| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,173,363 | Δ2 bp | intergenic (‑1/+1) | gatC ← / ← gatC | pseudogene, galactitol‑specific enzyme IIC component of PTS;transport; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system galactitol‑specific enzyme IIC/pseudogene, galactitol‑specific enzyme IIC component of PTS;transport; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system galactitol‑specific enzyme IIC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,173,361 | 0 | C | . | 94.9% | 151.1 / ‑1.4 | 39 | pseudogene (2/442 nt) | gatC | pseudogene, galactitol‑specific enzyme IIC component of PTS;transport; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system galactitol‑specific enzyme IIC |
| Reads supporting (aligned to +/- strand): ref base C (0/2); new base . (28/9); total (28/11) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.42e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| * | NC_000913 | 2,173,362 | 0 | C | . | 94.9% | 151.6 / ‑0.7 | 39 | pseudogene (1/442 nt) | gatC | pseudogene, galactitol‑specific enzyme IIC component of PTS;transport; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system galactitol‑specific enzyme IIC |
| Reads supporting (aligned to +/- strand): ref base C (0/2); new base . (28/9); total (28/11) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.42e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTG‑ATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCA‑TCGCCACGAAGAAGCCGAT‑GGTGGCAAGATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAA‑ATCAGGCTTGCCGATACCACCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATC > NC_000913/2173129‑2173589 || gccgccAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTG‑ATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCA‑TCGCCACGAAGAAGCCGAT‑GGTGGCAAGATCGCCAAAC‑GGCAGCACCTGATTACCCTGCACACAAACAGCAATTAAAATGGTTAGTGGGATCAAA‑ATCAGGCTTGCCGATaccaccga > 2:603138/1‑234 (MQ=255)gccgccAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTG‑ATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCA‑TCGCCACGAAGAAGCCGAT‑GGTGGCAAGATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTCAAATGGTGAGTGGGATAAAA‑ATCAGGCTTGCCGATaccaccgc > 1:599219/1‑234 (MQ=255) ccAATAGTTTGCGTCGCGATCCACAGGGTG‑ATGCTCATAATGATGACACCCGAGACTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCA‑TCGCCACGAAGAAGCCGAT‑GGTGGCAAGATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAA‑ATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAAAGc > 2:709199/1‑236 (MQ=255) ccAATAGTTGGCGTCGCGATCCACAGGGTG‑ATGCTCATAATGATGACCCCCGAGATTAAGGTGCGGAACAGATTCCCACGATGCACGGCGACCGCCA‑TCGCCACGAAGAAGCCGAT‑GGTGGCAAGATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAA‑ATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGc < 1:186739/236‑1 (MQ=255) ccAAGAGTTTGCGACGGAGTCCA‑TGGGTGAATTCTCAAAATGCGGACCCCAGAGTTTAAGGTGCGAAACAGATTCCCACGATGCACGGCGACCGCCA‑TCGCCACGAAGAAGCCGAT‑GGTGGCAAGATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAA‑ATCAGGCTTGCCGATCCCA‑‑CCGCCGTATGTCCCAGCAGCAACGc < 2:357857/236‑1 (MQ=255) tGCGTCGCGATCCACAGGGTG‑ATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCA‑TCGCCACGAAGAAGCCGAT‑GGTGGCAAGATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAA‑ATCAGGCTTGCCGATACCA‑‑CCGCCGGAAGTCCCAGCAGCAACGCCGGATCaat > 2:65094/1‑235 (MQ=255) cGTCGCGATCCACAGGGTG‑ATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCA‑TCGCCACGAAGAAGCCGAT‑GGTGGCAAGATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGGCAGTGGGATAAAA‑ATCAGGCTTGCCGAAACCA‑‑CCGCCGTATGTCCCAGCAGGCACGCCGGCACAAgg > 2:351895/1‑235 (MQ=255) cgcgATCCACAGGGTG‑ATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCA‑TCGCCACGAAGAAGCCGAT‑GGTGGCAAGATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAA‑ATCAGGCTTGCCGATACCA‑‑CCGCCGCATGTCCCAGAAGAAAATCCGGATCAAGGCCaa > 1:87948/1‑236 (MQ=255) agggataTGCTAATAATGATAACACAGGAGATAAGGGTGGGAAACAGATTTCCACGATGCAGGGCGACCGCCA‑TCGCCACGAAGAAGCCGAT‑GGTGGCAAGATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAA‑ATCAGGCTTGCCGATCCCA‑‑CCGCCGTATGTCCCAGCAGCAACGc < 2:255872/206‑1 (MQ=255) g‑ATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCA‑TCGCCACGAAGAAGCCGAT‑GGTGGCAAGATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAA‑ATCAGGCTTGCCGATaccaccgccgta < 1:305622/190‑7 (MQ=255) g‑ATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCA‑TCGCCACGAAGAAGCCGAT‑GGTGGCAAGATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAA‑ATCAGGCTTGCCGATaccaccgccgta > 2:305622/1‑184 (MQ=255) tGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCA‑TCGCCACGAAGAAGCCGAT‑GGTGGCAAGATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAA‑ATCAGGCTTGCCGATACCA‑‑CCGCCGCATGTCCCAGCAGCAACGCCGGATCACGGCACATCAGGAACTCCTGAccg > 2:481228/1‑236 (MQ=255) tGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCA‑TCGCCACGAAGAAGCCGAT‑GGTGGCAAGATCGCCAAAC‑GGCACCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGCGAGTGGGATAAAA‑ATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCa > 1:255872/1‑212 (MQ=255) acacCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCA‑TCGCCACGAAGAAGCCGAT‑GGTGGCAAGATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAA‑ATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACt > 1:431410/1‑229 (MQ=255) ccGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCA‑TCGCCACGAAGAAGCCGAT‑GGTGGCAAGATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAA‑ATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTaa > 1:199131/1‑235 (MQ=255) aagaTTAACGTGCGGAAAAGGTTTCCCCGGAGGCCGGCCAACGGCACTCCCCAGAAAAAAGCCAAT‑GGTGCCAAGAT‑GCCAAACGGGCAGCCCCGGATTCCCCGGCCCCAAACCAGAAATAAAATTGGGGAGTGGAAAAAAA‑ATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAAc < 2:252275/235‑1 (MQ=255) agaTTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCA‑TCGCCACGAAGAAGCCGAT‑GGTGGCAAGATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAA‑ATCAGGCTTGCCGAAACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACg > 1:345986/1‑235 (MQ=255) cGGAACAGATTTCCACGATGCACGGCGACCGCCA‑TCGCCACGAAGAAGCCGAT‑GGTGGCAAGATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAA‑ATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTg > 1:39698/1‑236 (MQ=255) tGCACGGCGACCGCCA‑TCGCCACGAAGAAGCCGAT‑GGTGGCAAGATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAA‑ATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTACACGACTACGAACCTGCTTAGCGATGGGCggtca > 2:233752/1‑232 (MQ=255) ccggtgccccgccg‑TCG‑CACGAAAGAGGCGATGGGTGCAAAGACCGCCAACG‑GGCAGCACCGGATTCCCCGACACAAAAACAGCAATTAAAATGGGGAGTGGGATAAAA‑ATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGtt < 2:402867/224‑1 (MQ=255) cACGGCGACCGCCA‑TCGCCACGAAGAAGCCGAT‑GGTGGCAAGATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAA‑ATCAGGCTTGCCGATaccaccg < 1:181033/131‑2 (MQ=255) cACGGCGACCGCCA‑TCGCCACGAAGAAGCCGAT‑GGTGGCAAGATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAA‑ATCAGGCTTGCCGATaccaccg > 2:181033/1‑130 (MQ=255) ccGCCA‑TCGCCACGAAGAAGCCGAT‑GGTGGCAAGATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAA‑ATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCatg > 1:474038/1‑236 (MQ=255) ccGCCA‑TCGCCACGAAGAAGCCGAT‑GGTGGCAAGATCACCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAA‑ATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCatg > 1:383621/1‑236 (MQ=255) cGCCACGAAGAAGCCGAT‑GGTGGCAAGATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAA‑ATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGtt > 2:562478/1‑236 (MQ=255) gCCGAT‑GGTGGCAAGATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAA‑ATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGGAAACGACTACGAGCCTGCTTAGCGATGGGCGGTAAACCATCCATGAAGGGGTTAATTACCCGTg > 2:431880/1‑236 (MQ=255) tggCAAGATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAA‑ATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCAt > 1:745851/1‑232 (MQ=255) gCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAA‑ATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTagcagc > 2:518896/1‑229 (MQ=255) aaC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAA‑ATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTgccgc > 1:390471/1‑236 (MQ=255) gcaCCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAA‑ATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAAccatcca > 1:709245/1‑186 (MQ=255) caCCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAA‑ATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGttttt > 1:315684/1‑235 (MQ=255) tatccccgggCACAAAACCAGCAATTAAAAGGGTGATTGGGAAAAAA‑ATCAGGCTTGCAGATCCCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGcc < 1:709199/228‑1 (MQ=255) caaaccAGCATTTAAAA‑GGGGAGTGGGAAAAAACATCGGGCTGGCCG‑‑ACCCCCCAGCCGTATGTCCCAGCAGCAACGCCGAATCAAGGCCAATCAGGACCTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATa < 2:431410/228‑1 (MQ=255) gCAATTAAAATGGTGAGTGGGATAAAA‑ATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAAt > 1:148421/1‑225 (MQ=255) ggTGAGTGGGATAAAA‑ATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAAt < 1:459238/162‑1 (MQ=255) ggTGAGTGGGATAAAA‑ATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAAt > 2:459238/1‑162 (MQ=255) aGTGGGATAAAA‑ATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAg > 2:270361/1‑236 (MQ=255) gggAAAAAA‑ATCAGGTTTG‑CGGTTCC‑CCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGACCTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGTGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGa < 1:535076/235‑1 (MQ=255) ggaaTAAAA‑GTCGGGCTGGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGa < 1:481228/232‑1 (MQ=255) gATAAAA‑ATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGc > 1:83249/1‑236 (MQ=255) actCAGGCTTGCCGATACCA‑‑CCGACGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATaa < 1:351895/234‑1 (MQ=255) aGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCa > 1:31570/1‑193 (MQ=255) aGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCa > 2:554650/1‑235 (MQ=255) ggCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGc > 1:134741/1‑236 (MQ=255) ccGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATATACCTTTGACATCGTAACCCCCGAGGATGCCGATAATCAGACCCAta > 2:322531/1‑235 (MQ=255) || GCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTG‑ATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCA‑TCGCCACGAAGAAGCCGAT‑GGTGGCAAGATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAA‑ATCAGGCTTGCCGATACCACCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATC > NC_000913/2173129‑2173589 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |