGAAATCAGGAAGGCGGGCGG‑TTTGTAAAAACGCTTTGTGGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCgggc < 2:394246/119‑1 (MQ=255) ttCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGTGAAATCATGAATGCGGGCGG‑CTTGTCAAAACGCATTGTTGACCTGc < 1:984149/85‑1 (MQ=255) gctgGCGATTCCGTTCTTTGTGCTGGCGGGGGGAATCATGAATTCGGGCGG‑CTTTTCAAAACACATTGTTGACCTGCCGGTGAAAATGGGGGGGGCTAAAACAGGCGGGGTGGGCTACGTTGGCGGGCttgg > 1:741863/1‑129 (MQ=255) ctgGCGTTTCCGTTCTTTGTGCTGGCGGGTGAAATCATGAATGCGGGGGG‑CTTGTCAAAACGCATTGTTGACCTGCCGAt < 1:666470/80‑1 (MQ=255) ctgGCGATTCCGTTCTTTGTGCTGGCGGGTGAAATCCTGAATGCGGGCGG‑CTTTTCCAAACGCCTTGTTGACCTGCCGGTGAAACTGGGGGGGGATAAACCAGGCGGGCTGGGGTACgg > 1:394246/1‑118 (MQ=255) tgGCGATTCCGTTCTTTGTGCTGGCGGGGGGAAAAATGAATGGGGGGGG‑CTTTTCAAAACGCATTGTTGGCCTGCCGATGaaaat > 2:984149/1‑83 (MQ=255) gATTCCGTTCTTTGTGCTGGCGGGTGAAATCATGAATGCGGGCGG‑TTTGTCAAAACGCTTTTTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGGGCCTTTCTGGTTCTGCCGTTGCGGATACCGCCGCCGTTGCCGCTCTACTGGTGCCGATGATGCGCAGCGCCAACTATCCGGTCAACCGGgcggcg < 1:833124/238‑1 (MQ=255) aaaTCAGGAAGGCGGGGGG‑TTTGTAAAACCGCATTGTTACCCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTTCTGGTTCTGCCGTTGCGGATACCGCCGCCGTTGCCGCTCTACTGGTGCCGATGATGCGCAGCGCCAACTATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTAt < 1:1069062/238‑1 (MQ=255) cggagagtGCGGGGGG‑TTTGTAAAAGCGGTTGTTTGCCCTGCGGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTTCTGGTTCTGCCGTTGCGGATACCGCCGCCGTTGCCGCTCTACTGGTGCCGATGATGCGCAGCGCCAACTATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATcgcg < 2:180324/232‑1 (MQ=255) cATGAAGGGGGGCGG‑TTTGTCAAACCGCATTGTTGCCCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTTCTGGTTCTGCCGTTGCGGATACCGCCGCCGTTGCCGCTCTACTGGTGCCGATGATGCGCAGCGCCAACTATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCgcgc < 1:155206/239‑1 (MQ=255) cgg‑cTTGTCAAAACGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAgg > 2:683163/1‑57 (MQ=255) cgg‑cTTGTCAAAACGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAgg > 2:652678/1‑57 (MQ=255) cgg‑cTTGTCAAAACGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAgg < 1:683163/57‑1 (MQ=255) cgg‑cTTGTCAAAACGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAgg < 1:652678/57‑1 (MQ=255) | GCCACCGCAAGGAGCTTAATCATGGCTGTGCTGATTTTTCTGGGCTGTCTGTTGGGTGGTATTGCTATCGGTTTGCCTATTGCCTGGGCAC‑TGTTGTTGTGCGGGGCGGCGTTAATGTTCTGGCTGGACATGTTTGATGTCCAGATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGTGAAATCATGAATGCGGGCGG‑CTTGTCAAAACGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTTCTGGTTCTGCCGTTGCGGATACCGCCGCCGTTGCCGCTCTACTGGTGCCGATGATGCGCAGCGCCAACTATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGC > NC_000913/3744783‑3745245 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |