Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,239,8230TG32.7% 116.8 / 10.8 56G315G (GGT→GGG) dadXalanine racemase, catabolic, PLP‑binding
Reads supporting (aligned to +/- strand):  ref base T (3/34);  new base G (18/0);  total (22/34)
Fisher's exact test for biased strand distribution p-value = 9.23e-12
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

AGTGAGATTATTGGTGTCCAGACGCTAAAAGCGGGCGAGCGTGTGGGCTACGGCGGTCGCTATACTGCGCGCGATGAACAGCGAATCGGCATTGTCGCCGCAGGGTACGCCGACGGTTATCCGCGCCACGCGCCTACCGGTACCCCTGTTTTAGTGGACGGCGTGCGCACCATGACGGTGGGGACCGTCTCGATGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGTATT‑GGTACGCCGGTTGAGCTGT‑GGGGCAAGGAGATCAAAATTGATGATGTCGCCGCCGCT‑GCCGGAACGGTGGGCTATGAGTTGATGTGCGCGCTGGCGCTACGCGTCCCGGTTGTGACGGTGTAACTTGTTGTAAGCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTG  >  NC_000913/1239587‑1240060
                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                
aGTGAGATTATTGGTGTCCAGACGCTAAAAGCGGGCGAGCGTGTGGGCTACGGCGGTCGCTATACTGCGCGCGATGAACAGCGAATCGGCATTGTCGCCGCAGGGTACGCCGACGGTTATCCGCGCCACGCGCCTACCGGTACCCCTGTTTTAGTGGACGGCGTGCGCACCATGACGGTGGGGACCGTCTCGATGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGt                                                                                                                                                                                                                                                  <  2:349116/237‑1 (MQ=255)
                                  gCGAGCGTGTGGGCTACGGCGGTCGCTATACTGCGCGCGATGAACAGCGAATCGGCATTGTCGCCGCAGGGTACGCCGACGGTTATCCGCGCCACGCGCCTACCGGTACCCCTGTTTTAGTGGACGGCGTGCGCACCATGACGGTGGGGACCGTCTCGATGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGTATT‑GGTACGCCGGTTGAGCTGT‑GGGGCAAGGAGAt                                                                                                                                                                                                             <  1:1062377/238‑1 (MQ=255)
                                    gAGCGTGTGGGCTACGGCGGTCGCTATACTGCGCGCGATGAACAGCGAATCGGCATTGTCGCCGCAGGGTACGCCGACGGTTATCCGCGCCACGCGCCTACCGGTACCCCTGTTTTAGTGGACGGCGTGCGCACCATGACGGTGGGGACCGTCTCGATGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGTATT‑GGTACGCCGGTTGAGCTGT‑GGGGCAAGGAGATCa                                                                                                                                                                                                           <  1:705633/238‑1 (MQ=255)
                                                         cGCTATACTGCGCGCGATGAACAGCGAATCGGCATTGTCGCCGCAGGGTACGCCGACGGTTATCCGCGCCACGCGCCTACCGGTACCCCTGTTTTAGTGGACGGCGTGCGCACCATGACGGTGGGGACCGTCTCGATGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGTATT‑GGTAc                                                                                                                                                                                                                                         <  1:499439/188‑1 (MQ=255)
                                                          gCTATACTGCGCGCGATGAACAGCGAATCGGCATTGTCGCCGCAGGGTACGCCGACGGTTATCCGCGCCACGCGCCTACCGGTACCCCTGTTTTAGTGGACGGCGTGCGCTCCATGACGGTGGGGACCGTCTCGATGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGTATT‑GGTACGCCGGTTGAGCTGT‑GGGGCAAGGAGATCAAAATTGATGATGTCGCCGCCGCt                                                                                                                                                                                    <  1:415480/239‑1 (MQ=255)
                                                                  gcgcgcGATGAACAGCGAATCGGCATTGTCGCCGCAGGGTACGCCGACGGTTATCCGCGCCACGCGCCTACCGGTACCCCTGTTTTAGTGGACGGCGTGCGCACCATGACGGTGGGGACCGTCTCGATGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGGGTT‑GGGAAGCCGGGTGGGCCTT‑GGGGGAAGGGGATCAAAATTGATGGTGTcgccccccgcgcccgcac                                                                                                                                                                            >  1:1124867/1‑228 (MQ=255)
                                                                   cgcgcgATGAACAGCGAATCGGCATTGTCGCCGCAGGGTACGCCGACGGTTATCCGCGCCACGCGCCTACCGGTACCCCTGTTTTAGTGGACGGCGTGCGCACCATGACGGTGGGGACCGTCTCGATGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCCGGCGGGGATT‑GGGACGCCgggttgg                                                                                                                                                                                                                               >  2:499439/1‑183 (MQ=255)
                                                                   cgcgcgATGAACAGCGAATCGGCATTGTCGCCGCAGGGTACGCCGACGGTTATCCGCGCCACGCGCCTACCGGTACCCCTGTTTTAGTGGACGGCGTGCGCACCATGACGGTGGGGACCGTCTCGATGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGGATT‑GGTACGCCGGTTGGGCTGT‑GGGGCAAGGGGATCAAAATTGATGATGTCGCCGCCGCTGGCCGGacg                                                                                                                                                                           >  1:774121/1‑237 (MQ=255)
                                                                   cgcgcgATGAACAGCGAATCGGCATTGTCGCCGCAGGGTACGCCGACGGTTATCCGCGCCACGCGCCTACCGGTACCCCTGTTTTAGTGGACGGCGTGCGCACCATGACGGTGGGGACCGTCTCGATGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGGATT‑GGGACGCCGGGTGAGCTGT‑GGGGCGAGGAGGTCAAAATTGATGTTGTCGCCGCCGCT‑GCCGGGACg                                                                                                                                                                          >  2:351870/1‑239 (MQ=255)
                                                                    gcgcgATGAACAGCGAATCGGCATTGTCGCCGCAGGGTACGCCGACGGTTATCCGCGCCACGCGCCTACCGGTACCCCTGTTTTAGTGGACGGCGTGCGCACCATGACGGTGGGGACCGTCTCGATGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGGATT‑GGTACGCCGGTTGTGCTGT‑GGGGCGAGGAGATCACAAATGATGATGTCGCCGCCCCC‑GCCCGAACgg                                                                                                                                                                         >  2:1152878/1‑239 (MQ=255)
                                                                      gcgATGAACAGCGAATCGGCATTGTCGCCGCAGGGTACGCCGACGGTTATCCGCGCCACGCGCCTACCGGTACCCCTGTTTTAGTGGACGGCGTGCGCACCATGACGGTGGGGACCGTCTCGATGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGTATT‑GGTACGCCGGTTGAGCTGT‑GGGGCAAGGAGATCAAAATTGATGATGTCGCCGCCGCT‑GCCGGAACGGt                                                                                                                                                                        <  1:1263644/238‑1 (MQ=255)
                                                                          tGAACAGCGAATCGGCATTGTCGCCGCAGGGTACGCCGACGGTTATCCGCGCCACGCGCCTACCGGTACCCCTGTTTTAGTGGACGGCGTGCGCACCATGACGGTGGGGACCGTCTCGATGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGTATT‑GGTACGCCGGTTGAGCTGT‑GGGGCAAGGAGATCAAAATTGATGATGTCGCCGCCGCT‑GCCGGAACGGTGGGCt                                                                                                                                                                   <  1:1159169/239‑1 (MQ=255)
                                                                          tGAACAGCGAATCGGCATTGTCGCCGCAGGGGACGCCGACGGTTATCCGCGCCACGCGCCTACCGGTACCCCTGTTTTAGTGGACGGCGTGCGCACCATGCCGGTGGGGACCGTCTCGATGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGCCTC‑GGGACGCCCGGTGAGGCGTGGGGGCAGGGGGTGCAAAATGGATAATTCCCCCGCCG‑T‑GCCGGCGCGGTGGGcc                                                                                                                                                                   >  2:497815/1‑238 (MQ=255)
                                                                                           ttGTCGCCGCCGGGTACGCCGACGGTTATCCGCGCCCCGGGCCTCCCGGTACCCCTGTTTTAGTGGACGGCGTGCGCACCATGACGGTGGGGACCGTCTCGATGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGTATT‑GGTACGCCGGTTGAGCTGT‑GGGGCAAGGAGATCAAAATTGATGATGTCGCCGCCGCT‑GCCGGAACGGTGGGCTATGAGTTGATGTgcgcg                                                                                                                                                  <  1:497815/239‑1 (MQ=255)
                                                                                                                  ggTTATCCGCGCCACGCGCCTACCGGTGCCCCTGTTTTAGTGGACGGCGTGCGCACCATGACGGTGGGGACCGTCTCGATGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGTATT‑GGTACGCCGGTTGAGCTGT‑GGGGCAAGGAGATCAAAATTGATGATGTCGCCGCCGCT‑GCCGGAACGGTGGGCTATGAGTTGATGTGCGCGCTGGCGCTACGCGTCCCGGTtgt                                                                                                                           <  1:1141805/239‑1 (MQ=255)
                                                                                                                    ttAGCCGCGCCACGCGCCTACCGGTACCCCTGTTTTAGTGGACGGCGTGCGCCCCATGACGGTGGGGACCGTCTCGATGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGTATT‑GGTACGCGGGTTGAGCTGT‑GGGGCAAGGAGATCAAAATTGATGATGTCGCCGCCGCT‑GCCGGAACGGTGGGCTATGAGTTGATGTgcgcg                                                                                                                                                  <  1:367959/214‑1 (MQ=255)
                                                                                                                      aTCCGCGCCACGCGCCTACCGGTACCCCTGTTTTAGTGGACGGCGTGCGCACCATGACGGTGGGGACCGTCTCGATGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGTATT‑GGTAc                                                                                                                                                                                                                                         <  1:468205/127‑1 (MQ=255)
                                                                                                                              cacggcccttgcGGTACCCGTGTGTTAGTGGACGGCGTGCGCACCAGGACGGTGGGGACCTTCTCGATGGTTATGCTGGCGGTCGATTTACCGCCTTGCCCGCAGGCGGGTTTT‑GGTGCGCCGGTTGAGCTGT‑GGGGCAAGGAGATCAAAATTGATGATGTCGCCGCCGCT‑GCCGGAACGGTGGGCTATGAGTTGATGTGCGCGCTGGCGCTACGCGTCCCGGTTGTGACGGTGTAACt                                                                                                               <  2:282360/228‑1 (MQ=255)
                                                                                                                              cACGCGCCTACCGGTACCCCTGTTTTAGTGGACGGCGTGCGCACCATGACGGGGGGGGCCGTCTCGATGGACATGCTAGCGGTCGCTTTAACGCCTTGCCCGCAGGCGGGGGTTGGGTTGTCGGGTCGGGCTAT‑GGGG‑AAGGGGTGGAAAATTGGTGGTTGCGGCCCGGCG‑GCCGGGACGGTGGGCTGTGGGGTGGGGTGGGCGCTgggggtgc                                                                                                                                        >  2:367959/1‑208 (MQ=255)
                                                                                                                                cgcgCCTACCGGTACCCCTGTTTTAGTGGACGGCGTGCGCACCATGACGGTGGGGACCGTCTCGATGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGGGTT‑GGTCAGCCGGGTGAg                                                                                                                                                                                                                               >  2:468205/1‑127 (MQ=255)
                                                                                                                                            tACCCCTGTTTTAGTGGACGGCGTGCGCACCATGACGGTGGGGACCGTCTCGATGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGTATT‑GGTACGCCGGTTGAGCTGT‑GGGGCAAGGAGATCAAAATTGATGATGTCGCCGCCGCT‑GCCGGAACGGTGGGCTATGAGTTGATGTGCGCGCTGGCGCTACGCGTCCCGGTTGTGACGGTGTAAc                                                                                                                <  1:1055860/224‑1 (MQ=255)
                                                                                                                                               cccTGTTTTAGTGGACGGCGTGCGCACCATGACGGTGGGGACCGTCTCGATGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGTATT‑GGTACGCCGGTTGAGCTGT‑GGGGCAAGGAGATCAAAATTGATGATGTCGCCGCCGCT‑GCCGGAACGGTGGGCTATGAGTTGATGTGCGCGCTGGCGCTACGCGTCCCGGTTGTGACGGTGTAACTTGTTGTAAGCCGGATCg                                                                                              <  1:443990/239‑1 (MQ=255)
                                                                                                                                                    ttttAGTGGACGGCGTGCGCACCATGACGGTGGGGACCGTCTCGATGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGTATT‑GGTACGCCGGtt                                                                                                                                                                                                                                  <  1:691932/104‑1 (MQ=255)
                                                                                                                                                          tGGACGGCGTGCGCACCATGACGGTGGGGACCGTCTCGATGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGTATT‑GGTAc                                                                                                                                                                                                                                         <  1:1204980/91‑1 (MQ=255)
                                                                                                                                                          tGGACGGCGTGCGCACCATGACGGTGGGGACCGTCTCGATGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGGATT‑GGTAc                                                                                                                                                                                                                                         >  2:1204980/1‑91 (MQ=255)
                                                                                                                                                                   tGCGCACCATGACGGTGGGGACCGTCTCGATGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGTATT‑GGTACGCCGGTTGAGCTGT‑GGGGCAAGGAGATCAAAATTGATGATGTCGCCGCCGCT‑GCCGGAACGGTGGGCTATGAGTTGATGTGCGCGCTGGCGCTACGCGTCCCGGTTGTGACGGTGTAACTTGTTGTAAGc                                                                                                     <  1:4884/212‑1 (MQ=255)
                                                                                                                                                                      gcACCATGACGGTGGGGACCGTCTCGATGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGTATT‑GGTACGCCGGTTGAGCTGT‑GGGGCAAGGAGATCAAAATTGATGATGTCGCCGCCGCT‑GCCGGAACGGTGGGCTATGAGTTGATGTGCGCGCTGGCGCTACGCGTCCCGGTTGTGACGGTGTAACTTGTTGTAAGCCGGATCGGAGGCAACGTCTTCTGGGTGCaa                                                                       <  1:1080375/239‑1 (MQ=255)
                                                                                                                                                                          cATGACGGTGGGGACCGTCTCGATGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGTATT‑GGTACGCCGGTTGAGCTGT‑GGGGCAAGGAGATCAAAATTGATGATGTCGCCGCCGCT‑GCCGGAACGGTGGGCTATGAGTTGATGTgcgcg                                                                                                                                                  <  1:145236/160‑1 (MQ=255)
                                                                                                                                                                           aTGACGGTGGGGACCGTCTCGATGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGGATT‑TGTACGCCGGTTGAGCTGT‑GGGGGAAGGAGATCAAAATTGATGATGTCGCCGCCGCT‑GCCGGGACGGTGGGGTATGAGTTGATGTGCGCGCTGGCGCTACGCGTCCCGGGTGTGGCGGGGTAACTTTTTTGAAGCCCGGTCGGGGGGCACGTCTTTTGGGGGTgaaaaaa                                                                  >  2:1341689/1‑239 (MQ=255)
                                                                                                                                                                             gACGGTGGGGACCGTCTCGATGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGGATT‑TGGACGCCCGGTGGTCTGT‑GGGGGAAAGGGATCAAAAATGATGGTGTCGCCCCCCCT‑CCCGGGACGGGGGGGCTTGAGGTGATTTGTGCGCTGGGGCCCCGCGTCCCCGGTGTGGCGGGGGAACTTGTTTTTAGTCGGGGCGGAg                                                                                           >  2:4884/1‑212 (MQ=255)
                                                                                                                                                                                           tctcGATGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGTATT‑GGTACGCCGGTTGAGCTGT‑GGGGCAAGGAGAt                                                                                                                                                                                                             <  1:449018/85‑1 (MQ=255)
                                                                                                                                                                                           tctcGATGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGTATT‑GGTACGCCGGTTGAGCTGT‑GGGGCAAGGAGATCAAAATTGATGATGTCGCCGCCGCT‑GCCGGAACgg                                                                                                                                                                         <  1:627099/120‑1 (MQ=255)
                                                                                                                                                                                           tctcGATGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGCGATT‑GGGACGCCGGGTGAGCTGT‑GGGGCAAGGAGATCAAAATTGATGATGTCGCCGCCGCC‑GCCCGGACGGGGGGGCATGTGTTTATGTGGGCGGCGGGGCTACGCGTCCCGGTTGTGGCGGGGTTACTTTTTTGAAGGCGGGTAGGGGGGCACGGCTTTTTGGGGGAAAAAAAACATCCATCCGGCTgg                                                  >  2:800465/1‑239 (MQ=255)
                                                                                                                                                                                            ctcGATGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGTATT‑GGTAACCCGGTTGAGCTGG‑GGGGCAAGGAGATCAAAATTGATGATGTCGCCGCCCCT‑GCCGGAACGGGGGGGTATGAGTTGGTGTGCGCCCTGGCGCCACGCGTCCCGGTTGTGACGGGGTAACGTGTTGTAAGCCGGATCGGAGGCCACCGCTTCTGGGGGCGAAAAAAATATACATCCCGCTgg                                                  >  2:515191/1‑238 (MQ=255)
                                                                                                                                                                                            ctcGATGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGGATT‑GGTACGCCGGGTGAGCTGT‑GGGGCAAGGAGATCAAAATTGATGATGTTGCCGCCCCT‑GCCGGGACGGGGGGGTATGGGGTGATGTGGGGCCCGGGGCCACGCGGCCCGGGTGGGGCGGGGGTACTTGTTGTAAGGCGGAGCGGGGGCAACGGCTTTTTGGGGGCAAAAAATCATCCATCCGGCgggg                                                 >  2:1363860/1‑238 (MQ=255)
                                                                                                                                                                                            atcGATGGATTGGCTAGCGGTCGATTTAACGCCTGGCCCGCAGGTGGGTATT‑GGTACGGAGGTTGAGGTGT‑GGGGCAAGGAGATCAAAATTGATGATGTCGCCGCCGCT‑GCCGGAACgg                                                                                                                                                                         <  1:596700/118‑1 (MQ=255)
                                                                                                                                                                                             tcGATGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGTATT‑GGTACGCCGGTTGAGCTGT‑GGGGCAAGGAGATCAAAATTGATGATGTCGCCGCCGCT‑GCCGGAACGGTGGGCTATGAGTTGATGTGCGCGCTGGCGCTACGCGTCCCGGTTGTGACGGTGTAACTTGTTGTAAGCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTc                                                <  1:351870/239‑1 (MQ=255)
                                                                                                                                                                                                 tGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGTATT‑GGTACGCCGGTTGAGCTGT‑GGGGCAAGGAGATCAAAATTGATGATGTCGCCGCCGCT‑GCCGGAACGGTGGGCTATGAGTTGATGTGCGCGCTGGCGCTACGCGTCCCGGTTGTGACGGTGTAACTTGTTGTAAGCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGc                                             <  1:168444/238‑1 (MQ=255)
                                                                                                                                                                                                     tatGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGGATT‑GGTACGCCGGGTGAGCTGT‑GGGGCAAGGAGATCAAAAATGATGATGTCGCCGCCGCC‑GCCGGGACGGGGGGCTATGa                                                                                                                                                               >  2:627099/1‑120 (MQ=255)
                                                                                                                                                                                                     tatGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGGATT‑GGGACGCCGGGTGAGCTGT‑GGGGGAAGGAGATCAAAATtgat                                                                                                                                                                                                   >  2:449018/1‑85 (MQ=255)
                                                                                                                                                                                                      atGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGGGTT‑GGGAAGCCGGGTGAACAGC‑GGGGCAAGGAGATCAAAATTTATGATTGCGCCGCCGCT‑GGCGGGACGGTGGGccgtaa                                                                                                                                                               >  2:596700/1‑114 (MQ=255)
                                                                                                                                                                                                          tggCGGTCGATTTAACGCCTTGCCAGCAGGGGGGTATT‑GGTACGCCGGTTGAGCTGT‑GGGGCAAGGAGATCAAAATTGATGATGTCGCCGCCGCT‑GCCGGAACGGTGGGCTATGAGTTGATGGGCGCGCTGGCGCTACGCGTCCCGGTTGTGACGGTGTAACTTGTTGTAAGCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAgtt                                   <  2:1284870/237‑1 (MQ=255)
                                                                                                                                                                                                             gggTCGATTTAACGCCTTGCCCGCAGGCGGGTATT‑GGTACGCCGGTTGAGCTGT‑GGGGCAAGGAGATCAAAATTGATGATGTCGCCGCCGCT‑GCCGGAACGGTGGGCTATGAGTTGATGTGCGCGCTGGCGCTACGCGTCCCGGTTGTGACGGTGTAACTTGTTGTAAGCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAgttgt                                 <  1:1187706/237‑1 (MQ=255)
                                                                                                                                                                                                             cGGTCGATTTAACGCCTTGCCCGCAGGCGGGGATT‑GGGACCCCGGGTGGGCTTT‑GGGGCCAGGGGATCAAAAATGATGATGTCCCCGCCCCT‑GCCGGGACGGGGGGCTATGAGTTGATGTGCGCGCTGGCCCCACGCGTCCCCGTTGTGGCGGGGTCACTTGTTGTAAGCCCGGTCGGGGGGAACGTCTTCTCGGGGCAAAAAAAACATCCCTCCGGCCGGCCACCCACCGCAgttgct                                >  2:472101/1‑237 (MQ=255)
                                                                                                                                                                                                                 cGATTTAACGCCTTGCCCGCAGGCGGGTATT‑GGTACGCCGGTTGAGCTGT‑GGGGCAAGGAGATCAAAATTGATGATGTCGCCGCCGCT‑GCCGGAACGGTGGGCTATGAGTTGATGTGCGCGCTGGCGCTACGCGTCCCGGTTGTGACGGTGTAACTTGTTGTAAGCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAAt                             <  1:1385626/238‑1 (MQ=255)
                                                                                                                                                                                                                    tttAACGCCTTGCCCGCAGGCGGGTATT‑GGTACGCCGGTTGAGCTGT‑GGGGCAAGGAGATCAAAATTGATGATGTCGCCGCCGCT‑GCCGGAACGGTGGGCTATGAGTTGAtgtg                                                                                                                                                      <  1:385913/114‑1 (MQ=255)
                                                                                                                                                                                                                          gCCTTGCCCGCAGGCGGGTATT‑GGTACGCCGGTTGAGCTGT‑GGGGCAAGGAGATCAAAATTGATGATGTCGCCGCCGCT‑GCCGGAACGGTGGGCTATGAGTTGATGTGCGCGCTGGCGCTACGCGTCCCGGTTGTGACGGTGTAACTTGTTGTAAGCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGc                   <  1:886523/239‑1 (MQ=255)
                                                                                                                                                                                                                            cTTGCCCGCAGGCGGGTTTT‑GGTACGCGGGTTGAGCTGT‑GGGGAAAGGAGATCAAAATTGATGATGTCGCCGCCGCT‑GCCGGAACGGTGGGCTATGAGTTGATGTGCGCGCTGGCGCTACGCGTCCCGGTTGTGACGGTGTAACTTGTTGTAAGCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCa                 <  2:1124867/239‑1 (MQ=255)
                                                                                                                                                                                                                              tGCCGGGAGGCGGGTATT‑GGTAGGCCGGTTGAGCTGT‑GGGGCAGGGAGATCAAAATTGATGGTGTCGCCGCCGCT‑GCCGGAACGGTGGGCTATGAGTTGATGTGCGCGCTGGCGCTACGCGTCCCGGTTGTGACGGTGTAACTTGTTGTAAGCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCAtt               <  1:686305/239‑1 (MQ=255)
                                                                                                                                                                                                                              tGCCCGCAGGCGGGTATT‑GGTATCCCGGTTTGGGTGT‑GGGGCAAGGAGGTCAAAATTGATGGTGTCCCCCCCGCT‑GCCGGGACGGGGGGCTATGAGTTGAAGTGCGCGCTCGCGCCCCGCGTCCCGGTTGTGTCGGGGGAACTTGTTGTAAGCCGGCTCGGAGGGAACGTCTTCTGGGTGCAAAAAAATCATCCATCCTGCCGGTCCGTCAATGTTGCTGTTTATGCTACagaaacat                >  2:415851/1‑233 (MQ=255)
                                                                                                                                                                                                                              tGCCCGCAGGCGGGGATT‑GGTACGCCGGGTGAGCTGT‑GGGGGAAGGAGATCAAAATTTGTGCTGTCGCCGCCGCT‑GCCGGAACGGTGGGCGATGAGTTGATGGGGGCGCCGgcg                                                                                                                                            >  2:385913/1‑114 (MQ=255)
                                                                                                                                                                                                                              tGCCCGCAGGCGGGGATT‑GGGACGCCGGTTGAGCTGT‑TGGGCAAGGAGATCAAAATTGATGATGTTGCCCCCCTC‑GGCGGAACGGGGGGGTATGAGTTGATGTGCGCGCCGGCGCCACGCGGCCCGGGTGGGACGGGGGAAATTGTTGGAAAGCGGTTTGGAGGCCACGGCTTTTGGGGGCAAAAAAATCAATCATCCCGCTGGTCAGAAACTGTAAGTGTTAATGGTACAGAGCCCtt               >  2:991139/1‑239 (MQ=255)
                                                                                                                                                                                                                               gCCCGCAGGCGGGTGTT‑GGTACGCCGGTTGGGCTGT‑GGGGAAAGGAGATAAAAATTGAGGATGTGTCCGCCGCT‑GCCGGAACGGTGGGCTATGAGTCGATGTGCGCGCTGGCGCTACGCGTCCCGGTTGTGACGGTGTAACTTGTTGTAAGCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCAGCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCAtt               <  2:548141/238‑1 (MQ=255)
                                                                                                                                                                                                                                cccGCAGGCGGGTATT‑GGTACGCCGGTTGAGCTGT‑GGGGCAAGGAGATCAAAATTGATGATGTCGCCGCCGCT‑GCCGGAACGGTGGGCTATGAGTTGATGTGCGCGCTGGCGCTACGCGTCCCGGTTGTGACGGTGTAACTTGTTGTAAGCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCAtt               <  1:794812/237‑1 (MQ=255)
                                                                                                                                                                                                                                  cGCAGGCGGGTATT‑GGTACGCCGGTTGAGCTGT‑GGGGCAAGGAGATCAAAATTGATGATGTCGCCGCCGCT‑GCCGGAACGGTGGGCTATGAGTTGATGTGCGCGCTGGCGCTACGCGTCCCGGTTGTGACGGTGTAACTTGTTGTAAGCCGGATCGGAGGCAACGTCGTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAAAGCCATTGccc           <  1:1363860/239‑1 (MQ=255)
                                                                                                                                                                                                                                   gCAGGCGGGTATT‑GGTACGCCGGTTGAGCTGT‑GGGGCAAGGAGATCAAAATTGATGATGTCGCCGCCGCT‑GCCGGAACGGTGGGCTATGAGTTGATGTGCGCGCTGGCGCTACGCGTCCCGGTTGTGACGGTGTAACTTGTTGTAAGCCGGATCGGAGGCAACGTCTGCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGGGCCATTGCCCa          <  1:1341689/239‑1 (MQ=255)
                                                                                                                                                                                                                                          ggTATT‑GGTACGCCGGGTGAGCTGT‑GGGGCAAGGAGATCAAAATTGATGATGTCGCCGCCGCT‑GCCGGGACGGGGGGCTATGAGTTGATGTGGGCGCTGGCGCTACGCGTCCCGGGTGTGACGGGGTAAATTGTTGTAAGCCGGGTCGGGGGCAACGTCCTCTGGGGGGCAAAAAATCATCCATCCGGCTGGGCAGCAAACGGAGGTGGTAAATGGACAAAGCCATTGccccttaaagc   >  2:794812/1‑231 (MQ=255)
                                                                                                                                                                                                                                            tATT‑GGTACGCCGGTTGAGCTGT‑GGGGCAGGGAGATCAAATTTGATGATGTCGCCGCCGCT‑GCCGGAACGGTGGGCTATGAGTTGATGTGCGCGCTGGCGCTACGCGTCCCGGTTGTGACGGTGTAACTTGTTGTAAGCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAgtg  <  2:409161/238‑1 (MQ=255)
                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                
AGTGAGATTATTGGTGTCCAGACGCTAAAAGCGGGCGAGCGTGTGGGCTACGGCGGTCGCTATACTGCGCGCGATGAACAGCGAATCGGCATTGTCGCCGCAGGGTACGCCGACGGTTATCCGCGCCACGCGCCTACCGGTACCCCTGTTTTAGTGGACGGCGTGCGCACCATGACGGTGGGGACCGTCTCGATGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGTATT‑GGTACGCCGGTTGAGCTGT‑GGGGCAAGGAGATCAAAATTGATGATGTCGCCGCCGCT‑GCCGGAACGGTGGGCTATGAGTTGATGTGCGCGCTGGCGCTACGCGTCCCGGTTGTGACGGTGTAACTTGTTGTAAGCCGGATCGGAGGCAACGTCTTCTGGGTGCAAAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCCATGATAGTG  >  NC_000913/1239587‑1240060

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑